Nucleotide Global Alignment
Description
- Query:
- TRCN0000469079
- Subject:
- XM_011542241.3
- Aligned Length:
- 1770
- Identities:
- 1393
- Gaps:
- 333
Alignment
Query 1 ATGTCGTGGCTCTTCGGCATTAACAAGGGCCCCAAGGGTGAAGACGCGGGGCCGCCGCCGCCTTTGCCGCCCGC 74
||||||||||||||||||.||||||||||||||||||||||||.||||||||||||||||||||||||||||||
Sbjct 1 ATGTCGTGGCTCTTCGGCGTTAACAAGGGCCCCAAGGGTGAAGGCGCGGGGCCGCCGCCGCCTTTGCCGCCCGC 74
Query 75 GCAGCCCGGGGCCGAGGGCGGCGGGGACCGCGGCTTGGGAGACCGGCCGGCGCCCAAGGACAAATGGAGCAACT 148
|||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GCAGCCCGGGGCCGAGGGCGGCGGGGACCGCGGTTTGGGAGACCGGCCGGCGCCCAAGGACAAATGGAGCAACT 148
Query 149 TCGACCCCACCGGCCTGGAGCGCGCCGCCAAGGCGGCGCGCGAGCTGGAGCACTCGCGTTATGCCAAGGACGCC 222
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||.|||
Sbjct 149 TCGACCCCACCGGCCTGGAGCGCGCCGCCAAGGCGGCGCGCGAGCTGGAGCACTCGCGTTACGCCAAGGAGGCC 222
Query 223 CTGAATCTGGCACAGATGCAGGAGCAGACGCTGCAGTTGGAGCAACAGTCCAAGCTCAAAGAGTATGAGGCCGC 296
|||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CTGAATCTGGCGCAGATGCAGGAGCAGACGCTGCAGTTGGAGCAACAGTCCAAGCTCAAAGAGTATGAGGCCGC 296
Query 297 CGTGGAGCAGCTCAAGAGCGAGCAGATCCGGGCGCAGGCTGAGGAGAGGAGGAAGACCCTGAGCGAGGAGACCC 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CGTGGAGCAGCTCAAGAGCGAGCAGATCCGGGCGCAGGCTGAGGAGAGGAGGAAGACCCTGAGCGAGGAGACCC 370
Query 371 GGCAGCACCAGGCCAGGGCCCAGTATCAAGACAAGCTGGCCCGGCAGCGCTACGAGGACCAACTGAAGCAGCAG 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GGCAGCACCAGGCCAGGGCCCAGTATCAAGACAAGCTGGCCCGGCAGCGCTACGAGGACCAACTGAAGCAGCAG 444
Query 445 CAACTTCTCAATGAGGAGAATTTACGGAAGCAGGAGGAGTCCGTGCAGAAGCAGGAAGCCATGCGGCGAGCCAC 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CAACTTCTCAATGAGGAGAATTTACGGAAGCAGGAGGAGTCCGTGCAGAAGCAGGAAGCCATGCGGCGAGCCAC 518
Query 519 CGTGGAGCGGGAGATGGAGCTGCGGCACAAGAATGAGATGCTGCGAGTGGAGGCCGAGGCCCGGGCGCGCGCCA 592
||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||
Sbjct 519 CGTGGAGCGGGAGATGGAGCTGCGGCACAAGAATGAGATGCTGCGAGTGGAGACCGAGGCCCGGGCGCGCGCCA 592
Query 593 AGGCCGAGCGGGAGAATGCAGACATCATCCGCGAGCAGATCCGCCTGAAGGCGGCCGAGCACCGTCAGACCGTC 666
|||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||
Sbjct 593 AGGCCGAGCGGGAGAATGCAGACATCATCCGCGAGCAGATCCGCCTGAAGGCGTCCGAGCACCGTCAGACCGTC 666
Query 667 TTGGAGTCCATCAGGACGGCTGGCACCTTGTTTGGGGAAGGATTCCGTGCCTTTGTGACAGACTGGGACAAAGT 740
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||
Sbjct 667 TTGGAGTCCATCAGGACGGCTGGCACCTTGTTTGGGGAAGGATTCCGTGCCTTTGTGACAGACCGGGACAAAGT 740
Query 741 GACAGCCACGGTGGCTGGGCTGACGCTGCTGGCTGTTGGGGTCTACTCAGCCAAGAATGCCAC-GCTTGTCGCC 813
||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||.|| || .|||.|.
Sbjct 741 GACAGCCACGGTGGCTGGGCTGACGCTGCTGGCTGTCGGGGTCTACTCAGCCAAGAATGCGACAGC-CGTCACT 813
Query 814 GGCCGCTTCATCGAGGCTCGGCTGGGGAAGCCGTCCCTAGTGAGGGAGACGTCCCGCATCACGGTGCTTGAGGC 887
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||
Sbjct 814 GGCCGCTTCATCGAGGCTCGGCTGGGGAAGCCGTCCCTAGTGAGGGAGACGTCCCGCATCACGGTGCTGGAGGC 887
Query 888 GCTGCGGCACCCCATCCAGGTCAGCCGGCGGCTCCTCAGTCGACCCCAGGACGCGCTGGAGGGTGTTGTGCTCA 961
|||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||.|
Sbjct 888 GCTGCGGCACCCCATCCAGGTCAGCCGGCGGCTCCTCAGTCGACCCCAGGACGTGCTGGAGGGTGTTGTGCTTA 961
Query 962 GTCCCAGCCTGGAAGCACGGGTGCGCGACATCGCCATAGCAACAAGGAACACCAAGAAGAACCGCAGCCTGTAC 1035
|||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||..||||||||
Sbjct 962 GTCCCAGCCTGGAAGCACGGGTGCGCGACATCGCCATAGCAACCAGGAACACCAAGAAGAACCGGGGCCTGTAC 1035
Query 1036 AGGAACATCCTGATGTACGGGCCACCAGGCACCGGGAAGACGCTGTTTGCCAAGAAACTCGCCCTGCACTCAGG 1109
|||.||||||||.||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1036 AGGCACATCCTGCTGTATGGGCCACCAGGCACCGGGAAGACGCTGTTTGCCAAGAAACTCGCCCTGCACTCAGG 1109
Query 1110 CATGGACTACGCCATCATGACAGGCGGGGACGTGGCCCCCATGGGGCGGGAAGGCGTGACCGCCATGCACAAGC 1183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1110 CATGGACTACGCCATCATGACAGGCGGGGACGTGGCCCCCATGGGGCGGGAAGGCGTGACCGCCATGCACAAGC 1183
Query 1184 TCTTTGACTGGGCCAATACCAGCCGGCGCGGCCTCCTGCTCTTTGTGGATGAAGCGGACGCCTTCCTTCGGAAG 1257
|||||||||||||||||||||||||||||||||||||||||||..||||||||||.||||||||||||||||||
Sbjct 1184 TCTTTGACTGGGCCAATACCAGCCGGCGCGGCCTCCTGCTCTTCATGGATGAAGCAGACGCCTTCCTTCGGAAG 1257
Query 1258 CGAGCCACCGAGAAGATAAGCGAGGACCTCAGGGCCACACTGAACGCCTTCCTGTACCGCACGGGCCAGCACAG 1331
||||||||.|||.||||||||.||||||||||.|||||||||||||||||||||||||.||.||||||.|||||
Sbjct 1258 CGAGCCACTGAGGAGATAAGCAAGGACCTCAGAGCCACACTGAACGCCTTCCTGTACCACATGGGCCAACACAG 1331
Query 1332 CAACAAGTTCATGCTGGTCCTGGCCAGCAACCAACCAGAGCAGTTCGACTGGGCCATCAATGACCGCATCAATG 1405
|||||| || |||| ||| ||..|||
Sbjct 1332 CAACAA------------CC---CCAG-----------------------------TCA-----CGTGTCA--- 1353
Query 1406 AGATGGTCCACTTCGACCTGCCAGGGCAGGAGGAACGGGAGCGCCTGGTGAGAATGTATTTTGACAAGTATGTT 1479
||| |||||| .|||||
Sbjct 1354 --------CAC-----------------GGAGGA-----------------------------TCAAGT----- 1368
Query 1480 CTTAAGCCGGCCACAGAAGGAAAGCAGCGCCTGAAGCTGGCCCAGTTTGACTACGGGAGGAAGTGCTCGGAGGT 1553
||| ||||| ||||..||
Sbjct 1369 -----------------------------CCT---GCTGG--------------------------TCGGCCGT 1384
Query 1554 CGCTCGGCTGACGGAG------GGCATGTCGGGCCGGGAGATC---GCTCAGCTG--GCCGTGTCCTGGCAGGC 1616
||||||| ||||.||.|||| || |.||||||| ||||| .|
Sbjct 1385 -----GGCTGAC----TCTTCAGGCACGTTGGGC-------TCCTGGGTCAGCTGCTGCCGT----------TC 1432
Query 1617 CACGGCGTATGCCTCCGAGGACGGGGTCCTGACCGAGGCCATGATGGACACCCGCGTGCAAGATGCTGTCCAGC 1690
.||| ||| |||| |||.||
Sbjct 1433 GACG--------CTC------------CCTG---GAGCCC---------------------------------- 1449
Query 1691 AGCACCAGCAGAAGATGTGCTGGCTGAAGGCGGAAGGGCCTGGGCGTGGGGACGAGCCCTCCCCATCC 1758
Sbjct 1450 -------------------------------------------------------------------- 1449
