Nucleotide Global Alignment
Description
- Query:
- TRCN0000469162
- Subject:
- XM_006538591.3
- Aligned Length:
- 5406
- Identities:
- 1546
- Gaps:
- 3669
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGTCGGGAGCCTCTGTGAAGGTCGCTGTTCGAGTGAGGCCCTTCAATTCTCGAGAGACCAGCAAGGAGTCCAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTGCATCATTCAGATGCAAGGCAACTCGACCAGTATTATTAACCCAAAGAACCCAAAGGAAGCACCAAAGTCCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCAGCTTTGACTACTCCTACTGGTCCCACACCTCGCCTGAAGATCCCTGTTTTGCATCGCAGAATCGTGTGTAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AATGACATTGGAAAGGAAATGCTCTTACATGCCTTTGAAGGTTATAATGTCTGTATCTTTGCCTATGGGCAGAC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGGTGCTGGGAAATCCTACACGATGATGGGGAAACAAGAAGAGAGCCAAGCTGGAATCATCCCACAGTTGTGTG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AAGAACTCTTTGAGAAGATCAATGACAATTGTAATGAAGAAATGTCTTACTCTGTAGAGGTGAGCTACATGGAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ATTTACTGTGAGAGAGTACGAGATTTACTGAATCCCAAAAACAAGGGTAACTTGCGTGTGCGTGAACACCCGCT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TCTTGGACCCTATGTGGAGGATCTGTCCAAGCTGGCGGTCACCTCCTACACTGACATCGCTGACCTGATGGATG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CTGGGAACAAAGCCAGGACTGTGGCAGCTACCAACATGAATGAGACAAGCAGCCGTTCTCACGCTGTGTTCACC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ATTGTCTTTACCCAGAAGAAACAGGATCCTGAGACGAACCTTTCTACTGAGAAGGTCAGTAAAATCAGCTTGGT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GGATCTAGCAGGAAGTGAACGGGCTGATTCAACTGGTGCCAAAGGAACTCGATTAAAGGAAGGTGCAAATATCA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ATAAGTCCCTTACAACTTTGGGCAAAGTCATTTCGGCCTTGGCAGAGGTGGATAACTGCACAAGCAAGAGTAAA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AAGAAGAAGAAAACTGATTTTATTCCTTATAGGGATTCTGTACTTACTTGGCTCCTTCGAGAAAATCTCGGTGG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CAACTCCCGAACTGCAATGGTTGCTGCTCTGAGCCCAGCCGACATCAACTACGATGAAACTTTGAGCACACTGA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GATACGCAGATCGTGCAAAACAAATTAAATGCAATGCTGTTATCAATGAGGACCCGAATGCCAAGCTGGTTCGG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GAGTTGAAGGAGGAAGTGACCCGACTGAAGGACCTTCTTCGTGCTCAGGGACTGGGAGATATTATTGATAATCT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GAAAGATTTTCAGAACAATAAGCATAGGTACTTGCTAGCCTCTGAGAATCAACGCCCTGGCAATTTTTCCACAG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CATCCATGGGGTCCCTCACTTCATCTCCATCTTCATGCTCACTTAATAGTCAGGTGGGCTTAACATCTGTGACC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AGTATTCAGGAGAGGATCATGTCTACACCTGGAGGGGAGGAAGCCATTGAACGTCTGAAGGAGTCAGAGAAGAT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CATTGCTGAGTTGAATGAAACCTGGGAAGAGAAACTTCGTAAAACAGAGGCCATCAGAATGGAGAGAGAAGCCT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TGTTGGCTGAGATGGGAGTTGCCATACGGGAAGATGGGGGGACACTTGGAGTTTTCTCTCCTAAAAAGACCCCA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CATCTTGTTAACCTCAATGAAGACCCATTAATGTCGGAGTGTTTGCTCTATTACATCAAGGATGGAATTACAAG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GGTTGGCCAGGCAGATGCTGAGCGGCGCCAGGACATAGTGCTGAGTGGGGCCCACATTAAAGAGGAGCATTGTC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TCTTTCGGAGTGAGAGGAGCAACACTGGTGAAGTTATTGTGACCTTGGAGCCCTGTGAGCGCTCAGAAACATAC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GTGAATGGCAAGAGGGTGGCTCATCCTGTTCAGCTGCGCTCAGGGAACCGTATCATCATGGGTAAAAACCATGT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TTTTCGTTTTAACCACCCTGAACAAGCGCGAGCAGAAAGGGAAAAGACTCCCTCAGCTGAGACCCCCTCTGAGC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CTGTGGACTGGACCTTTGCTCAGAGAGAGCTTCTCGAAAAACAAGGAATTGATATGAAACAGGAGATGGAAAAG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 AGGCTTCAGGAAATGGAGATCCTTTACAAAAAGGAGAAGGAGGAAGCCGATCTTCTCCTGGAGCAGCAGAGACT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GGACTACGAGAGTAAATTGCAGGCCTTGCAGAGGCAGGTTGAGACTCGATCTCTGGCTGCAGAGACAACGGAAG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 AGGAGGAAGAGGAGGAGGAAGTTCCTTGGACACAGCATGAATTTGAGTTGGCCCAGTGGGCGTTCCGGAAATGG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 AAGTCTCACCAGTTTACTTCATTAAGGGACTTACTCTGGGGCAATGCGGTGTACCTGAAGGAAGCCAATGCCAT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 CAGTGTGGAACTAAAGAAAAAGGTGCAGTTCCAGTTTGTTCTGCTGACTGACACGCTGTACTCCCCTGTGCCTC 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 CTGAACTGCTTCCCTCGGAGATGGAGAAGACGCACGAGGACAGACCTTTCCCTCGGACTGTGGTGGCGGTGGAG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GTCCAGGATCTGAAGAATGGAGCAACACATTATTGGTCTTTGGATAAACTCAAGCAGAGACTGGATCTGATGCG 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 AGAGATGTATGACAGGGCAGGGGAGGTGGCCTCCAGTGCCCAAGATGACAGCGAGACGACCATGACCGGCAGCG 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 ACCCATTCTACGATCGGTTCCACTGGTTCAAACTTGTGGGAAGCTCCCCTATTTTCCACGGCTGTGTGAATGAG 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 CGCCTTGCCGACCGCACACCCTCCCCCACTTTTTCCACGGCCGATTCCGACATCACTGAACTGGCTGACGAGCA 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 GCAGGATGCCATGGAGGACTTTGATGATGAGGCATTCGTGGATGACACCGGCTCTGACGCAGGGACGGAAGAGG 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 GATCAGAGCTCTTCAGTGATGGGCATGACCCATTTTACGACCGATCCCCTTGGTTCATTTTAGTAGGAAGGGCA 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 TTTGTGTACTTGAGCAACCTGCTGTATCCGGTGCCCCTGATTCACAGGGTGGCCATTGTCAGTGAGAAGGGGGA 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 AGTCCGGGGATTTCTTCGTGTGGCTGTGCAGGCCATTGCAGCGGATGAAGAAGCCCCTGATTATGGCTCTGGAA 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 TCCGGCAGTCGGGAACAGCTAAAATATCTTTTGATAATGAATACTTTAATCAGAGTGACTTCTCGTCAGCTGCA 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 ATGACTCGTTCTGGTCTGTCCTTGGAGGAGCTGAGGATTGTGGAAGGTCAGGGCCAGAGTTCTGAAGTCATCAG 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 TCCTCCAGAAGAAGTCAATCGAATGAACGACCTGGATTTGAAGTCAGGCACTTTGCTGGATGGGAAGATGGTGA 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 TGGAAGGGTTTTCTGAAGAGATTGGTAACCACCTGAAGCTGGGCAGTGCCTTCACTTTCCGAGTCACTGTGCTC 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 CAAGCCAGCGGGATCCTTCCAGAGTATGCAGACATCTTCTGTCAGTTCAACTTTTTGCATCGGCATGATGAAGC 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 GTTCTCCACTGAACCCCTCAAGAACAATGGAAGAGGAAGTCCCCTGGGCTTCTACCATGTACAGAACATTGCGG 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 TGGAGGTCACAGAGTCGTTTGTGGACTACATCAAAACCAAGCCCATTGTATTCGAGGTCTTTGGGCACTACCAG 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 CAGCACCCACTCCATCTGCAAGGACAAGATCTTAACAGTCCACCTCAGCCATCTCGGAGATTCTTCCCCCCACC 3626
Query 1 -------------------------------------------ATGAGCAAAACCAGCCTTGGCCAGAGCATGA 31
||||.||||||||.||||||.||.|||||||
Sbjct 3627 CATGCCACTCTCCAAGCCAGTTCCAGCTACTAAGTTAAACACCATGAACAAAACCACCCTTGGGCAAAGCATGA 3700
Query 32 GCAAGTATGACCTCCTGGTTTGGTTTGAGATCAGTGAACTGGAGCCTACAGGAGAGTATATCCCAGCTGTGGTT 105
|||||||.|||||.|||||||||||||||||||||||||||||||||||.|||||||||||.||||||||||||
Sbjct 3701 GCAAGTACGACCTTCTGGTTTGGTTTGAGATCAGTGAACTGGAGCCTACTGGAGAGTATATTCCAGCTGTGGTT 3774
Query 106 GACCACACAGCAGGCTTGCCTTGCCAGGGGACATTTTTGCTTCATCAGGGCATCCAGCGAAGGATCACAGTGAC 179
|||||.||.||||||.||||.||||||||||||||||||||.||.|||||||||||||||.|||||||||||||
Sbjct 3775 GACCATACTGCAGGCCTGCCCTGCCAGGGGACATTTTTGCTGCACCAGGGCATCCAGCGACGGATCACAGTGAC 3848
Query 180 CATTATCCATGAGAAGGGGAGCGAGCTCCATTGGAAAGATGTTCGTGAACTGGTGGTAGGTCGTATTCGGAATA 253
.||.|||||.||||||||.||.||||||||.|||||||||||.|||||.||||||||||||||.|||.||||||
Sbjct 3849 TATCATCCACGAGAAGGGCAGTGAGCTCCACTGGAAAGATGTCCGTGAGCTGGTGGTAGGTCGGATTAGGAATA 3922
Query 254 AGCCTGAGGTGGATGAAGCTGCAGTTGATGCCATCCTCTCCCTAAATATTATTTCTGCCAAGTACCTGAAGTCT 327
|.||.|||||.||||||||||||||||||||..|.||.|||||.||.||.||.|||||.||||.|||||||.||
Sbjct 3923 AACCGGAGGTAGATGAAGCTGCAGTTGATGCTGTTCTTTCCCTGAACATCATCTCTGCTAAGTCCCTGAAGGCT 3996
Query 328 TCCCACAACTCTAGCAGGACCTTCTACCGCTTTGAGGCTGTGTGGGATAGCTCTCTGCATAACTCCCTTCTTCT 401
.||||||.|||.|||||||||||||||||.||.|||||.||.|||||.|||||.||.|||||||||||.|||||
Sbjct 3997 GCCCACAGCTCCAGCAGGACCTTCTACCGTTTCGAGGCAGTATGGGACAGCTCCCTACATAACTCCCTCCTTCT 4070
Query 402 GAACCGAGTGACACCCTATGGAGAAAAGATCTACATGACCTTGTCGGCCTACCTAGAGCTGGATCATTGCATCC 475
||||||||||||||||||||||||||||||||||||||||||.||.||.||.||.|||.|||||||||||||||
Sbjct 4071 GAACCGAGTGACACCCTATGGAGAAAAGATCTACATGACCTTATCTGCTTATCTGGAGTTGGATCATTGCATCC 4144
Query 476 AGCCGGCTGTCATCACCAAGGATGTGTGCATGGTCTTCTACTCCCGAGATGCCAAGATCTCACCACCACGCTCT 549
|||||||.||||||||.|||||||||||||||||||||||.||||||||||||||||||||||||||.||.|||
Sbjct 4145 AGCCGGCCGTCATCACTAAGGATGTGTGCATGGTCTTCTATTCCCGAGATGCCAAGATCTCACCACCGCGTTCT 4218
Query 550 CTGCGTAGCCTCTTTGGCAGCGGCTACTCAAAGTCACCAGATTCGAATCGAGTCACTGGCATTTACGAACTCAG 623
|||||.|.|||||||||.||.||||||||||||||||||||.||.||.|||||.|||||.||.||.||.||.||
Sbjct 4219 CTGCGAAACCTCTTTGGTAGTGGCTACTCAAAGTCACCAGACTCCAACCGAGTGACTGGGATCTATGAGCTGAG 4292
Query 624 CTTATGCAAAATGTCAGACACAGGTAGTCCAGGTATGCAGAGAAGGAGAAGAAAAATCTTAGATACGTCAGTGG 697
|||||||||||||.||||.||.||.||.|||||.||||||||..||||.||||||.||||.|||||.|||||||
Sbjct 4293 CTTATGCAAAATGGCAGATACTGGAAGCCCAGGCATGCAGAGGCGGAGGAGAAAAGTCTTGGATACCTCAGTGG 4366
Query 698 CATATGTGCGGGGAGAAGAGAACTTAGCAGGCTGGCGGCCCCGTGGAGACAGCCTCATCCTTGAGCACCAGTGG 771
||||||||||||||||.||||||.||||.||||||||.||.|||||||||||||||||.||.||.|||||||||
Sbjct 4367 CATATGTGCGGGGAGAGGAGAACCTAGCGGGCTGGCGACCTCGTGGAGACAGCCTCATTCTGGAACACCAGTGG 4440
Query 772 GAGCTGGAGAAGCTGGAGCTCCTACATGAGGTGGAAAAAACCCGCCACTTTTTGCTGCTGCGTGAGAGACTTGG 845
||||||||||||||||||||.||.|||||||||||||||||.||||||||.||||||||.||.|||||||||||
Sbjct 4441 GAGCTGGAGAAGCTGGAGCTGCTGCATGAGGTGGAAAAAACTCGCCACTTCTTGCTGCTTCGGGAGAGACTTGG 4514
Query 846 TGACAGCATCCCCAAATCCCTGAGCGACTCGTTATCCCCCAGCCTCAGCAGTGGGACCCTCAGCACCTCCACCA 919
|||||||.||||.||.||.|||||.|||||..|.|||||||||||.||||||||.|||||.|||||||||||||
Sbjct 4515 TGACAGCGTCCCTAAGTCTCTGAGTGACTCACTGTCCCCCAGCCTGAGCAGTGGAACCCTTAGCACCTCCACCA 4588
Query 920 GTATCTCCTCTCAGATCTCAACCACTACCTTTGAAAGCGCCATCACACCTAGCGAGAGCAGTGGCTATGATTCA 993
|.|||||||||||||||||||||||.|||||||||||||||||||||||.|||||||||||||||||.||.||.
Sbjct 4589 GCATCTCCTCTCAGATCTCAACCACCACCTTTGAAAGCGCCATCACACCGAGCGAGAGCAGTGGCTACGACTCG 4662
Query 994 GGAGACATCGAAAGCCTGGTGGACCGAGAGAAAGAGCTGGCTACCAAGTGCCTGCAACTTCTCACCCACACTTT 1067
|.||||.|.|||||||||||.|||||.|||||||||||||||||.|||||||||||.|||||||||||||||||
Sbjct 4663 GCAGACGTTGAAAGCCTGGTCGACCGGGAGAAAGAGCTGGCTACAAAGTGCCTGCAGCTTCTCACCCACACTTT 4736
Query 1068 CAACAGAGAATTCAGCCAGGTGCACGGCAGCGTCAGTGACTGTAAGTTGTCTGATATCTCTCCAATTGGACGGG 1141
||||.||||||||||||||||||||||||||.||||||||||||||||||||||.|||||||||||||||||||
Sbjct 4737 CAACCGAGAATTCAGCCAGGTGCACGGCAGCATCAGTGACTGTAAGTTGTCTGACATCTCTCCAATTGGACGGG 4810
Query 1142 ATCCCTCTGAGTCCAGTTTCAGCAGTGCCACCCTCACTCCCTCCTCCACCTGTCCCTCTCTGGTAGACTCTAGG 1215
|.|||||||.||||||||||||||||.||||||||||.|||||||||||.||.|||||..||||.|||||.|||
Sbjct 4811 ACCCCTCTGTGTCCAGTTTCAGCAGTTCCACCCTCACGCCCTCCTCCACTTGCCCCTCCTTGGTGGACTCCAGG 4884
Query 1216 AGCAACTCTCTGGATCAGAAGACCCCAGAAGCCAATTCCCGGGCCTCTAGTCCCTGCCCAGAATTTGAACAGTT 1289
||||.||||.|||||||||||||||||||||||||.||.||.|||||.||||||||||.|||||||||||||||
Sbjct 4885 AGCAGCTCTATGGATCAGAAGACCCCAGAAGCCAACTCTCGTGCCTCCAGTCCCTGCCAAGAATTTGAACAGTT 4958
Query 1290 TCAGATTGTCCCAGCTGTGGAAACACCATATTTGGCCCGAGCAGGAAAAAACGAATTTCTCAATCTTGTTCCAG 1363
||||||.||||||.|||||||.|||||.|||||||||||||||||.||.||.||||||||||||||||||||||
Sbjct 4959 TCAGATCGTCCCAACTGTGGAGACACCCTATTTGGCCCGAGCAGGGAAGAATGAATTTCTCAATCTTGTTCCAG 5032
Query 1364 ATATTGAAGAAATTAGACCAAGCTCAGTGGTCTCTAAGAAAGGATACCTTCATTTCAAGGAGCCTCTTTACAGT 1437
|.|||||||||.|.|||.|..|.||||||||.|||||||||||||||||.||||||||.|||||.||||.||||
Sbjct 5033 ACATTGAAGAAGTCAGAGCGGGATCAGTGGTATCTAAGAAAGGATACCTGCATTTCAAAGAGCCACTTTCCAGT 5106
Query 1438 AACTGGGCTAAACATTTTGTTGTCGTCCGTCGGCCTTATGTCTTCATCTATAACAGTGACAAAGACCCTGTGGA 1511
|||||||||||||||||.|||||.||.|||||.|||||.|||||||||||||||||||||||||||||.||.||
Sbjct 5107 AACTGGGCTAAACATTTCGTTGTGGTTCGTCGCCCTTACGTCTTCATCTATAACAGTGACAAAGACCCAGTAGA 5180
Query 1512 GCGTGGAATCATTAACCTGTCCACAGCACAGGTGGAGTACAGTGAGGACCAGCAGGCCATGGTGAAGACACCAA 1585
||||||.||||||||||||||.||||||||||||||||||||.|||||||||||||||||||||||||||||.|
Sbjct 5181 GCGTGGCATCATTAACCTGTCTACAGCACAGGTGGAGTACAGCGAGGACCAGCAGGCCATGGTGAAGACACCTA 5254
Query 1586 ACACATTTGCTGTCTGCACAAAGCACCGTGGGGTCCTTTTGCAGGCCCTCAATGACAAAGACATGAACGACTGG 1659
|.||.||||||||.||||||||||||||||||||||||.||||.||.||||||||||||||||||||.||||||
Sbjct 5255 ATACTTTTGCTGTATGCACAAAGCACCGTGGGGTCCTTCTGCAAGCTCTCAATGACAAAGACATGAATGACTGG 5328
Query 1660 TTGTATGCCTTCAACCCACTTCTAGCTGGCACAATACGGTCAAAGCTTTCCCGCAGATGCCCGAGCCAGTCGAA 1733
||.||||||||.|||||||||||.||||||||||||.|||||||.||.||.||||||||||||||||||.|.||
Sbjct 5329 TTATATGCCTTTAACCCACTTCTGGCTGGCACAATAAGGTCAAAACTCTCTCGCAGATGCCCGAGCCAGCCAAA 5402
Query 1734 ATAC 1737
.|||
Sbjct 5403 GTAC 5406
