Nucleotide Global Alignment
Description
- Query:
- TRCN0000469151
- Subject:
- XR_002958717.1
- Aligned Length:
- 3638
- Identities:
- 816
- Gaps:
- 2819
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TAATTGTTTGGGTTCATCTTCTCTAACTACAAAATTAAGTTTACAGTTCTCTTTATCGTCCCAAGTTTCTTCCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTGTGAAAGGCCCACTATCATCTACTCTTACCACTTCCAGGTAAATCCATCTCCAAATATTTTGTTCACAGTCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCCTCCCGCCTGAAAGATAAGAAAAGTTGAGTGGGTTCCAAGGAGTCTGAGAAAGCTTTGTTTTCTATTTCCCG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TCTTCCAAAGCTCCTATACCCAGCAGGGTGGGGGGCCATGTTATCTAAACTGTGGCTTTACTTTTGGCTGGAAC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TAGGTCACCTCAAGGGCTGACCGACTTGAAGCCTTCACTGTGGGAAGTGCCTGCTCTCTTATTATGAACAATAG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTGGCATTCCCCCCCAGGCACGGTTTCCATAGTCCTCAGCAACCCTGGAGTGAGTTCGACGGGAATGCAGGCCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AGAGAGGAGAGGTCACAGTCAGGATGCAAACTCAGTTCTGCCTGACCTTCAGTCCGTTTGTGTGAGAACTGCAC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ACGTGGCTCCAGGCCTGCGGAGGAGCCAGAGGACGGGCCGGGGAAGCTTGGGGCAGAGCGGTGCCCTGGTGGCG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GCCCATGGGGGCAGAGCTGGGCTCCTCCCAGAAGCCCCTGCAGGTCCCAGCTCCAGGGACTTCCCGGGTTGCAG 666
Query 1 ----ATGACCCACCAGGATCTGAGCATCACAGCCAAACTCATCAATGGAGGTGTAGCAGGGCTCGTGGGGGTGA 70
|||.|.||||.| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CAAGATGCCTCACCCG-------GCATCACAGCCAAACTCATCAATGGAGGTGTAGCAGGGCTCGTGGGGGTGA 733
Query 71 CCTGCGTGTTCCCCATCGACTTGGCCAAGACTCGCCTGCAGAACCAGCATGGGAAAGCCATGTACAAAGGAATG 144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 734 CCTGCGTGTTCCCCATCGACTTGGCCAAGACTCGCCTGCAGAACCAGCATGGGAAAGCCATGTACAAAGGAATG 807
Query 145 ATCGACTGCCTGATGAAGACGGCTCGGGCGGAGGGCTTCTTCGGCATGTACCGAGGGGCTGCAGTGAACCTCAC 218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 808 ATCGACTGCCTGATGAAGACGGCTCGGGCGGAGGGCTTCTTCGGCATGTACCGAGGGGCTGCAGTGAACCTCAC 881
Query 219 TCTGGTCACTCCAGAGAAGGCCATCAAGCTGGCGGCCAACGACTTTTTCCGGCGGCTGCTCATGGAAGATGGGA 292
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 882 TCTGGTCACTCCAGAGAAGGCCATCAAGCTGGCGGCCAACGACTTTTTCCGGCGGCTGCTCATGGAAGA----- 950
Query 293 TGCAGCGGAACCTGAAGATGGAGATGCTTGCCGGGTGTGGGGCTGGGATGTGCCAGGTCGTGGTGACCTGTCCC 366
Sbjct 951 -------------------------------------------------------------------------- 950
Query 367 ATGGAAATGCTCAAGATTCAGCTGCAGGATGCTGGACGCCTGGCCGTCCATCATCAGGGCTCGGCCTCAGCACC 440
||||||||||||||||||||||||||||||||||
Sbjct 951 ----------------------------------------TGGCCGTCCATCATCAGGGCTCGGCCTCAGCACC 984
Query 441 CTCCACCTCCAGGTCCTACACAACTGGTTCGGCTTCCACCCACAGGCGCCCCTCTGCCACCCTCATTGCCTGGG 514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 985 CTCCACCTCCAGGTCCTACACAACTGGTTCGGCTTCCACCCACAGGCGCCCCTCTGCCACCCTCATTGCCTGGG 1058
Query 515 AGCTGCTCCGCACTCAGGGCCTGGCTGGGCTCTACAGGGGCCTGGGTGCCACTCTCCTCAGAGACATTCCTTTC 588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1059 AGCTGCTCCGCACTCAGGGCCTGGCTGGGCTCTACAGGGGCCTGGGTGCCACTCTCCTCAGAGACATTCCTTTC 1132
Query 589 TCCATCATCTACTTCCCACTGTTTGCCAACCTTAACAACCTGGGGTTCAACGAGCTCGCCGGTAAGGCGTCCTT 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1133 TCCATCATCTACTTCCCACTGTTTGCCAACCTTAACAACCTGGGGTTCAACGAGCTCGCCGGTAAGGCGTCCTT 1206
Query 663 TGCACATTCCTTCGTGTCAGGCTGTGTGGCAGGTTCCATAGCTGCGGTCGCAGTGACGCCTCTAGATGTTCTGA 736
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1207 TGCACATTCCTTCGTGTCAGGCTGTGTGGCAGGTTCCATAGCTGCGGTCGCAGTGACGCCTCTAGATGTTCTGA 1280
Query 737 AAACTCGAATCCAAACCCTCAAGAAAGGCCTGGGCGAGGACATGTACAGTGGGATCACCGACTGTGCCAGGAAA 810
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1281 AAACTCGAATCCAAACCCTCAAGAAAGGCCTGGGCGAGGACATGTACAGTGGGATCACCGACTGTGCCAGGAAA 1354
Query 811 CTCTGGATTCAGGAGGGACCATCTGCCTTCATGAAAGGCGCTGGCTGCCGGGCACTGGTCATAGCACCTCTCTT 884
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1355 CTCTGGATTCAGGAGGGACCATCTGCCTTCATGAAAGGCGCTGGCTGCCGGGCACTGGTCATAGCACCTCTCTT 1428
Query 885 TGGGATTGCTCAAGGGGTCTATTTTATTGGGATTGGAGAGCGCATCTTAAAGTGTTTTGAC------------- 945
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1429 TGGGATTGCTCAAGGGGTCTATTTTATTGGGATTGGAGAGCGCATCTTAAAGTGTTTTGACTAGACAGAGCTGG 1502
Query 946 -------------------------------------------------------------------------- 945
Sbjct 1503 AGGTCAAGTCCCTGCGCTTGCCGCCCTCTCTCTAGCTGTTTCACTTAGCCTAGAGGGGGCAAGGGCAGGTGGGG 1576
Query 946 -------------------------------------------------------------------------- 945
Sbjct 1577 CCACTCTGGCCTGCCTGGTCCTCTGCGTTGTAGTGCTACCTCAATCTCGGGAGAAACAGCCCTATATTCTAACA 1650
Query 946 -------------------------------------------------------------------------- 945
Sbjct 1651 AGTTGAGCACAGCCTTCTTCCCCTTCGTGTCTACACTCGTTTTCCTTTGTGGGCACAGCTACCAGGGGCTTTTG 1724
Query 946 -------------------------------------------------------------------------- 945
Sbjct 1725 GAAGCCCCTAACCACCTACTTTTCAACAAAAATGGTACTTTCGTTGTATTAATTGCAGGACCTTAACAGGTAGT 1798
Query 946 -------------------------------------------------------------------------- 945
Sbjct 1799 CACAATAGAAGGGTTGTTTCTGTATTTTAACATTTCTATTTCACAGTCAAACTCGGCATTCTTCAGTCAGCTTG 1872
Query 946 -------------------------------------------------------------------------- 945
Sbjct 1873 AGGATTTAGCATTGTTAATCTTGGACTCCATAACTTATGAGTCCTAGCACTGATTTTGAGGAAAAGGAGGATCA 1946
Query 946 -------------------------------------------------------------------------- 945
Sbjct 1947 GAAGTTCAAGGGACCGTGAAAGCCCTCAGAGTCAGCACCTAGTTTGAGACCAAGCACCCTTTCGAATCCCTGGA 2020
Query 946 -------------------------------------------------------------------------- 945
Sbjct 2021 TGGCTGAGGGGGCTGAGGCCGGCTCTGACTGGGCAGCTCAGCCCCTCCCCCAGAGCCCAGGGTCTTGCACACCC 2094
Query 946 -------------------------------------------------------------------------- 945
Sbjct 2095 CTCCCTGTAACCAAGGAACACTCTGAAATAAAGGTGAATGGCTAAAATCTCATCTGTTCATCAGTGGGTACAGC 2168
Query 946 -------------------------------------------------------------------------- 945
Sbjct 2169 AGATAGGCTGCAGTGAATGCTATCACCATCTACTTTTCTACGTCCATTTCAAAACCAAACATTAAAAAGGGCAT 2242
Query 946 -------------------------------------------------------------------------- 945
Sbjct 2243 AGAAGCAGACCCCCGTCACTCTTCAAACTGTTACTTGTGGGGGTGGAGGAACACAGCCATAGGGAAATATCTGC 2316
Query 946 -------------------------------------------------------------------------- 945
Sbjct 2317 TTGTTAGTGACACTGGGTTTTAAGCCTTGATTCTATCCCTTCATAAGTGAATCGTCTTGAGGAGCTGAGTTTGC 2390
Query 946 -------------------------------------------------------------------------- 945
Sbjct 2391 TGTGAGAGCCCTCCTCACGCACCTCGATTCCTCCCCCAAAGGCTGCTACAGGAGAGATAATGTCACAGCAGCAG 2464
Query 946 -------------------------------------------------------------------------- 945
Sbjct 2465 GGCCAAGTCCTAAGAAAATCAGCACCTGCTGCAGGAGCTGGTGTTTACAATAGTCCCATCTACTGTGAAACCTG 2538
Query 946 -------------------------------------------------------------------------- 945
Sbjct 2539 GGCTAACAAGGAAGAGGATGGTGCTAACATGGTCAGCCCTGGGGGCCTCACTCTCTGTTATGAGAACTGCATTT 2612
Query 946 -------------------------------------------------------------------------- 945
Sbjct 2613 GAGTATGGGCCCTGGAGACAGACCTCAGTTCAAGTCCCAGCTCCACCATGTACTAGCTGCAAGGCCCTGGGCAG 2686
Query 946 -------------------------------------------------------------------------- 945
Sbjct 2687 CTCTTAGTCGTCACCTACGGAAAAATAAAACATGGGACAGGGAAGGAAGAACAGGGCCTCTGTGAAAGGATCTG 2760
Query 946 -------------------------------------------------------------------------- 945
Sbjct 2761 GTTCCAGCACACAGTGACCTGCTCCAAAATAACTCGGTTTTTTGGGTCTGGCGCCGTGGCTTACGCCTGTAATC 2834
Query 946 -------------------------------------------------------------------------- 945
Sbjct 2835 CCAGCACTTTGGGAGGCCGAGGCAGGCGGATCCGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAA 2908
Query 946 -------------------------------------------------------------------------- 945
Sbjct 2909 CCCCGTCTCTACCAAAAAATACAAAAAATTAGCCAGGCGTGGTGGCGGGCGCCTGTAGTCCCGGCTACTCCGGA 2982
Query 946 -------------------------------------------------------------------------- 945
Sbjct 2983 AGCTGAGGCAGGAGAATGGCACGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATGGCACCACTGCACCCCA 3056
Query 946 -------------------------------------------------------------------------- 945
Sbjct 3057 GCCTGGGCAACAGAGCGAGACTCCGTCTCAAAAAAAAAAGAAAAAGAAAAAACAAACAACTTGGTTTTTCTCAT 3130
Query 946 -------------------------------------------------------------------------- 945
Sbjct 3131 TCGGGCAACACTAATAAAACTATTTCCTCAATAAAGTTGTGCACGTCACGCTGAAGAGCCATGTGGGGTGTGTG 3204
Query 946 -------------------------------------------------------------------------- 945
Sbjct 3205 GAAGATTGCAAGGGTGGAAAGAATGCTCCTGGTGATGGGCTGGGAACAACGGGCAACAGCCCAGGGGACCCCCA 3278
Query 946 -------------------------------------------------------------------------- 945
Sbjct 3279 GAGGGTTAACGGGTCCAGGTGCTGACAGCTGTCACCATCAAGTGCCACGGGGATTGGGAAAATACTTCTTTTCT 3352
Query 946 -------------------------------------------------------------------------- 945
Sbjct 3353 AGGTGCCTCAGTAAGAATTTGACTCTGTCAAAACCTAAATTTGTAGTGCCTTACACTAGAAATCACATTAAATC 3426
Query 946 -------------------------------------------------------------------------- 945
Sbjct 3427 CGCATAACTCTTTTAATAAATAAAGCATATTCATGGCTTAGATTTTAAATCACATTTACAGATGAGGGAAAACT 3500
Query 946 ------------ 945
Sbjct 3501 TCTAGGCCTAAA 3512
