Construct: ORF TRCN0000469151

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF011719.1_s317c1
Derived from:
ccsbBroadEn_04293
DNA Barcode:
TATCTCGATTCCAATCGGTCAGCC
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
SLC25A18 (83733)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000469151
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 83733 SLC25A18 solute carrier family 25 me... NM_001303484.1 100% 100%
2 human 83733 SLC25A18 solute carrier family 25 me... NM_031481.3 100% 100%
3 human 83733 SLC25A18 solute carrier family 25 me... XM_011546151.2 100% 100%
4 human 83733 SLC25A18 solute carrier family 25 me... XM_011546152.1 100% 100%
5 human 83733 SLC25A18 solute carrier family 25 me... XM_011546153.3 100% 100%
6 human 83733 SLC25A18 solute carrier family 25 me... XM_011546154.2 100% 100%
7 human 83733 SLC25A18 solute carrier family 25 me... XM_017028968.1 100% 100%
8 human 83733 SLC25A18 solute carrier family 25 me... XM_017028970.2 86.3% 86.3% 0_1ins129
9 human 83733 SLC25A18 solute carrier family 25 me... XM_017028971.2 86.3% 86.3% 0_1ins129
10 human 83733 SLC25A18 solute carrier family 25 me... XM_017028972.2 86.3% 86.3% 0_1ins129
11 human 83733 SLC25A18 solute carrier family 25 me... XM_017028973.2 86.3% 86.3% 0_1ins129
12 human 83733 SLC25A18 solute carrier family 25 me... XM_017028974.2 86.3% 86.3% 0_1ins129
13 human 83733 SLC25A18 solute carrier family 25 me... XM_017028975.2 86.3% 86.3% 0_1ins129
14 human 83733 SLC25A18 solute carrier family 25 me... XM_011546150.2 86% 86% 1_153del
15 human 83733 SLC25A18 solute carrier family 25 me... XM_011546149.2 76.8% 76.8% 1_285del
16 human 83733 SLC25A18 solute carrier family 25 me... XR_002958717.1 22.4% (many diffs)
17 human 83733 SLC25A18 solute carrier family 25 me... XR_951210.3 18.5% 1_1496del;1783_1784ins119;2323_4345del
18 mouse 71803 Slc25a18 solute carrier family 25 (m... NM_001081048.2 83.9% 86.5% (many diffs)
19 mouse 71803 Slc25a18 solute carrier family 25 (m... XM_006506649.3 83.9% 86.5% (many diffs)
20 mouse 71803 Slc25a18 solute carrier family 25 (m... XM_006506650.3 83.9% 86.5% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1011
ORF length:
945
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgac ccaccaggat ctgagcatca cagccaaact catcaatgga ggtgtagcag
121ggctcgtggg ggtgacctgc gtgttcccca tcgacttggc caagactcgc ctgcagaacc
181agcatgggaa agccatgtac aaaggaatga tcgactgcct gatgaagacg gctcgggcgg
241agggcttctt cggcatgtac cgaggggctg cagtgaacct cactctggtc actccagaga
301aggccatcaa gctggcggcc aacgactttt tccggcggct gctcatggaa gatgggatgc
361agcggaacct gaagatggag atgcttgccg ggtgtggggc tgggatgtgc caggtcgtgg
421tgacctgtcc catggaaatg ctcaagattc agctgcagga tgctggacgc ctggccgtcc
481atcatcaggg ctcggcctca gcaccctcca cctccaggtc ctacacaact ggttcggctt
541ccacccacag gcgcccctct gccaccctca ttgcctggga gctgctccgc actcagggcc
601tggctgggct ctacaggggc ctgggtgcca ctctcctcag agacattcct ttctccatca
661tctacttccc actgtttgcc aaCCTTAACA ACCTGGGGTT CAACGAGCTC GCCGGTAAGG
721CGTCCTTTGC ACATTCCTTC GTGTCAGGCT GTGTGGCAGG TTCCATAGCT GCGGTCGCAG
781TGACGCCTCT AGATGTTCTG AAAACTCGAA TCCAAACCCT CAAGAAAGGC CTGGGCGAGG
841ACATGTACAG TGGGATCACC GACTGTGCCA GGAAACTCTG GATTCAGGAG GGACCATCTG
901CCTTCATGAA AGGCGCTGGC TGCCGGGCAC TGGTCATAGC ACCTCTCTTT GGGATTGCTC
961AAGGGGTCTA TTTTATTGGG ATTGGAGAGC GCATCTTAAA GTGTTTTGAC TACCCAACTT
1021TCTTGTACAA AGTGGTTGAT ATCGGTAAGC CTATCCCTAA CCCTCTCCTC GGTCTCGATT
1081CTACGTAGTA ATGAACTAGT CCGTAACTTG AAAGTATTTC GATTTCTTGG CTTTATATAT
1141CTTGTGGAAA GGACGATATC TCGATTCCAA TCGGTCAGCC ACGCGTTAAG TCgacaatca
1201acctctggat tacaaaattt gtgaaagatt

Download FASTA (ORF) (Full)