Nucleotide Global Alignment
Description
- Query:
- TRCN0000469162
- Subject:
- XM_006538590.3
- Aligned Length:
- 5430
- Identities:
- 1546
- Gaps:
- 3693
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGTCGGGAGCCTCTGTGAAGGTCGCTGTTCGAGTGAGGCCCTTCAATTCTCGAGAGACCAGCAAGGAGTCCAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTGCATCATTCAGATGCAAGGCAACTCGACCAGTATTATTAACCCAAAGAACCCAAAGGAAGCACCAAAGTCCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCAGCTTTGACTACTCCTACTGGTCCCACACCTCGCCTGAAGATCCCTGTTTTGCATCGCAGAATCGTGTGTAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AATGACATTGGAAAGGAAATGCTCTTACATGCCTTTGAAGGTTATAATGTCTGTATCTTTGCCTATGGGCAGAC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGGTGCTGGGAAATCCTACACGATGATGGGGAAACAAGAAGAGAGCCAAGCTGGAATCATCCCACAGTTGTGTG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AAGAACTCTTTGAGAAGATCAATGACAATTGTAATGAAGAAATGTCTTACTCTGTAGAGGTGAGCTACATGGAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ATTTACTGTGAGAGAGTACGAGATTTACTGAATCCCAAAAACAAGGGTAACTTGCGTGTGCGTGAACACCCGCT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TCTTGGACCCTATGTGGAGGATCTGTCCAAGCTGGCGGTCACCTCCTACACTGACATCGCTGACCTGATGGATG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CTGGGAACAAAGCCAGGACTGTGGCAGCTACCAACATGAATGAGACAAGCAGCCGTTCTCACGCTGTGTTCACC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ATTGTCTTTACCCAGAAGAAACAGGATCCTGAGACGAACCTTTCTACTGAGAAGGTCAGTAAAATCAGCTTGGT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GGATCTAGCAGGAAGTGAACGGGCTGATTCAACTGGTGCCAAAGGAACTCGATTAAAGGAAGGTGCAAATATCA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ATAAGTCCCTTACAACTTTGGGCAAAGTCATTTCGGCCTTGGCAGAGGTGAGTAAAAAGAAGAAGAAAACTGAT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TTTATTCCTTATAGGGATTCTGTACTTACTTGGCTCCTTCGAGAAAATCTCGGTGGCAACTCCCGAACTGCAAT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GGTTGCTGCTCTGAGCCCAGCCGACATCAACTACGATGAAACTTTGAGCACACTGAGATACGCAGATCGTGCAA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AACAAATTAAATGCAATGCTGTTATCAATGAGGACCCGAATGCCAAGCTGGTTCGGGAGTTGAAGGAGGAAGTG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ACCCGACTGAAGGACCTTCTTCGTGCTCAGGGACTGGGAGATATTATTGATATTGACCCATTGATCGATGATTA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CTCTGGAAGTGGAGGCAAATATCTGAAAGATTTTCAGAACAATAAGCATAGGTACTTGCTAGCCTCTGAGAATC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AACGCCCTGGCAATTTTTCCACAGCATCCATGGGGTCCCTCACTTCATCTCCATCTTCATGCTCACTTAATAGT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CAGGTGGGCTTAACATCTGTGACCAGTATTCAGGAGAGGATCATGTCTACACCTGGAGGGGAGGAAGCCATTGA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 ACGTCTGAAGGAGTCAGAGAAGATCATTGCTGAGTTGAATGAAACCTGGGAAGAGAAACTTCGTAAAACAGAGG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CCATCAGAATGGAGAGAGAAGCCTTGTTGGCTGAGATGGGAGTTGCCATACGGGAAGATGGGGGGACACTTGGA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GTTTTCTCTCCTAAAAAGACCCCACATCTTGTTAACCTCAATGAAGACCCATTAATGTCGGAGTGTTTGCTCTA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TTACATCAAGGATGGAATTACAAGGGTTGGCCAGGCAGATGCTGAGCGGCGCCAGGACATAGTGCTGAGTGGGG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CCCACATTAAAGAGGAGCATTGTCTCTTTCGGAGTGAGAGGAGCAACACTGGTGAAGTTATTGTGACCTTGGAG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CCCTGTGAGCGCTCAGAAACATACGTGAATGGCAAGAGGGTGGCTCATCCTGTTCAGCTGCGCTCAGGGAACCG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TATCATCATGGGTAAAAACCATGTTTTTCGTTTTAACCACCCTGAACAAGCGCGAGCAGAAAGGGAAAAGACTC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CCTCAGCTGAGACCCCCTCTGAGCCTGTGGACTGGACCTTTGCTCAGAGAGAGCTTCTCGAAAAACAAGGAATT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GATATGAAACAGGAGATGGAAAAGAGGCTTCAGGAAATGGAGATCCTTTACAAAAAGGAGAAGGAGGAAGCCGA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TCTTCTCCTGGAGCAGCAGAGACTGGACTACGAGAGTAAATTGCAGGCCTTGCAGAGGCAGGTTGAGACTCGAT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CTCTGGCTGCAGAGACAACGGAAGAGGAGGAAGAGGAGGAGGAAGTTCCTTGGACACAGCATGAATTTGAGTTG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GCCCAGTGGGCGTTCCGGAAATGGAAGTCTCACCAGTTTACTTCATTAAGGGACTTACTCTGGGGCAATGCGGT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GTACCTGAAGGAAGCCAATGCCATCAGTGTGGAACTAAAGAAAAAGGTGCAGTTCCAGTTTGTTCTGCTGACTG 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 ACACGCTGTACTCCCCTGTGCCTCCTGAACTGCTTCCCTCGGAGATGGAGAAGACGCACGAGGACAGACCTTTC 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 CCTCGGACTGTGGTGGCGGTGGAGGTCCAGGATCTGAAGAATGGAGCAACACATTATTGGTCTTTGGATAAACT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 CAAGCAGAGACTGGATCTGATGCGAGAGATGTATGACAGGGCAGGGGAGGTGGCCTCCAGTGCCCAAGATGACA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 GCGAGACGACCATGACCGGCAGCGACCCATTCTACGATCGGTTCCACTGGTTCAAACTTGTGGGAAGCTCCCCT 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 ATTTTCCACGGCTGTGTGAATGAGCGCCTTGCCGACCGCACACCCTCCCCCACTTTTTCCACGGCCGATTCCGA 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 CATCACTGAACTGGCTGACGAGCAGCAGGATGCCATGGAGGACTTTGATGATGAGGCATTCGTGGATGACACCG 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 GCTCTGACGCAGGGACGGAAGAGGGATCAGAGCTCTTCAGTGATGGGCATGACCCATTTTACGACCGATCCCCT 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 TGGTTCATTTTAGTAGGAAGGGCATTTGTGTACTTGAGCAACCTGCTGTATCCGGTGCCCCTGATTCACAGGGT 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 GGCCATTGTCAGTGAGAAGGGGGAAGTCCGGGGATTTCTTCGTGTGGCTGTGCAGGCCATTGCAGCGGATGAAG 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 AAGCCCCTGATTATGGCTCTGGAATCCGGCAGTCGGGAACAGCTAAAATATCTTTTGATAATGAATACTTTAAT 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 CAGAGTGACTTCTCGTCAGCTGCAATGACTCGTTCTGGTCTGTCCTTGGAGGAGCTGAGGATTGTGGAAGGTCA 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 GGGCCAGAGTTCTGAAGTCATCAGTCCTCCAGAAGAAGTCAATCGAATGAACGACCTGGATTTGAAGTCAGGCA 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 CTTTGCTGGATGGGAAGATGGTGATGGAAGGGTTTTCTGAAGAGATTGGTAACCACCTGAAGCTGGGCAGTGCC 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 TTCACTTTCCGAGTCACTGTGCTCCAAGCCAGCGGGATCCTTCCAGAGTATGCAGACATCTTCTGTCAGTTCAA 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 CTTTTTGCATCGGCATGATGAAGCGTTCTCCACTGAACCCCTCAAGAACAATGGAAGAGGAAGTCCCCTGGGCT 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 TCTACCATGTACAGAACATTGCGGTGGAGGTCACAGAGTCGTTTGTGGACTACATCAAAACCAAGCCCATTGTA 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 TTCGAGGTCTTTGGGCACTACCAGCAGCACCCACTCCATCTGCAAGGACAAGATCTTAACAGTCCACCTCAGCC 3626
Query 1 -------------------------------------------------------------------ATGAGCA 7
||||.||
Sbjct 3627 ATCTCGGAGATTCTTCCCCCCACCCATGCCACTCTCCAAGCCAGTTCCAGCTACTAAGTTAAACACCATGAACA 3700
Query 8 AAACCAGCCTTGGCCAGAGCATGAGCAAGTATGACCTCCTGGTTTGGTTTGAGATCAGTGAACTGGAGCCTACA 81
||||||.||||||.||.||||||||||||||.|||||.|||||||||||||||||||||||||||||||||||.
Sbjct 3701 AAACCACCCTTGGGCAAAGCATGAGCAAGTACGACCTTCTGGTTTGGTTTGAGATCAGTGAACTGGAGCCTACT 3774
Query 82 GGAGAGTATATCCCAGCTGTGGTTGACCACACAGCAGGCTTGCCTTGCCAGGGGACATTTTTGCTTCATCAGGG 155
|||||||||||.|||||||||||||||||.||.||||||.||||.||||||||||||||||||||.||.|||||
Sbjct 3775 GGAGAGTATATTCCAGCTGTGGTTGACCATACTGCAGGCCTGCCCTGCCAGGGGACATTTTTGCTGCACCAGGG 3848
Query 156 CATCCAGCGAAGGATCACAGTGACCATTATCCATGAGAAGGGGAGCGAGCTCCATTGGAAAGATGTTCGTGAAC 229
||||||||||.|||||||||||||.||.|||||.||||||||.||.||||||||.|||||||||||.|||||.|
Sbjct 3849 CATCCAGCGACGGATCACAGTGACTATCATCCACGAGAAGGGCAGTGAGCTCCACTGGAAAGATGTCCGTGAGC 3922
Query 230 TGGTGGTAGGTCGTATTCGGAATAAGCCTGAGGTGGATGAAGCTGCAGTTGATGCCATCCTCTCCCTAAATATT 303
|||||||||||||.|||.|||||||.||.|||||.||||||||||||||||||||..|.||.|||||.||.||.
Sbjct 3923 TGGTGGTAGGTCGGATTAGGAATAAACCGGAGGTAGATGAAGCTGCAGTTGATGCTGTTCTTTCCCTGAACATC 3996
Query 304 ATTTCTGCCAAGTACCTGAAGTCTTCCCACAACTCTAGCAGGACCTTCTACCGCTTTGAGGCTGTGTGGGATAG 377
||.|||||.||||.|||||||.||.||||||.|||.|||||||||||||||||.||.|||||.||.|||||.||
Sbjct 3997 ATCTCTGCTAAGTCCCTGAAGGCTGCCCACAGCTCCAGCAGGACCTTCTACCGTTTCGAGGCAGTATGGGACAG 4070
Query 378 CTCTCTGCATAACTCCCTTCTTCTGAACCGAGTGACACCCTATGGAGAAAAGATCTACATGACCTTGTCGGCCT 451
|||.||.|||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||.||.||.|
Sbjct 4071 CTCCCTACATAACTCCCTCCTTCTGAACCGAGTGACACCCTATGGAGAAAAGATCTACATGACCTTATCTGCTT 4144
Query 452 ACCTAGAGCTGGATCATTGCATCCAGCCGGCTGTCATCACCAAGGATGTGTGCATGGTCTTCTACTCCCGAGAT 525
|.||.|||.||||||||||||||||||||||.||||||||.|||||||||||||||||||||||.|||||||||
Sbjct 4145 ATCTGGAGTTGGATCATTGCATCCAGCCGGCCGTCATCACTAAGGATGTGTGCATGGTCTTCTATTCCCGAGAT 4218
Query 526 GCCAAGATCTCACCACCACGCTCTCTGCGTAGCCTCTTTGGCAGCGGCTACTCAAAGTCACCAGATTCGAATCG 599
|||||||||||||||||.||.||||||||.|.|||||||||.||.||||||||||||||||||||.||.||.||
Sbjct 4219 GCCAAGATCTCACCACCGCGTTCTCTGCGAAACCTCTTTGGTAGTGGCTACTCAAAGTCACCAGACTCCAACCG 4292
Query 600 AGTCACTGGCATTTACGAACTCAGCTTATGCAAAATGTCAGACACAGGTAGTCCAGGTATGCAGAGAAGGAGAA 673
|||.|||||.||.||.||.||.|||||||||||||||.||||.||.||.||.|||||.||||||||..||||.|
Sbjct 4293 AGTGACTGGGATCTATGAGCTGAGCTTATGCAAAATGGCAGATACTGGAAGCCCAGGCATGCAGAGGCGGAGGA 4366
Query 674 GAAAAATCTTAGATACGTCAGTGGCATATGTGCGGGGAGAAGAGAACTTAGCAGGCTGGCGGCCCCGTGGAGAC 747
|||||.||||.|||||.|||||||||||||||||||||||.||||||.||||.||||||||.||.|||||||||
Sbjct 4367 GAAAAGTCTTGGATACCTCAGTGGCATATGTGCGGGGAGAGGAGAACCTAGCGGGCTGGCGACCTCGTGGAGAC 4440
Query 748 AGCCTCATCCTTGAGCACCAGTGGGAGCTGGAGAAGCTGGAGCTCCTACATGAGGTGGAAAAAACCCGCCACTT 821
||||||||.||.||.|||||||||||||||||||||||||||||.||.|||||||||||||||||.||||||||
Sbjct 4441 AGCCTCATTCTGGAACACCAGTGGGAGCTGGAGAAGCTGGAGCTGCTGCATGAGGTGGAAAAAACTCGCCACTT 4514
Query 822 TTTGCTGCTGCGTGAGAGACTTGGTGACAGCATCCCCAAATCCCTGAGCGACTCGTTATCCCCCAGCCTCAGCA 895
.||||||||.||.||||||||||||||||||.||||.||.||.|||||.|||||..|.|||||||||||.||||
Sbjct 4515 CTTGCTGCTTCGGGAGAGACTTGGTGACAGCGTCCCTAAGTCTCTGAGTGACTCACTGTCCCCCAGCCTGAGCA 4588
Query 896 GTGGGACCCTCAGCACCTCCACCAGTATCTCCTCTCAGATCTCAACCACTACCTTTGAAAGCGCCATCACACCT 969
||||.|||||.||||||||||||||.|||||||||||||||||||||||.|||||||||||||||||||||||.
Sbjct 4589 GTGGAACCCTTAGCACCTCCACCAGCATCTCCTCTCAGATCTCAACCACCACCTTTGAAAGCGCCATCACACCG 4662
Query 970 AGCGAGAGCAGTGGCTATGATTCAGGAGACATCGAAAGCCTGGTGGACCGAGAGAAAGAGCTGGCTACCAAGTG 1043
|||||||||||||||||.||.||.|.||||.|.|||||||||||.|||||.|||||||||||||||||.|||||
Sbjct 4663 AGCGAGAGCAGTGGCTACGACTCGGCAGACGTTGAAAGCCTGGTCGACCGGGAGAAAGAGCTGGCTACAAAGTG 4736
Query 1044 CCTGCAACTTCTCACCCACACTTTCAACAGAGAATTCAGCCAGGTGCACGGCAGCGTCAGTGACTGTAAGTTGT 1117
||||||.|||||||||||||||||||||.||||||||||||||||||||||||||.||||||||||||||||||
Sbjct 4737 CCTGCAGCTTCTCACCCACACTTTCAACCGAGAATTCAGCCAGGTGCACGGCAGCATCAGTGACTGTAAGTTGT 4810
Query 1118 CTGATATCTCTCCAATTGGACGGGATCCCTCTGAGTCCAGTTTCAGCAGTGCCACCCTCACTCCCTCCTCCACC 1191
||||.||||||||||||||||||||.|||||||.||||||||||||||||.||||||||||.|||||||||||.
Sbjct 4811 CTGACATCTCTCCAATTGGACGGGACCCCTCTGTGTCCAGTTTCAGCAGTTCCACCCTCACGCCCTCCTCCACT 4884
Query 1192 TGTCCCTCTCTGGTAGACTCTAGGAGCAACTCTCTGGATCAGAAGACCCCAGAAGCCAATTCCCGGGCCTCTAG 1265
||.|||||..||||.|||||.|||||||.||||.|||||||||||||||||||||||||.||.||.|||||.||
Sbjct 4885 TGCCCCTCCTTGGTGGACTCCAGGAGCAGCTCTATGGATCAGAAGACCCCAGAAGCCAACTCTCGTGCCTCCAG 4958
Query 1266 TCCCTGCCCAGAATTTGAACAGTTTCAGATTGTCCCAGCTGTGGAAACACCATATTTGGCCCGAGCAGGAAAAA 1339
||||||||.|||||||||||||||||||||.||||||.|||||||.|||||.|||||||||||||||||.||.|
Sbjct 4959 TCCCTGCCAAGAATTTGAACAGTTTCAGATCGTCCCAACTGTGGAGACACCCTATTTGGCCCGAGCAGGGAAGA 5032
Query 1340 ACGAATTTCTCAATCTTGTTCCAGATATTGAAGAAATTAGACCAAGCTCAGTGGTCTCTAAGAAAGGATACCTT 1413
|.|||||||||||||||||||||||.|||||||||.|.|||.|..|.||||||||.|||||||||||||||||.
Sbjct 5033 ATGAATTTCTCAATCTTGTTCCAGACATTGAAGAAGTCAGAGCGGGATCAGTGGTATCTAAGAAAGGATACCTG 5106
Query 1414 CATTTCAAGGAGCCTCTTTACAGTAACTGGGCTAAACATTTTGTTGTCGTCCGTCGGCCTTATGTCTTCATCTA 1487
||||||||.|||||.||||.|||||||||||||||||||||.|||||.||.|||||.|||||.|||||||||||
Sbjct 5107 CATTTCAAAGAGCCACTTTCCAGTAACTGGGCTAAACATTTCGTTGTGGTTCGTCGCCCTTACGTCTTCATCTA 5180
Query 1488 TAACAGTGACAAAGACCCTGTGGAGCGTGGAATCATTAACCTGTCCACAGCACAGGTGGAGTACAGTGAGGACC 1561
||||||||||||||||||.||.||||||||.||||||||||||||.||||||||||||||||||||.|||||||
Sbjct 5181 TAACAGTGACAAAGACCCAGTAGAGCGTGGCATCATTAACCTGTCTACAGCACAGGTGGAGTACAGCGAGGACC 5254
Query 1562 AGCAGGCCATGGTGAAGACACCAAACACATTTGCTGTCTGCACAAAGCACCGTGGGGTCCTTTTGCAGGCCCTC 1635
||||||||||||||||||||||.||.||.||||||||.||||||||||||||||||||||||.||||.||.|||
Sbjct 5255 AGCAGGCCATGGTGAAGACACCTAATACTTTTGCTGTATGCACAAAGCACCGTGGGGTCCTTCTGCAAGCTCTC 5328
Query 1636 AATGACAAAGACATGAACGACTGGTTGTATGCCTTCAACCCACTTCTAGCTGGCACAATACGGTCAAAGCTTTC 1709
|||||||||||||||||.||||||||.||||||||.|||||||||||.||||||||||||.|||||||.||.||
Sbjct 5329 AATGACAAAGACATGAATGACTGGTTATATGCCTTTAACCCACTTCTGGCTGGCACAATAAGGTCAAAACTCTC 5402
Query 1710 CCGCAGATGCCCGAGCCAGTCGAAATAC 1737
.||||||||||||||||||.|.||.|||
Sbjct 5403 TCGCAGATGCCCGAGCCAGCCAAAGTAC 5430
