Nucleotide Global Alignment
Description
- Query:
- TRCN0000469129
- Subject:
- XM_011512235.1
- Aligned Length:
- 3193
- Identities:
- 1765
- Gaps:
- 1409
Alignment
Query 1 ATGGGGGAGATAGAAGGAACATACAGAGTCCTGCAGACTGCAGGGATGCGCTTGGGTGCCCAGACCCCTGTGGG 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 AGTTAGCACCCTTGAGCCTGGGCAGACTCTCTTGCCCAGAATGCAAGAGAAGCACCTGCACCTCAGAGTAAAGC 148
.
Sbjct 1 -------------------------------------------------------------------------A 1
Query 149 TGCTGGACAA-----CACCATGGAAATATTTGACAT-TGAGCCTAAATGCGATGGCCAGGTATTACTGACACAA 216
||.|| || ||||.|..||..|.|| || |.|||||||||||||||||||||||||||||||||||
Sbjct 2 TGTTG---AATTGCCCACCTTTTAATAACTT---ATGTCAGCCTAAATGCGATGGCCAGGTATTACTGACACAA 69
Query 217 GTGTGGAAGCGTTTAAACCTGGTAGAATGTGACTACTTCGGGATGGAGTTTCAAAATACTCAGTCCTACTGGAT 290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 70 GTGTGGAAGCGTTTAAACCTGGTAGAATGTGACTACTTCGGGATGGAGTTTCAAAATACTCAGTCCTACTGGAT 143
Query 291 TTGGCTTGAACCTATGAAACCCATCATTAGGCAAATACGAAGGCCAAAGAATGTGGTGCTTCGCCTAGCTGTAA 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 144 TTGGCTTGAACCTATGAAACCCATCATTAGGCAAATACGAAGGCCAAAGAATGTGGTGCTTCGCCTAGCTGTAA 217
Query 365 AATTTTTTCCACCTGATCCTGGTCAGCTACAAGAAGAATATACAAGATACTTGTTTGCCTTGCAACTTAAGAGA 438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 218 AATTTTTTCCACCTGATCCTGGTCAGCTACAAGAAGAATATACAAGATACTTGTTTGCCTTGCAACTTAAGAGA 291
Query 439 GACCTGCTGGAAGAGCGTTTGACCTGTGCTGACACCACAGCGGCCCTTCTCACGTCCCATCTCCTGCAGTCGGA 512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 292 GACCTGCTGGAAGAGCGTTTGACCTGTGCTGACACCACAGCGGCCCTTCTCACGTCCCATCTCCTGCAGTCGGA 365
Query 513 AATAGGAGATTACGATGAAACGCTGGACCGAGAGCACCTCAAAGTGAACGAGTATTTGCCTGGCCAGCAGCACT 586
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 366 AATAGGAGATTACGATGAAACGCTGGACCGAGAGCACCTCAAAGTGAACGAGTATTTGCCTGGCCAGCAGCACT 439
Query 587 GCCTTGAGAAGATACTAGAATTCCATCAGAAGCACGTGGGCCAGACACCTGCTGAGTCGGATTTCCAGGTGCTC 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 440 GCCTTGAGAAGATACTAGAATTCCATCAGAAGCACGTGGGCCAGACACCTGCTGAGTCGGATTTCCAGGTGCTC 513
Query 661 GAAATTGCTCGAAAGTTGGAAATGTACGGCATCAGATTTCACATGGCTTCTGACAGGGAAGGAACCAAGATTCA 734
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 514 GAAATTGCTCGAAAGTTGGAAATGTACGGCATCAGATTTCACATGGCTTCTGACAGGGAAGGAACCAAGATTCA 587
Query 735 ACTGGCAGTTTCCCACATGGGTGTACTCGTGTTCCAGGGCACCACCAAAATCAACACTTTCAACTGGTCCAAGG 808
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 588 ACTGGCAGTTTCCCACATGGGTGTACTCGTGTTCCAGGGCACCACCAAAATCAACACTTTCAACTGGTCCAAGG 661
Query 809 TCCGTAAACTAAGCTTCAAGAGGAAAAGATTTCTTATCAAACTTCATCCAGAGGTTCATGGACCTTACCAGGAC 882
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 662 TCCGTAAACTAAGCTTCAAGAGGAAAAGATTTCTTATCAAACTTCATCCAGAGGTTCATGGACCTTACCAGGAC 735
Query 883 ACATTAGAATTTTTGTTGGGTAGTAGAGATGAATGTAAGAACTTCTGGAAGATTTGTGTGGAGTATCACACCTT 956
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 736 ACATTAGAATTTTTGTTGGGTAGTAGAGATGAATGTAAGAACTTCTGGAAGATTTGTGTGGAGTATCACACCTT 809
Query 957 TTTTAGACTTTTGGACCAACCTAAGCCAAAAGCAAAAGCCGTCTTCTTCAGCCGGGGCTCCTCCTTCAGATACA 1030
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 810 TTTTAGACTTTTGGACCAACCTAAGCCAAAAGCAAAAGCCGTCTTCTTCAGCCGGGGCTCCTCCTTCAGATACA 883
Query 1031 GTGGAAGAACTCAGAAACAACTAGTAGATTATTTCAAAGACAGTGGAATGAAGAGAATTCCATATGAAAGAAGG 1104
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 884 GTGGAAGAACTCAGAAACAACTAGTAGATTATTTCAAAGACAGTGGAATGAAGAGAATTCCATATGAAAGAAGG 957
Query 1105 CACAGCAAGACCCACACGTCCGTTCGAGCTCTGACTGCAGACCTACCAAAACAGAGCATCTCATTCCCCGAGGG 1178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 958 CACAGCAAGACCCACACGTCCGTTCGAGCTCTGACTGCAGACCTACCAAAACAGAGCATCTCATTCCCCGAGGG 1031
Query 1179 ATTGAGGACTCCTGCCTCCCCATCTTCAGCGAATGCCTTTTACTCGCTCTCTCCCTCCACTCTGGTCCCCTCTG 1252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1032 ATTGAGGACTCCTGCCTCCCCATCTTCAGCGAATGCCTTTTACTCGCTCTCTCCCTCCACTCTGGTCCCCTCTG 1105
Query 1253 GCCTGCCAGAGTTTAAGGACAGCAGCAGCTCCCTCACAGATCCCCAGGTTTCCTACGTCAAGAGTCCAGCTGCA 1326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1106 GCCTGCCAGAGTTTAAGGACAGCAGCAGCTCCCTCACAGATCCCCAGGTTTCCTACGTCAAGAGTCCAGCTGCA 1179
Query 1327 GAGAGGCGCAGTGGAGCAGTGGCTGGAGGCCCCGACACACCATCGGCCCAGCCCCTCGGGCCCCCCGCACTCCA 1400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1180 GAGAGGCGCAGTGGAGCAGTGGCTGGAGGCCCCGACACACCATCGGCCCAGCCCCTCGGGCCCCCCGCACTCCA 1253
Query 1401 GCCTGGTCCAGGCCTTTCCACGAAGAGTCCTCAGCCTTCTCCCTCCAGCCGGAAGAGCCCCCTGAGTCTGAGCC 1474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1254 GCCTGGTCCAGGCCTTTCCACGAAGAGTCCTCAGCCTTCTCCCTCCAGCCGGAAGAGCCCCCTGAGTCTGAGCC 1327
Query 1475 CTGCATTTCAGGTGCCTTTGGGCCCAGCTGAACAGGGCTCATCCCCACTCCTGAGCCCTGTCCTCAGTGATGCT 1548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1328 CTGCATTTCAGGTGCCTTTGGGCCCAGCTGAACAGGGCTCATCCCCACTCCTGAGCCCTGTCCTCAGTGATGCT 1401
Query 1549 GGCGGAGCCGGGATGGACTGCGAGGAGCCCAGACACAAGCGCGTGCCTGCAGACGAGGCCTACTTCATAGTCAA 1622
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1402 GGCGGAGCCGGGATGGACTGCGAGGAGCCCAGACACAAGCGCGTGCCTGCAGACGAGGCCTACTTCATAGTCAA 1475
Query 1623 AGAGATTCTCGCTACAGAACGAACATACCTCAAGGATTTAGAAGTTATTACCGTGTGGTTCCGCAGCGCAGTGG 1696
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1476 AGAGATTCTCGCTACAGAACGAACATACCTCAAGGATTTAGAAGTTATTACCGTGTGGTTCCGCAGCGCAGTGG 1549
Query 1697 TGAAGGAGGACGCCATGCCTGCGACTCTGATGACGCTGCTCTTCTCCAACATCGATCCCATCTATGAGTTCCAC 1770
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1550 TGAAGGAGGACGCCATGCCTGCGACTCTGATGACGCTGCTCTTCTCCAACATCGATCCCATCTATGAGTTCCAC 1623
Query 1771 AGAGGCTTCCTGCGCGAGGTGGAGCAGAGGCTGGCACTCTGGGAAGGGCCCTCCAAAGCCCACACAAAAGGCAG 1844
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1624 AGAGGCTTCCTGCGCGAGGTGGAGCAGAGGCTGGCACTCTGGGAAGGGCCCTCCAAAGCCCACACAAAAGGCAG 1697
Query 1845 TCATCAACGAATCGGGGACATCCTGCTCAGGAACATGCGCCAGTTAAAGGTGTT--CCAGCT-CCACGAAGGGC 1915
||||||||||||||||||||||||||||||||||||||||||||||||||.||| |||||| |..|.||.|.|
Sbjct 1698 TCATCAACGAATCGGGGACATCCTGCTCAGGAACATGCGCCAGTTAAAGGAGTTTACCAGCTACTTCCAAAGAC 1771
Query 1916 ATGTAGCA-GGGGTC---ACAAAAATGGAG-------------------------------------------- 1941
||| | |.|||| |||.||.||||.
Sbjct 1772 ATG----ACGAGGTCCTAACAGAACTGGAAAAGGCTACCAAACGCTGTAAGAAGTTGGAGGCAGTGTACAAGGA 1841
Query 1942 -------------------------------------------------------------------------- 1941
Sbjct 1842 GTTTGAGCTGCAGAAGGTCTGCTACTTGCCTCTCAACACGTTCCTGCTGAAGCCCATCCAGCGGCTGCTGCACT 1915
Query 1942 -------------------------------------------------------------------------- 1941
Sbjct 1916 ACCGCCTGCTGCTGCGCCGCCTATGCGGACATTACAGCCCCGGGCACCATGACTACGCTGACTGCCATGACGCC 1989
Query 1942 -------------------------------------------------------------------------- 1941
Sbjct 1990 CTGAAAGCCATCACAGAGGTGACCACCACACTACAGCACATTCTCATCCGGCTGGAGAACCTGCAGAAGCTAAC 2063
Query 1942 -------------------------------------------------------------------------- 1941
Sbjct 2064 GGAGCTGCAGCGGGACCTGGTGGGCATAGAGAACCTCATTGCTCCTGGCAGGGAGTTCATCCGTGAGGGCTGCC 2137
Query 1942 -------------------------------------------------------------------------- 1941
Sbjct 2138 TTCACAAGCTCACCAAGAAGGGCCTGCAGCAGAGGATGTTTTTTCTGTTCTCAGATATGTTGCTGTACACAAGC 2211
Query 1942 -------------------------------------------------------------------------- 1941
Sbjct 2212 AAAGGAGTTGCAGGGACCAGCCACTTCCGGATCCGGGGCCTCCTTCCCCTCCAAGGCATGCTGCTAATAGTGCT 2285
Query 1942 -------------------------------------------------------------------------- 1941
Sbjct 2286 GGACCCCCCGGTGGAAGAAAGTGATAACGAGTGGTCTGTTCCACACTGTTTCACCATCTACGCGGCTCAGAAAA 2359
Query 1942 -------------------------------------------------------------------------- 1941
Sbjct 2360 CAATCGTGGTGGCAGCCAGCACTCGGCTGGAGAAAGAGAAGTGGATGCTGGACCTGAACTCCGCGATCCAAGCA 2433
Query 1942 -------------------------------------------------------------------------- 1941
Sbjct 2434 GCCAAGAGTGGCGGTGACACGGCCCCTGCACTGCCAGGCCGCACTGTGTGCACTCGTCCCCCCAGATCCCCCAA 2507
Query 1942 -------------------------------------------------------------------------- 1941
Sbjct 2508 CGAGGTATCTCTGGAGCAGGAGTCAGAAGATGATGCTCGGGGTGTCCGCAGCTCCCTGGAGGGGCATGGCCAGC 2581
Query 1942 -------------------------------------------------------------------------- 1941
Sbjct 2582 ACCGGGCCAACACCACAATGCACGTGTGCTGGTACCGGAACACCAGCGTGTCCAGGGCAGACCACAGTGCAGCT 2655
Query 1942 -------------------------------------------------------------------------- 1941
Sbjct 2656 GTCGAGAACCAGCTTTCAGGATATCTGCTAAGAAAGTTCAAAAACAGTCATGGCTGGCAGAAGCTCTGGGTCGT 2729
Query 1942 -------------------------------------------------------------------------- 1941
Sbjct 2730 CTTTACCAACTTCTGTTTGTTCTTCTACAAAACTCATCAGGATGACTACCCACTGGCCAGCCTCCCGCTGCTGG 2803
Query 1942 -------------------------------------------------------------------------- 1941
Sbjct 2804 GCTACAGCGTGAGCATCCCCAGGGAGGCCGATGGCATACACAAAGACTATGTTTTCAAGCTCCAGTTCAAATCC 2877
Query 1942 -------------------------------------------------------------------------- 1941
Sbjct 2878 CACGTCTACTTCTTCCGGGCTGAGAGCAAGTACACATTTGAAAGGTGGATGGAGGTGATCCAGGGGGCCAGCAG 2951
Query 1942 -------------------------------------------------------------------------- 1941
Sbjct 2952 CTCAGCCGGGAGGGCCCCAAGCATCGTGCAGGATGGCCCCCAACCCTCCTCAGGGCTGGAGGGGATGGTCAGGG 3025
Query 1942 ----------- 1941
Sbjct 3026 GGAAGGAGGAA 3036