Nucleotide Global Alignment

Description

Query:
TRCN0000469293
Subject:
XR_001754265.1
Aligned Length:
1542
Identities:
1117
Gaps:
425

Alignment

Query    1  ----------------------------ATGGCGGCATTGAGCGGAGTCCGCTGGCTGACCCGAGCGCTGGTCT  46
                                        ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ACTTCCCACGCGACTTCCTGCGGGAAACATGGCGGCATTGAGCGGAGTCCGCTGGCTGACCCGAGCGCTGGTCT  74

Query   47  CCGCCGGGAACCCTGGGGCATGGAGAGGTCTGAGTACCTCGGCCGCGGCGCACGCTGCATCGCGGAGCCAGGCC  120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CCGCCGGGAACCCTGGGGCATGGAGAGGTCTGAGTACCTCGGCCGCGGCGCACGCTGCATCGCGGAGCCAGGCC  148

Query  121  GAGGACGTGAGGGTGGAGGGCTCCTTTCCCGTGACCATGCTTCCGGGAGACGGTGTGGGGCCTGAGCTGATGCA  194
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  GAGGACGTGAGGGTGGAGGGCTCCTTTCCCGTGACCATGCTTCCGGGAGACGGTGTGGGGCCTGAGCTGATGCA  222

Query  195  CGCCGTCAAGGAGGTGTTCAAGGCTGCCGCTGTCCCAGTGGAGTTCCAGGAGCACCACCTGAGTGAGGTGCAGA  268
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CGCCGTCAAGGAGGTGTTCAAGGCTGCCGCTGTCCCAGTGGAGTTCCAGGAGCACCACCTGAGTGAGGTGCAGA  296

Query  269  ATATGGCATCTGAGGAGAAGCTGGAGCAGGTGCTGAGTTCCATGAAGGAGAACAAAGTGGCCATCATTGGAAAG  342
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  ATATGGCATCTGAGGAGAAGCTGGAGCAGGTGCTGAGTTCCATGAAGGAGAACAAAGTGGCCATCATTGGAAAG  370

Query  343  ATTCATACCCCGATGGAGTATAAGGGGGAGCTAGCCTCCTATGATATGCGGCTGAGGCGTAAGTTGGACTTATT  416
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  ATTCATACCCCGATGGAGTATAAGGGGGAGCTAGCCTCCTATGATATGCGGCTGAGGCGTAAGTTGGACTTATT  444

Query  417  TGCCAACGTAGTCCATGTGAAGTCACTTCCTGGGTATATGACTCGGCACAACAATCTAGACCTGGTGATCATTC  490
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  TGCCAACGTAGTCCATGTGAAGTCACTTCCTGGGTATATGACTCGGCACAACAATCTAGACCTGGTGATCATTC  518

Query  491  GAGAGCAGACAGAAGGGGAGTACAGCTCTCTGGAACATGAGAGTGCAAGGGGTGTGATTGAGTGTTTGAAGATT  564
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GAGAGCAGACAGAAGGGGAGTACAGCTCTCTGGAACATGAGAGTGCAAGGGGTGTGATTGAGTGTTTGAAGATT  592

Query  565  GTCACACGAGCCAAGTCTCAGCGGATTGCAAAGTTCGCCTTTGACTATGCCACCAAGAAGGGGCGGGGCAAGGT  638
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  GTCACACGAGCCAAGTCTCAGCGGATTGCAAAGTTCGCCTTTGACTATGCCACCAAGAAGGGGCGGGGCAAGGT  666

Query  639  CACTGCTGTCCACAAGGCCAACATCATGAAACTTGGGGATGGGTTGTTCCTGCAGTGCTGTGAGGAAGTTGCTG  712
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  CACTGCTGTCCACAAGGCCAACATCATGAAACTTGGGGATGGGTTGTTCCTGCAGTGCTGTGAGGAAGTTGCTG  740

Query  713  AACTGTACCCCAAAATCAAATTTGAGACAATGATCATAGACAACTGCTGCATGCAGCTGGTGCAGAATCCTTAC  786
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  AACTGTACCCCAAAATCAAATTTGAGACAATGATCATAGACAACTGCTGCATGCAGCTGGTGCAGAATCCTTAC  814

Query  787  CAGTTTGATGTGCTTGTGATGCCCAATCTCTATGGGAACATTATTGACAATCTGGCTGCTGGCCTGGTTGGGGG  860
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  CAGTTTGATGTGCTTGTGATGCCCAATCTCTATGGGAACATTATTGACAATCTGGCTGCTGGCCTGGTTGGGGG  888

Query  861  AGCTGGTGTGGTCCCTGGTGAGAGCTATAGTGCAGAATACGCAGTCTTTGAGACGGGTGCCCGGCACCCATTTG  934
            ||||||||||||||||                                      ||||||||||||||||||||
Sbjct  889  AGCTGGTGTGGTCCCT--------------------------------------GGGTGCCCGGCACCCATTTG  924

Query  935  CCCAGGCAGTGGGCAGGAATATAGCCAATCCCACGGCCATGCTGCTGTCGGCTTCCAACATGCTGCGGCATCTT  1008
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  925  CCCAGGCAGTGGGCAGGAATATAGCCAATCCCACGGCCATGCTGCTGTCGGCTTCCAACATGCTGCGGCATCTT  998

Query 1009  AATCTTGAGTATCACTCCAGCATGATCGCAGATGCGGTGAAGAAGGTGATCAAAGTTGGCAAGGTGCGGACTCG  1082
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  999  AATCTTGAGTATCACTCCAGCATGATCGCAGATGCGGTGAAGAAGGTGATCAAAGTTGGCAAGGTGCGGACTCG  1072

Query 1083  AGACATGGGCGGCTACAGCACCACAACCGACTTCATCAAGTCTGTCATCGGTCACCTGCAGACTAAAGGGAGC-  1155
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct 1073  AGACATGGGCGGCTACAGCACCACAACCGACTTCATCAAGTCTGTCATCGGTCACCTGCAGACTAAAGGGAGCT  1146

Query 1156  --------------------------------------------------------------------------  1155
                                                                                      
Sbjct 1147  AGAGCCCTTTATTTCTTCCAACCTTGCAAGGACCACACTCCCCATACCCTTCAGTGCAGTGTACCAGGGAAGAG  1220

Query 1156  --------------------------------------------------------------------------  1155
                                                                                      
Sbjct 1221  ACCTTGTGCCTCTAAGCAGTGGACCATGGTCACCTTGCTGGGTAGAGCCTAGGTTGTCCTTGGGCCGGCTTCCT  1294

Query 1156  --------------------------------------------------------------------------  1155
                                                                                      
Sbjct 1295  TAGGGGACAGACTGTTGGGTGGTGATGGGGATTGTTAGGATGGAGCCCAGGCCACATGGATGATGATGATTCTC  1368

Query 1156  --------------------------------------------------------------------------  1155
                                                                                      
Sbjct 1369  CCCCACAGGTTCGAACCTCTGACATGGGTGGCTATGCTACTTGCCATGACTTCACTGAGGCTGTCATTGCTGCC  1442

Query 1156  --------------------------------------------------------------  1155
                                                                          
Sbjct 1443  TTGCCCCACCCATAGGCCCTGTCCATACCCATGTAAGGTGTTCAATAAAGAACATGAACCAA  1504

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