Nucleotide Global Alignment
Description
- Query:
- TRCN0000469304
- Subject:
- XM_017015310.1
- Aligned Length:
- 5469
- Identities:
- 1368
- Gaps:
- 4095
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCAGTATCCATGGATGTCACTGACCTGGCTTCCCGCCATTATGGCCACCAATTATGTGTGTCTTTCACTGAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCGTCAACCACACCTCTGCCATCAGGTATGCGGAGACCAAAGCCAAGGGGCTGTTTTCCTGCGGGAATTTACAC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGATTCGAAGAGAGAGCCTCCATGAAGATTTCCTGTCTGACCTCTTGAATAGTCACAAAACTGAAGACTCGAGT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TCCAGGACCGCACGCTCCGAGGAGGACCGGGACGGCCTATGGGATGCCTGGGGCCCATGGAGTGAATGCTCACG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CACCTGCGGGGGTGGGGCCTCCTACTCTCTGAGGCGCTGCCTGAGCAGCAAGAGCTGTGAAGGAAGAAATATCC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GATACAGAACATGCAGTAATGTGGACTGCCCACCAGAAGCAGGTGATTTCCGAGCTCAGCAATGCTCAGCTCAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AATGATGTCAAGCACCATGGCCAGTTTTATGAATGGCTTCCTGTGTCTAATGACCCTGACAACCCATGTTCACT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CAAGTGCCAAGCCAAAGGAACAACCCTGGTTGTTGAACTAGCACCTAAGGTCTTAGATGGTACGCGTTGCTATA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CAGAATCTTTGGATATGTGCATCAGTGGTTTATGCCAAATTGTTGGCTGCGATCACCAGCTGGGAAGCACCGTC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AAGGAAGATAACTGTGGGGTCTGCAACGGAGATGGGTCCACCTGCCGGCTGGTCCGAGGGCAGTATAAATCCCA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GCTCTCCGCAACCAAATCGGATGATACTGTGGTTGCAATTCCCTATGGAAGTAGACATATTCGCCTTGTCTTAA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AAGGTCCTGATCACTTATATCTGGAAACCAAAACCCTCCAGGGGACTAAAGGTGAAAACAGTCTCAGCTCCACA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GGAACTTTCCTTGTGGACAATTCTAGTGTGGACTTCCAGAAATTTCCAGACAAAGAGATACTGAGAATGGCTGG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 ACCACTCACAGCAGATTTCATTGTCAAGATTCGTAACTCGGGCTCCGCTGACAGTACAGTCCAGTTCATCTTCT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ATCAACCCATCATCCACCGATGGAGGGAGACGGATTTCTTTCCTTGCTCAGCAACCTGTGGAGGAGGTTATCAG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CTGACATCGGCTGAGTGCTACGATCTGAGGAGCAACCGTGTGGTTGCTGACCAATACTGTCACTATTACCCAGA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GAACATCAAACCCAAACCCAAGCTTCAGGAGTGCAACTTGGATCCTTGTCCAGCCAGTGACGGATACAAGCAGA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TCATGCCTTATGACCTCTACCATCCCCTTCCTCGGTGGGAGGCCACCCCATGGACCGCGTGCTCCTCCTCGTGT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GGGGGGGGCATCCAGAGCCGGGCAGTTTCCTGTGTGGAGGAGGACATCCAGGGGCATGTCACTTCAGTGGAAGA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GTGGAAATGCATGTACACCCCTAAGATGCCCATCGCGCAGCCCTGCAACATTTTTGACTGCCCTAAATGGCTGG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CACAGGAGTGGTCTCCGTGCACAGTGACATGTGGCCAGGGCCTCAGATACCGTGTGGTCCTCTGCATCGACCAT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CGAGGAATGCACACAGGAGGCTGTAGCCCAAAAACAAAGCCCCACATAAAAGAGGAATGCATCGTACCCACTCC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CTGCTATAAACCCAAAGAGAAACTTCCAGTCGAGGCCAAGTTGCCATGGTTCAAACAAGCTCAAGAGCTAGAAG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AAGGAGCTGCTGTGTCAGAGGAGCCCTCGTTCATCCCAGAGGCCTGGTCGGCCTGCACAGTCACCTGTGGTGTG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GGGACCCAGGTGCGAATAGTCAGGTGCCAGGTGCTCCTGTCTTTCTCTCAGTCCGTGGCTGACCTGCCTATTGA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CGAGTGTGAAGGGCCCAAGCCAGCATCCCAGCGTGCCTGTTATGCAGGCCCATGCAGCGGGGAAATTCCTGAGT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TCAACCCAGACGAGACAGATGGGCTCTTTGGTGGCCTGCAGGATTTCGACGAGCTGTATGACTGGGAGTATGAG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GGGTTCACCAAGTGCTCCGAGTCCTGTGGAGGAGGTGTCCAGGAGGCTGTGGTGAGCTGCTTGAACAAACAGAC 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TCGGGAGCCTGCTGAGGAGAACCTGTGCGTGACCAGCCGCCGGCCCCCACAGCTCCTGAAGTCCTGCAATTTGG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 ATCCCTGCCCAGCAAGGTGGGAAATTGGCAAGTGGAGTCCATGTAGTCTCACATGTGGGGTCGGCCTACAGACC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 AGAGACGTCTTCTGCAGCCACCTGCTTTCCAGAGAGATGAATGAAACAGTCATCCTGGCTGATGAGCTGTGTCG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 CCAGCCCAAGCCCAGCACGGTGCAAGCTTGTAACCGCTTTAATTGCCCCCCAGCCTGGTACCCTGCACAGTGGC 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 AGCCGTGTTCCAGAACGTGTGGCGGGGGTGTTCAGAAACGTGAGGTTCTTTGCAAGCAGCGCATGGCTGATGGC 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 AGCTTCCTGGAGCTTCCTGAGACCTTCTGTTCAGCTTCAAAACCTGCCTGCCAGCAAGCATGCAAGAAAGATGA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 CTGTCCCAGCGAGTGGCTTCTCTCAGACTGGACAGAGTGTTCCACAAGCTGCGGGGAAGGCACCCAGACTCGAA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 GCGCCATTTGCCGAAAGATGCTGAAAACCGGCCTCTCAACGGTTGTCAATTCCACCCTGTGCCCGCCCCTGCCT 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 TTCTCTTCCTCCATCAGGCCCTGTATGCTGGCAACCTGTGCAAGGCCCGGGCGGCCATCCACGAAGCACAGCCC 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 GCACATCGCGGCCGCCAGGAAGGTCTACATACAGACTCGCAGGCAGAGGAAGCTGCACTTCGTGGTGGGGGGCT 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 TCGCCTACCTGCTCCCCAAGACGGCGGTGGTGCTGCGCTGCCCGGCGCGCAGGGTCCGCAAGCCCCTCATCACC 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 TGGGAGAAGGACGGCCAGCACCTCATCAGCTCGACGCACGTCACGGTGGCCCCCTTCGGCTATCTCAAGATCCA 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 CCGCCTCAAGCCCTCGGATGCAGGCGTCTACACCTGCTCAGCGGGCCCGGCCCGGGAGCACTTTGTGATTAAGC 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 TCATCGGAGGCAACCGCAAGCTCGTGGCCCGGCCCTTGAGCCCGAGAAGTGAGGAAGAGGTGCTTGCGGGGAGG 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 AAGGGCGGCCCGAAGGAGGCCCTGCAGACCCACAAACACCAGAACGGGATCTTCTCCAACGGCAGCAAGGCGGA 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 GAAGCGGGGCCTGGCCGCCAACCCGGGGAGCCGCTACGACGACCTCGTCTCCCGGCTGCTGGAGCAGGGCGGCT 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 GGCCCGGAGAGCTGCTGGCCTCGTGGGAGGCGCAGGACTCTGCGGAAAGGAACACGACCTCGGAGGAGGACCCG 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 GGTGCAGAGCAAGTGCTCCTGCACCTGCCCTTCACCATGGTGACCGAGCAGCGGCGCCTGGACGACATCCTGGG 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 GAACCTCTCCCAGCAGCCCGAGGAGCTGCGCGACCTCTACAGCAAGCACCTGGTGGCCCAGCTGGCCCAGGAGA 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 TCTTCCGCAGCCACCTGGAGCACCAGGACACGCTCCTGAAGCCCTCGGAGCGCAGGACTTCCCCAGTGACTCTC 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 TCGCCTCATAAACACGTGTCTGGCTTCAGCAGCTCCCTGCGGACCTCCTCCACCGGGGACGCCGGGGGAGGCTC 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 TCGAAGGCCACACCGCAAGCCCACCATCCTGCGCAAGATCTCAGCGGCCCAGCAGCTCTCAGCCTCGGAGGTGG 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 TCACCCACCTGGGGCAGACGGTGGCCCTGGCCAGCGGGACACTGAGTGTTCTTCTGCACTGTGAGGCCATCGGC 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 CACCCAAGGCCTACCATCAGCTGGGCCAGGAATGGAGAAGAAGTTCAGTTCAGTGACAGGATTCTTCTACAGCC 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 AGATGATTCCTTACAGATCTTGGCACCAGTGGAAGCAGATGTGGGTTTCTACACTTGCAATGCCACCAATGCCT 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 TGGGATACGACTCTGTCTCCATTGCCGTCACATTAGCAGGAAAGCCACTAGTGAAAACGTCACGAATGACAGTG 3996
Query 1 -------------------------------------------------------------------ATGTG-- 5
|||||
Sbjct 3997 ATCAACACGGAGAAGCCTGCAGTCACAGTCGATATAGGAAGCACCATCAAAACAGTGCAGGGAGTGAATGTGAC 4070
Query 6 -TTTGACTG--ATGAGTGGGGTTTTTTGTTTTTTTTTTTCTTCCTAGGAGTGCCTGAAGCTGAAGTCACTTGGT 76
.|..|||| | |||| ..|||||||||||||||||||||||||||||
Sbjct 4071 AATCAACTGCCA-------GGTT--------------------GCAGGAGTGCCTGAAGCTGAAGTCACTTGGT 4117
Query 77 TCAGGAATAAAAGCAAACTGGGCTCCCCGCACCATCTGCACGAAGGCTCCTTGCTGCTCACAAACGTGTCCTCC 150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4118 TCAGGAATAAAAGCAAACTGGGCTCCCCGCACCATCTGCACGAAGGCTCCTTGCTGCTCACAAACGTGTCCTCC 4191
Query 151 TCGGATCAGGGCCTGTACTCCTGCAGGGCGGCCAATCTTCATGGAGAGCTGACTGAGAGCACCCAGCTGCTGAT 224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4192 TCGGATCAGGGCCTGTACTCCTGCAGGGCGGCCAATCTTCATGGAGAGCTGACTGAGAGCACCCAGCTGCTGAT 4265
Query 225 CCTAGATCCCCCCCAAGTCCCCACACAGTTGGAAGACATCAGGGCCTTGCTCGCTGCCACTGGACCGAACCTTC 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4266 CCTAGATCCCCCCCAAGTCCCCACACAGTTGGAAGACATCAGGGCCTTGCTCGCTGCCACTGGACCGAACCTTC 4339
Query 299 CTTCAGTGCTGACGTCTCCTCTGGGAACACAGCTGGTCCTGGATCCTGGGAATTCTGCTCTCCTTGGCTGCCCC 372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4340 CTTCAGTGCTGACGTCTCCTCTGGGAACACAGCTGGTCCTGGATCCTGGGAATTCTGCTCTCCTTGGCTGCCCC 4413
Query 373 ATCAAAGGTCACCCTGTCCCTAATATCACCTGGTTTCATGGTGGTCAGCCAATTGTCACTGCCACAGGACTGAC 446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4414 ATCAAAGGTCACCCTGTCCCTAATATCACCTGGTTTCATGGTGGTCAGCCAATTGTCACTGCCACAGGACTGAC 4487
Query 447 GCATCACATCTTGGCAGCTGGACAGATCCTTCAAGTTGCAAACCTTAGCGGTGGGTCTCAAGGGGAATTCAGCT 520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4488 GCATCACATCTTGGCAGCTGGACAGATCCTTCAAGTTGCAAACCTTAGCGGTGGGTCTCAAGGGGAATTCAGCT 4561
Query 521 GCCTTGCCCAGAATGAGGCAGGGGTGCTCATGCAGAAGGCATCTTTAGTGATCCAAGATTACTGGTGGTCTGTG 594
|||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4562 GCCTTGCTCAGAATGAGGCAGGGGTGCTCATGCAGAAGGCATCTTTAGTGATCCAAGATTACTGGTGGTCTGTG 4635
Query 595 GACAGACTGGCAACCTGCTCAGCCTCCTGTGGTAACCGGGGGGTTCAGCAGCCCCGCTTGAGGTGCCTGCTGAA 668
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4636 GACAGACTGGCAACCTGCTCAGCCTCCTGTGGTAACCGGGGGGTTCAGCAGCCCCGCTTGAGGTGCCTGCTGAA 4709
Query 669 CAGCACGGAGGTCAACCCTGCCCACTGCGCAGGGAAGGTTCGCCCTGCGGTGCAGCCCATCGCGTGCAACCGGA 742
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4710 CAGCACGGAGGTCAACCCTGCCCACTGCGCAGGGAAGGTTCGCCCTGCGGTGCAGCCCATCGCGTGCAACCGGA 4783
Query 743 GAGACTGCCCTTCTCGGTGGATGGTGACCTCCTGGTCTGCCTGTACCCGGAGCTGTGGGGGAGGTGTCCAGACC 816
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4784 GAGACTGCCCTTCTCGGTGGATGGTGACCTCCTGGTCTGCCTGTACCCGGAGCTGTGGGGGAGGTGTCCAGACC 4857
Query 817 CGCAGGGTGACCTGTCAAAAGCTGAAAGCCTCTGGGATCTCCACCCCTGTGTCCAATGACATGTGCACCCAGGT 890
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4858 CGCAGGGTGACCTGTCAAAAGCTGAAAGCCTCTGGGATCTCCACCCCTGTGTCCAATGACATGTGCACCCAGGT 4931
Query 891 CGCCAAGCGGCCTGTGGACACCCAGGCCTGTAACCAGCAGCTGTGTGTGGAGTGGGCCTTCTCCAGCTGGGGCC 964
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4932 CGCCAAGCGGCCTGTGGACACCCAGGCCTGTAACCAGCAGCTGTGTGTGGAGTGGGCCTTCTCCAGCTGGGGCC 5005
Query 965 AGTGCAATGGGCCTTGCATCGGGCCTCACCTAGCTGTGCAACACAGACAAGTCTTCTGCCAGACACGGGATGGC 1038
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5006 AGTGCAATGGGCCTTGCATCGGGCCTCACCTAGCTGTGCAACACAGACAAGTCTTCTGCCAGACACGGGATGGC 5079
Query 1039 ATCACCTTACCATCAGAGCAGTGCAGTGCTCTTCCGAGGCCTGTGAGCACCCAGAACTGCTGGTCAGAGGCCTG 1112
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5080 ATCACCTTACCATCAGAGCAGTGCAGTGCTCTTCCGAGGCCTGTGAGCACCCAGAACTGCTGGTCAGAGGCCTG 5153
Query 1113 CAGTGTACACTGGAGAGTCAGCCTGTGGACCCTGTGCACAGCTACCTGTGGCAACTACGGCTTCCAGTCCCGGC 1186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5154 CAGTGTACACTGGAGAGTCAGCCTGTGGACCCTGTGCACAGCTACCTGTGGCAACTACGGCTTCCAGTCCCGGC 5227
Query 1187 GTGTGGAGTGTGTGCATGCCCGCACCAACAAGGCAGTGCCTGAGCACCTGTGCTCCTGGGGGCCCCGGCCTGCC 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5228 GTGTGGAGTGTGTGCATGCCCGCACCAACAAGGCAGTGCCTGAGCACCTGTGCTCCTGGGGGCCCCGGCCTGCC 5301
Query 1261 AACTGGCAGCGCTGCAACATCACCCCATGTGAAAACATGGAGTGCAGAGACACCACCAGGTACTGCGAGAAGGT 1334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5302 AACTGGCAGCGCTGCAACATCACCCCATGTGAAAACATGGAGTGCAGAGACACCACCAGGTACTGCGAGAAGGT 5375
Query 1335 GAAACAGCTGAAACTCTGCCAACTCAGCCAGTTTAAATCTCGCTGCTGTGGAACTTGTGGCAAAGCG 1401
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5376 GAAACAGCTGAAACTCTGCCAACTCAGCCAGTTTAAATCTCGCTGCTGTGGAACTTGTGGCAAAGCG 5442
