Nucleotide Global Alignment

Description

Query:
TRCN0000469219
Subject:
XM_006530394.3
Aligned Length:
2505
Identities:
1742
Gaps:
561

Alignment

Query    1  ATGACGGATGAACAGGTGTGCGAGACTGTGGAGAAATACGGAGCCAACCGGGAGGAGTGTGCCCGCCTCAACGC  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  CTCCCTCTCCTGCCTCAGGAATGTCCACATGTCAGGAGGCAACCTTTCCAAACAAGACTGGACCATCCAGTGGC  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  CCACCACAGAGACGGGGAAGGAGAACAATCCCGTGTGCCCCCCGGAGCCCACCCCGTGGATCCGCACCCATCTC  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  TCCCAGAGCCCCAGGGTCCCGTCCAAGTGCGTCCAGCACTATTGTCACACCAGCCCCACTCCCGGGGCCCCTGT  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  GTACACCCACGTGGACAGGCTTACCGTGGACGCCTACCCGGGCTTGTGCCCGCCCCCGCCACTGGAGTCGGGCC  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  ACCGTTCCCTGCCCCCATCGCCCCGGCAGCGGCACGCGGTCCGCACCCCGCCGCGCACCCCCAACATCGTCACC  444
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  445  ACCGTGACCCCGCCGGGCACGCCGCCCATGAGGAAGAAGAACAAGCTGAAGCCCCCGGGGA-------CCCCAC  511
                                       |||             |.|||.|  |||.|.|||       ||.|| 
Sbjct    1  ---------------------------ATG-------------ATCTGCA--CCCTGTGGAGGTTGGTCCTCA-  31

Query  512  CGCCCTCCTCCCGAAAACTGATACACTTGATCCCGGGATTCACCGCGCTGCATCGGAGCAAATCCCACGAGT-T  584
             |||||..||||  ||.|                             ||.|.||.||           |||| |
Sbjct   32  -GCCCTAGTCCC--AAGC-----------------------------CTCCTTCAGA-----------GAGTCT  62

Query  585  CCAGCTGGGGCACCGC-GTGGACGAG-GCCCACACGCCCAA-------AGCCAAGAAG-AGAGCAAACCCTTGA  648
            .||.|.||..||||.| |.|| |||| |           ||       |||||||||| |||||||||||||||
Sbjct   63  ACACCAGGCCCACCACAGAGG-CGAGAG-----------AATTTTTGGAGCCAAGAAGAAGAGCAAACCCTTGA  124

Query  649  ACCTCAAGATCCACAGCAGCGTAGGCAGCTGCGAGAACATCCCCTCTCAGCAGCGCTTCCCGCTGCTGTCCGAG  722
            |||||||||||||||||.||||.|||||||||||||||||||||.|.|||||.||||..|||||.|||||||||
Sbjct  125  ACCTCAAGATCCACAGCGGCGTGGGCAGCTGCGAGAACATCCCCGCCCAGCAACGCTCTCCGCTCCTGTCCGAG  198

Query  723  CGCTCCCTCCGCTCCTTCTTTGTGGGACACGCACCTTTCCTGCCTTCCACCCCTCCTGTTCACACTGAGGCCAA  796
            ||||||.|.||.||||||||||||||.||||..||.||||||||.||||||||.|||||.||||||||.|||||
Sbjct  199  CGCTCCTTGCGGTCCTTCTTTGTGGGCCACGGGCCCTTCCTGCCCTCCACCCCACCTGTCCACACTGAAGCCAA  272

Query  797  CTTCTCTGCAAACACACTGTCAGTGCCACGCTGGTCCCCGCAGATCCCTCGCAGAGATCTCGGCAACTCCATCA  870
            .|||||||||||||||||.||.||.||.||||||||.||.||||||||.||||||||.||.|||||.|||||||
Sbjct  273  TTTCTCTGCAAACACACTCTCTGTACCTCGCTGGTCACCACAGATCCCACGCAGAGACCTTGGCAATTCCATCA  346

Query  871  AGCACAGGTTTTCCACCAAGTACTGGATGTCTCAGACGTGCACAGTCTGTGGGAAAGGGATGCTTTTTGGCCTC  944
            |||||||||||||||||||||||||||||||||||||||||||.|||||.||||||||||||||||||||||||
Sbjct  347  AGCACAGGTTTTCCACCAAGTACTGGATGTCTCAGACGTGCACGGTCTGCGGGAAAGGGATGCTTTTTGGCCTC  420

Query  945  AAGTGTAAAAACTGCAAGTTAAAGTGCCACAACAAATGCACCAAAGAAGCCCCACCCTGTCATCTTCTGATCAT  1018
            ||||||||||||||||||||||||||||||||.||||||||||||||||||||.||||||||.||.|||||.||
Sbjct  421  AAGTGTAAAAACTGCAAGTTAAAGTGCCACAATAAATGCACCAAAGAAGCCCCGCCCTGTCACCTCCTGATTAT  494

Query 1019  CCACCGAGGAGATCCAGCAAGGTTAGTCCGGACAGAGTCCGTTCCGTGTGACATCAACAACCCTCTACGGAAGC  1092
            ||||||||||||.||||||||||||||.||.||.|||||.||.||.|||||||||||||||||..|.|||||||
Sbjct  495  CCACCGAGGAGACCCAGCAAGGTTAGTGCGAACGGAGTCGGTGCCCTGTGACATCAACAACCCGGTCCGGAAGC  568

Query 1093  CACCTCGCTATTCAGACCTGCACATCAGTCAGACGCTCCCCAAAACCAACAAAATCAACAAGGACCACATCCCT  1166
            |..|.||.||||||||.||.||||||||||||||.|||||||||||||||||||||||||||||||||||||||
Sbjct  569  CTGCCCGATATTCAGATCTCCACATCAGTCAGACTCTCCCCAAAACCAACAAAATCAACAAGGACCACATCCCT  642

Query 1167  GTCCCTTACCAGCCAGACTCCAGCAGCAACCCCTCCTCCACGACGTCCTCCACGCCCTCCTCGCCAGCACCCCC  1240
            |||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||.||.||||||||
Sbjct  643  GTCCCTTACCAGCCAGACTCCAGCAGCAATCCCTCCTCCACGACGTCCTCCACGCCCTCCTCACCGGCACCCCC  716

Query 1241  CCTCCCTCCTAGTGCCACGCCGCCTTCTCCCCTACACCCTTCCCCACAGTGCACACGGCAGCAGAAGAACTTCA  1314
            |||||||||.||.||||||||||||||||||||.|||||.|||||.||||||.|..|.|||.|.||||||||||
Sbjct  717  CCTCCCTCCCAGCGCCACGCCGCCTTCTCCCCTGCACCCCTCCCCGCAGTGCCCGAGACAGAAAAAGAACTTCA  790

Query 1315  ACCTGCCAGCATCCCACTACTACAAATACAAGCAGCAGTTCATCTTCCCAGATGTGGTGCCGGTGCCGGAGACG  1388
            ||||||||||.|||||||||||||||||||||||.||||||||||||||||||||||||||.||.||.|||||.
Sbjct  791  ACCTGCCAGCTTCCCACTACTACAAATACAAGCAACAGTTCATCTTCCCAGATGTGGTGCCTGTACCAGAGACA  864

Query 1389  CCGACCCGGGCGCCCCAGGTCATCCTGCATCCGGTGACCTCGAATCCAATCTTGGAAGGAAATCCATTACTTCA  1462
            ||.||||||||.|||||.||||||||||||||.||.|||||.|||.||||||||||||||||.|||||||||||
Sbjct  865  CCCACCCGGGCACCCCAAGTCATCCTGCATCCTGTCACCTCAAATACAATCTTGGAAGGAAACCCATTACTTCA  938

Query 1463  AATTGAAGTGGAGCCAACGTCGGAGAATGAAGAGGTCCATGATGAGGCCGAAGAGTCAGAGGATGACTTCGAGG  1536
            ||||||||||||.|||||.||.|||||.||||||..|||..||||.||.||.|||||.|||||.||.||.||.|
Sbjct  939  AATTGAAGTGGAACCAACCTCCGAGAACGAAGAGAGCCACAATGAAGCAGAGGAGTCCGAGGACGAGTTTGAAG  1012

Query 1537  AGATGAACCTGTCCCTCCTCTCGGCCCGGAGCTTCCCACGCAAGGCCAGCCAGACCAGCATCTTCCTTCAGGAG  1610
            ||||||||||.|||||||||||.||||||||||||||||||||.||||||||||||||||||||||||||||||
Sbjct 1013  AGATGAACCTATCCCTCCTCTCAGCCCGGAGCTTCCCACGCAAAGCCAGCCAGACCAGCATCTTCCTTCAGGAG  1086

Query 1611  TGGGACATCCCCTTTGAGCAGCTGGAGATCGGCGAGCTCATTGGAAAGGGCCGCTTTGGGCAAGTGTACCACGG  1684
            |||||||||||.|||||.|||||.|||||.|||||||||||.||.|||||.|||||.|||||.||.||||||||
Sbjct 1087  TGGGACATCCCGTTTGAACAGCTAGAGATTGGCGAGCTCATCGGGAAGGGTCGCTTCGGGCAGGTTTACCACGG  1160

Query 1685  CCGCTGGCATGGCGAGGTGGCCATCCGGCTGATTGACATTGAGAGGGACAACGAGGACCAGCTCAAGGCCTTCA  1758
            .||||||||.||||||||||||||||||.||||||||||.|||||||||||.|||||||||||.||||||||||
Sbjct 1161  ACGCTGGCACGGCGAGGTGGCCATCCGGTTGATTGACATAGAGAGGGACAATGAGGACCAGCTTAAGGCCTTCA  1234

Query 1759  AGCGGGAGGTGATGGCCTACAGGCAGACACGGCATGAGAACGTGGTGCTTTTCATGGGTGCCTGCATGAGCCCG  1832
            |||||||.||||||||||||||||||||..||||.||||||||||||||.||||||||.||||||||||||||.
Sbjct 1235  AGCGGGAAGTGATGGCCTACAGGCAGACGAGGCACGAGAACGTGGTGCTCTTCATGGGAGCCTGCATGAGCCCA  1308

Query 1833  CCTCACCTGGCCCATCATCACCAGCCTCTGTAAGGGACGGACGCTCTATTCCGTTGTGAGGGATGCCAAAATCG  1906
            ||.|||.||| |||||||||||||||||||||||||||||||.|||||.||.||.||||||||.|||||.||.|
Sbjct 1309  CCCCACTTGG-CCATCATCACCAGCCTCTGTAAGGGACGGACACTCTACTCTGTGGTGAGGGACGCCAAGATTG  1381

Query 1907  TTTTGGATGTCAACAAAACCAGGCAGATTGCTCAAGAAATTGTGAAGGGCATGGGCTACCTCCACGCCAAGGGA  1980
            |.||||||||||||||||||||||||||.||.|||||.|||||.|||||||||||||||||||||||||||||.
Sbjct 1382  TCTTGGATGTCAACAAAACCAGGCAGATCGCGCAAGAGATTGTAAAGGGCATGGGCTACCTCCACGCCAAGGGG  1455

Query 1981  ATCCTACACAAGGACCTCAAGTCAAAGAACGTCTTCTATGACAACGGCAAAGTGGTCATCACGGACTTTGGACT  2054
            |||||.||.|||||||||||.||.||||||||||||||||||||||||||||||||||||||.||||||||.||
Sbjct 1456  ATCCTTCATAAGGACCTCAAATCGAAGAACGTCTTCTATGACAACGGCAAAGTGGTCATCACAGACTTTGGGCT  1529

Query 2055  CTTCAGCATTTCTGGGGTGCTGCAGGCTGGCAGGCGGGAGGACAAACTGCGCATCCAGAATGGCTGGCTATGCC  2128
            ||||||||||||.||||||||||||||||||.|||||||.|||||||||||.||||||||.||||||||.||.|
Sbjct 1530  CTTCAGCATTTCCGGGGTGCTGCAGGCTGGCCGGCGGGACGACAAACTGCGGATCCAGAACGGCTGGCTGTGTC  1603

Query 2129  ACCTGGCACCAGAGATCATCCGCCAGCTGTCCCCCGACACAGAGGAGGATAAGCTCCCCTTCTCCAAGCACTCT  2202
            |||||||.|||||.||||||||||||||||||||.||||||||.|||||.||||||||.||||||||||||||.
Sbjct 1604  ACCTGGCCCCAGAAATCATCCGCCAGCTGTCCCCTGACACAGAAGAGGACAAGCTCCCATTCTCCAAGCACTCG  1677

Query 2203  GACGTCTTTGCCCTTGGCACAATCTGGTATGAACTCCACGCCAGGGAATGGCCTTTCAAGACCCAACCAGCAGA  2276
            ||.||||||||.||||||||.|||||||||||.||||||||||||||.|||||.||||||||||||||||||||
Sbjct 1678  GATGTCTTTGCGCTTGGCACCATCTGGTATGAGCTCCACGCCAGGGAGTGGCCATTCAAGACCCAACCAGCAGA  1751

Query 2277  GGCAATAATCTGGCAAATGGGCACAGGCATGAAACCCAACCTCAGCCAGATTGGCATGGGAAAAGAAATCTCGG  2350
            ||||||.||.|||||.||||||||.||.|||||.||||||||||||||||||||||||||||||||||||||||
Sbjct 1752  GGCAATCATTTGGCAGATGGGCACGGGAATGAAGCCCAACCTCAGCCAGATTGGCATGGGAAAAGAAATCTCGG  1825

Query 2351  ACATTCTTCTCTTCTGCTGGGCCTTTGAACAAGAAGAGAGACCTACCTTCACCAAGCTCATGGACATGCTGGAG  2424
            ||||.||.|||||||||||||||||.||.||.||||||.|.||.|||||.||||||||||||||||||||.|||
Sbjct 1826  ACATACTGCTCTTCTGCTGGGCCTTCGAGCAGGAAGAGCGGCCCACCTTTACCAAGCTCATGGACATGCTAGAG  1899

Query 2425  AAACTGCCAAAGCGAAACCGTCGCCTGTCTCACCCTGGACATTTCTGGAAGTCTGCAGAGCTG  2487
            ||||||||||||||||||||.||||||||.|||||.|||||||||||||||||||||||||||
Sbjct 1900  AAACTGCCAAAGCGAAACCGCCGCCTGTCGCACCCCGGACATTTCTGGAAGTCTGCAGAGCTG  1962

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