Nucleotide Global Alignment
Description
- Query:
- TRCN0000469151
- Subject:
- XR_951210.3
- Aligned Length:
- 4464
- Identities:
- 826
- Gaps:
- 3638
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TAGAGTGCTTCCAGATTTATCTTCTTCGGGCCAAAACCAGCAACAAATATATGTACCAAAAGTTAGCATCTTCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ACTGGTTAACTGTTTCAAAACAGTGCAGTAGGCAGTGTAAATGTGGCTCTATTTTTGGAACTGTTACTGTTTAA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CGCTTGTTAAGCATCCTGGGTAAATATATCTTACACAGATAATCCTACACAGTGAGCTTCTTAAAATAAGAGCA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TAAAAGCTACTCGGGCAAGATTTAGGGAGACAGGAAGCTATACATTGTTACTGTAGATTAGTCTCAAAAGTTCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GATCAACTTTCTATTTTGACATTTGGAGACATCCATAGGTGCTTCTCTTGTTAAAGATTAATGTCTCTTGTCTC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TAAACCAATTCGTGTTACTGGAAGGAAAGGCAACGCAAGTTTTATAAATCAGCCCCTTTGTGGGCTCCATTTTG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CTATACTCTATGTTCTCTGAGAGTGCTACCAACGGAATTGAGAAAATAACCATCCAGACGGGCTATTTGGGGGC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGATCTTTACCCTGGAATCTTCCTGGAAGGTGAACGGCCTATGTCATGCAGTTGTTATGCAAGAGGTATCATGG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GACCTTTCCTTCTGGGCGCTCATGGAGCCGCGGCAGAGCCCTGGGTGACCCAGCAGCAGCTGCCTGCTGTGTGG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CTGCCTTCACTGTCCTCCCCCACAACTGCTGTTGATTTCTCTGCATTGACCCTGCAGATGTTTCCCTGGCCTCG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TGGTGTTCCTTTGGACTTTTAAGGGACCTCTGTGCATCTATTTTAGTCCCCTTTCTGCTAGCAATGCTCACTCC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CCTAGTTTCCTTAAGCAGTTTTATAAAAAACCTTCAGTGAAAAATACTAGCCAAGAAGGCGAAGGCATCTGGAA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AATCCCCAGATTTGGCTATTGTGTGCTGCAATGCCAGCCCCCTTCTACAGCCATGACATGCATATCAATGCAGG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TGCCCTTGAGACTCCTGCAGGTTCGAGAAAGCATGACATGCTCCCAGAATCCTGGATTTGGACTTCATTCTGGA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CAGCATATGACAAGGACGAGGACCCCTATTCTAGCCAGTTAAAGCTGGACAGAATTTTTAAAAGCAATGAAGCC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AGTTCCTTGGATATATCCACGGGCTTTGCTTTGAGAAGGAACTGAGTAGGCAGTGAGAAGAGTCGAGTGAAGCC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TGGCCCGTGAGTGCCTCAACAACTGAGATGAACGTCGACTCGCTTGCAGCTCAGCAGCGATCTGAACTATATCC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TGGGTTCCAGAAAAGGCAGAGGTTCTTACCGAAAGCAGGGGAGGAAGCCGCAGCCCAAGGAGGTCGTCACTTGC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CGGGAAGGTGGCTCGGGCCAGGCTGCACTCAAAACCCGTGCTCTGTCCACACTGCTACGGGGCCAGAGCCAAGG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AAGCTTCCACTTCTTCCCCCAGACAGCCCCAACAGCGGCTACCCCAAGGAGCCAGCAGCCTTGTGTCCTGGGAT 1480
Query 1 ----------------ATGACCCACCAGGATCTGAGCATCACAGCCAAACTCATCAATGGAGGTGTAGCAGGGC 58
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 CCCCAGCCCCTGCAGAATGACCCACCAGGATCTGAGCATCACAGCCAAACTCATCAATGGAGGTGTAGCAGGGC 1554
Query 59 TCGTGGGGGTGACCTGCGTGTTCCCCATCGACTTGGCCAAGACTCGCCTGCAGAACCAGCATGGGAAAGCCATG 132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 TCGTGGGGGTGACCTGCGTGTTCCCCATCGACTTGGCCAAGACTCGCCTGCAGAACCAGCATGGGAAAGCCATG 1628
Query 133 TACAAAGGAATGATCGACTGCCTGATGAAGACGGCTCGGGCGGAGGGCTTCTTCGGCATGTACCGAGGGGCTGC 206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 TACAAAGGAATGATCGACTGCCTGATGAAGACGGCTCGGGCGGAGGGCTTCTTCGGCATGTACCGAGGGGCTGC 1702
Query 207 AGTGAACCTCACTCTGGTCACTCCAGAGAAGGCCATCAAGCTGGCGGCCAACGACTTTTTCCGGCGGCTGCTCA 280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 AGTGAACCTCACTCTGGTCACTCCAGAGAAGGCCATCAAGCTGGCGGCCAACGACTTTTTCCGGCGGCTGCTCA 1776
Query 281 TGGAAGATGGGATGCAGCGGAACCTGAAGATGGAGATGCTTGCCGGGTGTGGGGCTGGGATGTGCCAGGTCGTG 354
|||||||
Sbjct 1777 TGGAAGA------------------------------------------------------------------- 1783
Query 355 GTGACCTGTCCCATGGAAATGCTCAAGATTCAGCTGCAGGATGCTGGACGCCTGGCCGTCCATCATCAGGGCTC 428
||||||||||||||||||||||
Sbjct 1784 ----------------------------------------------------TGGCCGTCCATCATCAGGGCTC 1805
Query 429 GGCCTCAGCACCCTCCACCTCCAGGTCCTACACAACTGGTTCGGCTTCCACCCACAGGCGCCCCTCTGCCACCC 502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1806 GGCCTCAGCACCCTCCACCTCCAGGTCCTACACAACTGGTTCGGCTTCCACCCACAGGCGCCCCTCTGCCACCC 1879
Query 503 TCATTGCCTGGGAGCTGCTCCGCACTCAGGGCCTGGCTGGGCTCTACAGGGGCCTGGGTGCCACTCTCCTCAGA 576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1880 TCATTGCCTGGGAGCTGCTCCGCACTCAGGGCCTGGCTGGGCTCTACAGGGGCCTGGGTGCCACTCTCCTCAGA 1953
Query 577 GACATTCCTTTCTCCATCATCTACTTCCCACTGTTTGCCAACCTTAACAACCTGGGGTTCAACGAGCTCGCCGG 650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1954 GACATTCCTTTCTCCATCATCTACTTCCCACTGTTTGCCAACCTTAACAACCTGGGGTTCAACGAGCTCGCCGG 2027
Query 651 TAAGGCGTCCTTTGCACATTCCTTCGTGTCAGGCTGTGTGGCAGGTTCCATAGCTGCGGTCGCAGTGACGCCTC 724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2028 TAAGGCGTCCTTTGCACATTCCTTCGTGTCAGGCTGTGTGGCAGGTTCCATAGCTGCGGTCGCAGTGACGCCTC 2101
Query 725 TAGATGTTCTGAAAACTCGAATCCAAACCCTCAAGAAAGGCCTGGGCGAGGACATGTACAGTGGGATCACCGAC 798
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2102 TAGATGTTCTGAAAACTCGAATCCAAACCCTCAAGAAAGGCCTGGGCGAGGACATGTACAGTGGGATCACCGAC 2175
Query 799 TGTGCCAGGAAACTCTGGATTCAGGAGGGACCATCTGCCTTCATGAAAGGCGCTGGCTGCCGGGCACTGGTCAT 872
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2176 TGTGCCAGGAAACTCTGGATTCAGGAGGGACCATCTGCCTTCATGAAAGGCGCTGGCTGCCGGGCACTGGTCAT 2249
Query 873 AGCACCTCTCTTTGGGATTGCTCAAGGGGTCTATTTTATTGGGATTGGAGAGCGCATCTTAAAGTGTTTTGAC- 945
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2250 AGCACCTCTCTTTGGGATTGCTCAAGGGGTCTATTTTATTGGGATTGGAGAGCGCATCTTAAAGTGTTTTGACT 2323
Query 946 -------------------------------------------------------------------------- 945
Sbjct 2324 AGACAGAGCTGGAGGTCAAGTCCCTGCGCTTGCCGCCCTCTCTCTAGCTGTTTCACTTAGCCTAGAGGGGGCAA 2397
Query 946 -------------------------------------------------------------------------- 945
Sbjct 2398 GGGCAGGTGGGGCCACTCTGGCCTGCCTGGTCCTCTGCGTTGTAGTGCTACCTCAATCTCGGGAGAAACAGCCC 2471
Query 946 -------------------------------------------------------------------------- 945
Sbjct 2472 TATATTCTAACAAGTTGAGCACAGCCTTCTTCCCCTTCGTGTCTACACTCGTTTTCCTTTGTGGGCACAGCTAC 2545
Query 946 -------------------------------------------------------------------------- 945
Sbjct 2546 CAGGGGCTTTTGGAAGCCCCTAACCACCTACTTTTCAACAAAAATGGTACTTTCGTTGTATTAATTGCAGGACC 2619
Query 946 -------------------------------------------------------------------------- 945
Sbjct 2620 TTAACAGGTAGTCACAATAGAAGGGTTGTTTCTGTATTTTAACATTTCTATTTCACAGTCAAACTCGGCATTCT 2693
Query 946 -------------------------------------------------------------------------- 945
Sbjct 2694 TCAGTCAGCTTGAGGATTTAGCATTGTTAATCTTGGACTCCATAACTTATGAGTCCTAGCACTGATTTTGAGGA 2767
Query 946 -------------------------------------------------------------------------- 945
Sbjct 2768 AAAGGAGGATCAGAAGTTCAAGGGACCGTGAAAGCCCTCAGAGTCAGCACCTAGTTTGAGACCAAGCACCCTTT 2841
Query 946 -------------------------------------------------------------------------- 945
Sbjct 2842 CGAATCCCTGGATGGCTGAGGGGGCTGAGGCCGGCTCTGACTGGGCAGCTCAGCCCCTCCCCCAGAGCCCAGGG 2915
Query 946 -------------------------------------------------------------------------- 945
Sbjct 2916 TCTTGCACACCCCTCCCTGTAACCAAGGAACACTCTGAAATAAAGGTGAATGGCTAAAATCTCATCTGTTCATC 2989
Query 946 -------------------------------------------------------------------------- 945
Sbjct 2990 AGTGGGTACAGCAGATAGGCTGCAGTGAATGCTATCACCATCTACTTTTCTACGTCCATTTCAAAACCAAACAT 3063
Query 946 -------------------------------------------------------------------------- 945
Sbjct 3064 TAAAAAGGGCATAGAAGCAGACCCCCGTCACTCTTCAAACTGTTACTTGTGGGGGTGGAGGAACACAGCCATAG 3137
Query 946 -------------------------------------------------------------------------- 945
Sbjct 3138 GGAAATATCTGCTTGTTAGTGACACTGGGTTTTAAGCCTTGATTCTATCCCTTCATAAGTGAATCGTCTTGAGG 3211
Query 946 -------------------------------------------------------------------------- 945
Sbjct 3212 AGCTGAGTTTGCTGTGAGAGCCCTCCTCACGCACCTCGATTCCTCCCCCAAAGGCTGCTACAGGAGAGATAATG 3285
Query 946 -------------------------------------------------------------------------- 945
Sbjct 3286 TCACAGCAGCAGGGCCAAGTCCTAAGAAAATCAGCACCTGCTGCAGGAGCTGGTGTTTACAATAGTCCCATCTA 3359
Query 946 -------------------------------------------------------------------------- 945
Sbjct 3360 CTGTGAAACCTGGGCTAACAAGGAAGAGGATGGTGCTAACATGGTCAGCCCTGGGGGCCTCACTCTCTGTTATG 3433
Query 946 -------------------------------------------------------------------------- 945
Sbjct 3434 AGAACTGCATTTGAGTATGGGCCCTGGAGACAGACCTCAGTTCAAGTCCCAGCTCCACCATGTACTAGCTGCAA 3507
Query 946 -------------------------------------------------------------------------- 945
Sbjct 3508 GGCCCTGGGCAGCTCTTAGTCGTCACCTACGGAAAAATAAAACATGGGACAGGGAAGGAAGAACAGGGCCTCTG 3581
Query 946 -------------------------------------------------------------------------- 945
Sbjct 3582 TGAAAGGATCTGGTTCCAGCACACAGTGACCTGCTCCAAAATAACTCGGTTTTTTGGGTCTGGCGCCGTGGCTT 3655
Query 946 -------------------------------------------------------------------------- 945
Sbjct 3656 ACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCAGGCGGATCCGAGGTCAGGAGATCGAGACCATCCTGGCT 3729
Query 946 -------------------------------------------------------------------------- 945
Sbjct 3730 AACACGGTGAAACCCCGTCTCTACCAAAAAATACAAAAAATTAGCCAGGCGTGGTGGCGGGCGCCTGTAGTCCC 3803
Query 946 -------------------------------------------------------------------------- 945
Sbjct 3804 GGCTACTCCGGAAGCTGAGGCAGGAGAATGGCACGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATGGCAC 3877
Query 946 -------------------------------------------------------------------------- 945
Sbjct 3878 CACTGCACCCCAGCCTGGGCAACAGAGCGAGACTCCGTCTCAAAAAAAAAAGAAAAAGAAAAAACAAACAACTT 3951
Query 946 -------------------------------------------------------------------------- 945
Sbjct 3952 GGTTTTTCTCATTCGGGCAACACTAATAAAACTATTTCCTCAATAAAGTTGTGCACGTCACGCTGAAGAGCCAT 4025
Query 946 -------------------------------------------------------------------------- 945
Sbjct 4026 GTGGGGTGTGTGGAAGATTGCAAGGGTGGAAAGAATGCTCCTGGTGATGGGCTGGGAACAACGGGCAACAGCCC 4099
Query 946 -------------------------------------------------------------------------- 945
Sbjct 4100 AGGGGACCCCCAGAGGGTTAACGGGTCCAGGTGCTGACAGCTGTCACCATCAAGTGCCACGGGGATTGGGAAAA 4173
Query 946 -------------------------------------------------------------------------- 945
Sbjct 4174 TACTTCTTTTCTAGGTGCCTCAGTAAGAATTTGACTCTGTCAAAACCTAAATTTGTAGTGCCTTACACTAGAAA 4247
Query 946 -------------------------------------------------------------------------- 945
Sbjct 4248 TCACATTAAATCCGCATAACTCTTTTAATAAATAAAGCATATTCATGGCTTAGATTTTAAATCACATTTACAGA 4321
Query 946 ------------------------ 945
Sbjct 4322 TGAGGGAAAACTTCTAGGCCTAAA 4345
