Nucleotide Global Alignment
Description
- Query:
- TRCN0000469162
- Subject:
- XM_006538595.3
- Aligned Length:
- 5079
- Identities:
- 1546
- Gaps:
- 3342
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGTCGGGAGCCTCTGTGAAGGTCGCTGTTCGAGTGAGGCCCTTCAATTCTCGAGAGACCAGCAAGGAGTCCAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTGCATCATTCAGATGCAAGGCAACTCGACCAGTATTATTAACCCAAAGAACCCAAAGGAAGCACCAAAGTCCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCAGCTTTGACTACTCCTACTGGTCCCACACCTCGCCTGAAGATCCCTGTTTTGCATCGCAGAATCGTGTGTAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AATGACATTGGAAAGGAAATGCTCTTACATGCCTTTGAAGGTTATAATGTCTGTATCTTTGCCTATGGGCAGAC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGGTGCTGGGAAATCCTACACGATGATGGGGAAACAAGAAGAGAGCCAAGCTGGAATCATCCCACAGTTGTGTG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AAGAACTCTTTGAGAAGATCAATGACAATTGTAATGAAGAAATGTCTTACTCTGTAGAGGTGAGCTACATGGAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ATTTACTGTGAGAGAGTACGAGATTTACTGAATCCCAAAAACAAGGGTAACTTGCGTGTGCGTGAACACCCGCT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TCTTGGACCCTATGTGGAGGATCTGTCCAAGCTGGCGGTCACCTCCTACACTGACATCGCTGACCTGATGGATG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CTGGGAACAAAGCCAGGACTGTGGCAGCTACCAACATGAATGAGACAAGCAGCCGTTCTCACGCTGTGTTCACC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ATTGTCTTTACCCAGAAGAAACAGGATCCTGAGACGAACCTTTCTACTGAGAAGGTCAGTAAAATCAGCTTGGT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GGATCTAGCAGGAAGTGAACGGGCTGATTCAACTGGTGCCAAAGGAACTCGATTAAAGGAAGGTGCAAATATCA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ATAAGTCCCTTACAACTTTGGGCAAAGTCATTTCGGCCTTGGCAGAGGTGGATAACTGCACAAGCAAGAGTAAA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AAGAAGAAGAAAACTGATTTTATTCCTTATAGGGATTCTGTACTTACTTGGCTCCTTCGAGAAAATCTCGGTGG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CAACTCCCGAACTGCAATGGTTGCTGCTCTGAGCCCAGCCGACATCAACTACGATGAAACTTTGAGCACACTGA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GATACGCAGATCGTGCAAAACAAATTAAATGCAATGCTGTTATCAATGAGGACCCGAATGCCAAGCTGGTTCGG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GAGTTGAAGGAGGAAGTGACCCGACTGAAGGACCTTCTTCGTGCTCAGGGACTGGGAGATATTATTGATACATC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CATGGGGTCCCTCACTTCATCTCCATCTTCATGCTCACTTAATAGTCAGGTGGGCTTAACATCTGTGACCAGTA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TTCAGGAGAGGATCATGTCTACACCTGGAGGGGAGGAAGCCATTGAACGTCTGAAGGAGTCAGAGAAGATCATT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GCTGAGTTGAATGAAACCTGGGAAGAGAAACTTCGTAAAACAGAGGCCATCAGAATGGAGAGAGAAGCCTTGTT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GGCTGAGATGGGAGTTGCCATACGGGAAGATGGGGGGACACTTGGAGTTTTCTCTCCTAAAAAGACCCCACATC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TTGTTAACCTCAATGAAGACCCATTAATGTCGGAGTGTTTGCTCTATTACATCAAGGATGGAATTACAAGGGTT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GGCCAGGCAGATGCTGAGCGGCGCCAGGACATAGTGCTGAGTGGGGCCCACATTAAAGAGGAGCATTGTCTCTT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TCGGAGTGAGAGGAGCAACACTGGTGAAGTTATTGTGACCTTGGAGCCCTGTGAGCGCTCAGAAACATACGTGA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 ATGGCAAGAGGGTGGCTCATCCTGTTCAGCTGCGCTCAGGGAACCGTATCATCATGGGTAAAAACCATGTTTTT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CGTTTTAACCACCCTGAACAAGCGCGAGCAGAAAGGGAAAAGACTCCCTCAGCTGAGACCCCCTCTGAGCCTGT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GGACTGGACCTTTGCTCAGAGAGAGCTTCTCGAAAAACAAGGAATTGATATGAAACAGGAGATGGAAAAGAGGC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TTCAGGAAATGGAGATCCTTTACAAAAAGGAGAAGGAGGAAGCCGATCTTCTCCTGGAGCAGCAGAGACTGGAC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TACGAGAGTAAATTGCAGGCCTTGCAGAGGCAGGTTGAGACTCGATCTCTGGCTGCAGAGACAACGGAAGAGGA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GGAAGAGGAGGAGGAAGTTCCTTGGACACAGCATGAATTTGAGTTGGCCCAGTGGGCGTTCCGGAAATGGAAGT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CTCACCAGTTTACTTCATTAAGGGACTTACTCTGGGGCAATGCGGTGTACCTGAAGGAAGCCAATGCCATCAGT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GTGGAACTAAAGAAAAAGGTGCAGTTCCAGTTTGTTCTGCTGACTGACACGCTGTACTCCCCTGTGCCTCCTGA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 ACTGCTTCCCTCGGAGATGGAGAAGACGCACGAGGACAGACCTTTCCCTCGGACTGTGGTGGCGGTGGAGGTCC 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 AGGATCTGAAGAATGGAGCAACACATTATTGGTCTTTGGATAAACTCAAGCAGAGACTGGATCTGATGCGAGAG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 ATGTATGACAGGGCAGGGGAGGTGGCCTCCAGTGCCCAAGATGACAGCGAGACGACCATGACCGGCAGCGACCC 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 ATTCTACGATCGGTTCCACTGGTTCAAACTTGTGGGAAGGGCATTTGTGTACTTGAGCAACCTGCTGTATCCGG 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 TGCCCCTGATTCACAGGGTGGCCATTGTCAGTGAGAAGGGGGAAGTCCGGGGATTTCTTCGTGTGGCTGTGCAG 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 GCCATTGCAGCGGATGAAGAAGCCCCTGATTATGGCTCTGGAATCCGGCAGTCGGGAACAGCTAAAATATCTTT 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TGATAATGAATACTTTAATCAGAGTGACTTCTCGTCAGCTGCAATGACTCGTTCTGGTCTGTCCTTGGAGGAGC 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 TGAGGATTGTGGAAGGTCAGGGCCAGAGTTCTGAAGTCATCAGTCCTCCAGAAGAAGTCAATCGAATGAACGAC 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 CTGGATTTGAAGTCAGGCACTTTGCTGGATGGGAAGATGGTGATGGAAGGGTTTTCTGAAGAGATTGGTAACCA 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 CCTGAAGCTGGGCAGTGCCTTCACTTTCCGAGTCACTGTGCTCCAAGCCAGCGGGATCCTTCCAGAGTATGCAG 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 ACATCTTCTGTCAGTTCAACTTTTTGCATCGGCATGATGAAGCGTTCTCCACTGAACCCCTCAAGAACAATGGA 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 AGAGGAAGTCCCCTGGGCTTCTACCATGTACAGAACATTGCGGTGGAGGTCACAGAGTCGTTTGTGGACTACAT 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 CAAAACCAAGCCCATTGTATTCGAGGTCTTTGGGCACTACCAGCAGCACCCACTCCATCTGCAAGGACAAGATC 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 TTAACAGTCCACCTCAGCCATCTCGGAGATTCTTCCCCCCACCCATGCCACTCTCCAAGCCAGTTCCAGCTACT 3330
Query 1 ------------ATGAGCAAAACCAGCCTTGGCCAGAGCATGAGCAAGTATGACCTCCTGGTTTGGTTTGAGAT 62
||||.||||||||.||||||.||.||||||||||||||.|||||.|||||||||||||||||
Sbjct 3331 AAGTTAAACACCATGAACAAAACCACCCTTGGGCAAAGCATGAGCAAGTACGACCTTCTGGTTTGGTTTGAGAT 3404
Query 63 CAGTGAACTGGAGCCTACAGGAGAGTATATCCCAGCTGTGGTTGACCACACAGCAGGCTTGCCTTGCCAGGGGA 136
||||||||||||||||||.|||||||||||.|||||||||||||||||.||.||||||.||||.||||||||||
Sbjct 3405 CAGTGAACTGGAGCCTACTGGAGAGTATATTCCAGCTGTGGTTGACCATACTGCAGGCCTGCCCTGCCAGGGGA 3478
Query 137 CATTTTTGCTTCATCAGGGCATCCAGCGAAGGATCACAGTGACCATTATCCATGAGAAGGGGAGCGAGCTCCAT 210
||||||||||.||.|||||||||||||||.|||||||||||||.||.|||||.||||||||.||.||||||||.
Sbjct 3479 CATTTTTGCTGCACCAGGGCATCCAGCGACGGATCACAGTGACTATCATCCACGAGAAGGGCAGTGAGCTCCAC 3552
Query 211 TGGAAAGATGTTCGTGAACTGGTGGTAGGTCGTATTCGGAATAAGCCTGAGGTGGATGAAGCTGCAGTTGATGC 284
|||||||||||.|||||.||||||||||||||.|||.|||||||.||.|||||.||||||||||||||||||||
Sbjct 3553 TGGAAAGATGTCCGTGAGCTGGTGGTAGGTCGGATTAGGAATAAACCGGAGGTAGATGAAGCTGCAGTTGATGC 3626
Query 285 CATCCTCTCCCTAAATATTATTTCTGCCAAGTACCTGAAGTCTTCCCACAACTCTAGCAGGACCTTCTACCGCT 358
..|.||.|||||.||.||.||.|||||.||||.|||||||.||.||||||.|||.|||||||||||||||||.|
Sbjct 3627 TGTTCTTTCCCTGAACATCATCTCTGCTAAGTCCCTGAAGGCTGCCCACAGCTCCAGCAGGACCTTCTACCGTT 3700
Query 359 TTGAGGCTGTGTGGGATAGCTCTCTGCATAACTCCCTTCTTCTGAACCGAGTGACACCCTATGGAGAAAAGATC 432
|.|||||.||.|||||.|||||.||.|||||||||||.||||||||||||||||||||||||||||||||||||
Sbjct 3701 TCGAGGCAGTATGGGACAGCTCCCTACATAACTCCCTCCTTCTGAACCGAGTGACACCCTATGGAGAAAAGATC 3774
Query 433 TACATGACCTTGTCGGCCTACCTAGAGCTGGATCATTGCATCCAGCCGGCTGTCATCACCAAGGATGTGTGCAT 506
|||||||||||.||.||.||.||.|||.||||||||||||||||||||||.||||||||.||||||||||||||
Sbjct 3775 TACATGACCTTATCTGCTTATCTGGAGTTGGATCATTGCATCCAGCCGGCCGTCATCACTAAGGATGTGTGCAT 3848
Query 507 GGTCTTCTACTCCCGAGATGCCAAGATCTCACCACCACGCTCTCTGCGTAGCCTCTTTGGCAGCGGCTACTCAA 580
|||||||||.||||||||||||||||||||||||||.||.||||||||.|.|||||||||.||.||||||||||
Sbjct 3849 GGTCTTCTATTCCCGAGATGCCAAGATCTCACCACCGCGTTCTCTGCGAAACCTCTTTGGTAGTGGCTACTCAA 3922
Query 581 AGTCACCAGATTCGAATCGAGTCACTGGCATTTACGAACTCAGCTTATGCAAAATGTCAGACACAGGTAGTCCA 654
||||||||||.||.||.|||||.|||||.||.||.||.||.|||||||||||||||.||||.||.||.||.|||
Sbjct 3923 AGTCACCAGACTCCAACCGAGTGACTGGGATCTATGAGCTGAGCTTATGCAAAATGGCAGATACTGGAAGCCCA 3996
Query 655 GGTATGCAGAGAAGGAGAAGAAAAATCTTAGATACGTCAGTGGCATATGTGCGGGGAGAAGAGAACTTAGCAGG 728
||.||||||||..||||.||||||.||||.|||||.|||||||||||||||||||||||.||||||.||||.||
Sbjct 3997 GGCATGCAGAGGCGGAGGAGAAAAGTCTTGGATACCTCAGTGGCATATGTGCGGGGAGAGGAGAACCTAGCGGG 4070
Query 729 CTGGCGGCCCCGTGGAGACAGCCTCATCCTTGAGCACCAGTGGGAGCTGGAGAAGCTGGAGCTCCTACATGAGG 802
||||||.||.|||||||||||||||||.||.||.|||||||||||||||||||||||||||||.||.|||||||
Sbjct 4071 CTGGCGACCTCGTGGAGACAGCCTCATTCTGGAACACCAGTGGGAGCTGGAGAAGCTGGAGCTGCTGCATGAGG 4144
Query 803 TGGAAAAAACCCGCCACTTTTTGCTGCTGCGTGAGAGACTTGGTGACAGCATCCCCAAATCCCTGAGCGACTCG 876
||||||||||.||||||||.||||||||.||.||||||||||||||||||.||||.||.||.|||||.|||||.
Sbjct 4145 TGGAAAAAACTCGCCACTTCTTGCTGCTTCGGGAGAGACTTGGTGACAGCGTCCCTAAGTCTCTGAGTGACTCA 4218
Query 877 TTATCCCCCAGCCTCAGCAGTGGGACCCTCAGCACCTCCACCAGTATCTCCTCTCAGATCTCAACCACTACCTT 950
.|.|||||||||||.||||||||.|||||.||||||||||||||.|||||||||||||||||||||||.|||||
Sbjct 4219 CTGTCCCCCAGCCTGAGCAGTGGAACCCTTAGCACCTCCACCAGCATCTCCTCTCAGATCTCAACCACCACCTT 4292
Query 951 TGAAAGCGCCATCACACCTAGCGAGAGCAGTGGCTATGATTCAGGAGACATCGAAAGCCTGGTGGACCGAGAGA 1024
||||||||||||||||||.|||||||||||||||||.||.||.|.||||.|.|||||||||||.|||||.||||
Sbjct 4293 TGAAAGCGCCATCACACCGAGCGAGAGCAGTGGCTACGACTCGGCAGACGTTGAAAGCCTGGTCGACCGGGAGA 4366
Query 1025 AAGAGCTGGCTACCAAGTGCCTGCAACTTCTCACCCACACTTTCAACAGAGAATTCAGCCAGGTGCACGGCAGC 1098
|||||||||||||.|||||||||||.|||||||||||||||||||||.||||||||||||||||||||||||||
Sbjct 4367 AAGAGCTGGCTACAAAGTGCCTGCAGCTTCTCACCCACACTTTCAACCGAGAATTCAGCCAGGTGCACGGCAGC 4440
Query 1099 GTCAGTGACTGTAAGTTGTCTGATATCTCTCCAATTGGACGGGATCCCTCTGAGTCCAGTTTCAGCAGTGCCAC 1172
.||||||||||||||||||||||.||||||||||||||||||||.|||||||.||||||||||||||||.||||
Sbjct 4441 ATCAGTGACTGTAAGTTGTCTGACATCTCTCCAATTGGACGGGACCCCTCTGTGTCCAGTTTCAGCAGTTCCAC 4514
Query 1173 CCTCACTCCCTCCTCCACCTGTCCCTCTCTGGTAGACTCTAGGAGCAACTCTCTGGATCAGAAGACCCCAGAAG 1246
||||||.|||||||||||.||.|||||..||||.|||||.|||||||.||||.|||||||||||||||||||||
Sbjct 4515 CCTCACGCCCTCCTCCACTTGCCCCTCCTTGGTGGACTCCAGGAGCAGCTCTATGGATCAGAAGACCCCAGAAG 4588
Query 1247 CCAATTCCCGGGCCTCTAGTCCCTGCCCAGAATTTGAACAGTTTCAGATTGTCCCAGCTGTGGAAACACCATAT 1320
||||.||.||.|||||.||||||||||.|||||||||||||||||||||.||||||.|||||||.|||||.|||
Sbjct 4589 CCAACTCTCGTGCCTCCAGTCCCTGCCAAGAATTTGAACAGTTTCAGATCGTCCCAACTGTGGAGACACCCTAT 4662
Query 1321 TTGGCCCGAGCAGGAAAAAACGAATTTCTCAATCTTGTTCCAGATATTGAAGAAATTAGACCAAGCTCAGTGGT 1394
||||||||||||||.||.||.|||||||||||||||||||||||.|||||||||.|.|||.|..|.||||||||
Sbjct 4663 TTGGCCCGAGCAGGGAAGAATGAATTTCTCAATCTTGTTCCAGACATTGAAGAAGTCAGAGCGGGATCAGTGGT 4736
Query 1395 CTCTAAGAAAGGATACCTTCATTTCAAGGAGCCTCTTTACAGTAACTGGGCTAAACATTTTGTTGTCGTCCGTC 1468
.|||||||||||||||||.||||||||.|||||.||||.|||||||||||||||||||||.|||||.||.||||
Sbjct 4737 ATCTAAGAAAGGATACCTGCATTTCAAAGAGCCACTTTCCAGTAACTGGGCTAAACATTTCGTTGTGGTTCGTC 4810
Query 1469 GGCCTTATGTCTTCATCTATAACAGTGACAAAGACCCTGTGGAGCGTGGAATCATTAACCTGTCCACAGCACAG 1542
|.|||||.|||||||||||||||||||||||||||||.||.||||||||.||||||||||||||.|||||||||
Sbjct 4811 GCCCTTACGTCTTCATCTATAACAGTGACAAAGACCCAGTAGAGCGTGGCATCATTAACCTGTCTACAGCACAG 4884
Query 1543 GTGGAGTACAGTGAGGACCAGCAGGCCATGGTGAAGACACCAAACACATTTGCTGTCTGCACAAAGCACCGTGG 1616
|||||||||||.|||||||||||||||||||||||||||||.||.||.||||||||.|||||||||||||||||
Sbjct 4885 GTGGAGTACAGCGAGGACCAGCAGGCCATGGTGAAGACACCTAATACTTTTGCTGTATGCACAAAGCACCGTGG 4958
Query 1617 GGTCCTTTTGCAGGCCCTCAATGACAAAGACATGAACGACTGGTTGTATGCCTTCAACCCACTTCTAGCTGGCA 1690
|||||||.||||.||.||||||||||||||||||||.||||||||.||||||||.|||||||||||.|||||||
Sbjct 4959 GGTCCTTCTGCAAGCTCTCAATGACAAAGACATGAATGACTGGTTATATGCCTTTAACCCACTTCTGGCTGGCA 5032
Query 1691 CAATACGGTCAAAGCTTTCCCGCAGATGCCCGAGCCAGTCGAAATAC 1737
|||||.|||||||.||.||.||||||||||||||||||.|.||.|||
Sbjct 5033 CAATAAGGTCAAAACTCTCTCGCAGATGCCCGAGCCAGCCAAAGTAC 5079
