Nucleotide Global Alignment
Description
- Query:
- TRCN0000469306
- Subject:
- NR_045579.2
- Aligned Length:
- 4385
- Identities:
- 2180
- Gaps:
- 2196
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGAAATAGCACACAACCACTGTGAGCTGTATGCGATTCAGAAACCAAGACCAAATTTTGCTCACTTTCATTAAT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CAGTTGCTCAGATAGAAGGAAATGACATCTGGTTCTGTCTTCTTCTACATCTTAATTTTTGGAAAATATTTACT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCCTCCTGAAGAATGAACTTTCAAACTTTTTTATTAACACTCCATCTCCCACCTAGAATCAAATAGTATTACAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CAGCTGGTACTGCCTCTTCCTTCGACACAGAAGAAAACCTAAAATCCAGTAAGACAGAGTGGCATGCCAAATTT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCCCATCAATTTATTGGCACATTCAAGAATAAAGCAAAACTCTACTGAATATCGATATAGTAGTATCTGCCTCT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GAGGATTCTTGGTGCATATTTTTGCATTCTGCCATGTTTCGTCCATTTTGCCCCTACCTTGGGCATTTAAATAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AAAGATTCCCATGAGATCGGATCAATTCAGCTGTTTATTTCTAGAAATGTCTATAAAGAGAAGAACTAACAAGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GAACCATCTTTTTATTTTTTTAATTTACTTCCTAAATATAAATGAAGGAGAATCTAGAACCACTGTCTTCATTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GAAATCATTGTTCCAAATGAACCGCAAGTCTGAGTTTATAAAGCTGCCATCTCCAATATGTCTGTTGAGAAATA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TGTCTATTTACATACATCATGTTTGTTTCTGACCTTGTGGGACAATAACTTGGAATGCCCTGAGCAACAAAAAC 740
Query 1 -------------ATGA-----CATCTGGTTCTGTCTTCTTCTACATCTTA---ATTT---------------- 37
|||| |||||..|.|| |.|| ||.| ||||
Sbjct 741 ATAAAACACTCTGATGAGACAGCATCTCATCCT---------TGCA-CTGAAGGATTTCAAAAGAGGGACAGAT 804
Query 38 --------TTGGAAA-----ATA----TTTTTCTCATGGGGGTGGACAGGATGTCAAGTGCTCCCTTGGCTATT 94
.||||.| ||| ..|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 805 CACCCAGAATGGACATGGTCATAGAGGAATTTCTCATGGGGGTGGACAGGATGTCAAGTGCTCCCTTGGCTATT 878
Query 95 TCCCCTGTGGGAACATCACAAAGTGCTTGCCTCAGCTCCTGCACTGTAACGGTGTGGACGACTGCGGGAATCAG 168
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 879 TCCCCTGTGGGAACATCACAAAGTGCTTGCCTCAGCTCCTGCACTGTAACGGTGTGGACGACTGCGGGAATCAG 952
Query 169 GCCGATGAGGACAACTGTGGAGACAACAATGGATGGTCTCTGCAATTTGACAAATATTTTGCCAGTTACTACAA 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 953 GCCGATGAGGACAACTGTGGAGACAACAATGGATGGTCTCTGCAATTTGACAAATATTTTGCCAGTTACTACAA 1026
Query 243 AATGACTTCCCAATATCCTTTTGAGGCAGAAACACCTGAATGTTTGGTCGGTTCTGTGCCAGTGCAATGTCTTT 316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1027 AATGACTTCCCAATATCCTTTTGAGGCAGAAACACCTGAATGTTTGGTCGGTTCTGTGCCAGTGCAATGTCTTT 1100
Query 317 GCCAAGGTCTGGAGCTTGACTGTGATGAAACCAATTTACGAGCTGTTCCATCGGTTTCTTCAAATGTGACTGCA 390
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1101 GCCAAGGTCTGGAGCTTGACTGTGATGAAACCAATTTACGAGCTGTTCCATCGGTTTCTTCAAATGTGACTGCA 1174
Query 391 ATGTCACTTCAGTGGAACTTAATAAGAAAGCTTCCTCCTGATTGCTTCAAGAATTATCATGATCTTCAGAAGCT 464
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1175 ATGTCACTTCAGTGGAACTTAATAAGAAAGCTTCCTCCTGATTGCTTCAAGAATTATCATGATCTTCAGAAGCT 1248
Query 465 GTACCTGCAAAACAATAAGATTACATCCATCTCCATCTATGCTTTCAGAGGACTGAATAGCCTTACTAAACTGT 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1249 GTACCTGCAAAACAATAAGATTACATCCATCTCCATCTATGCTTTCAGAGGACTGAATAGCCTTACTAAACTGT 1322
Query 539 ATCTCAGTCATAACAGAATAACCTTCCTGAAGCCGGGTGTTTTTGAAGATCTTCACAGACTAGAATGGCTGATA 612
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1323 ATCTCAGTCATAACAGAATAACCTTCCTGAAGCCGGGTGTTTTTGAAGATCTTCACAGACTAGAATGGCTGATA 1396
Query 613 ATTGAAGATAATCACCTCAGTCGAATTTCCCCACCAACATTTTATGGACTAAATTCTCTTATTCTCTTAGTCCT 686
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1397 ATTGAAGATAATCACCTCAGTCGAATTTCCCCACCAACATTTTATGGACTAAATTCTCTTATTCTCTTAGTCCT 1470
Query 687 GATGAATAACGTCCTCACCCGTTTACCTGATAAACCTCTCTGTCAACACATGCCAAGACTACATTGGCTGGACC 760
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1471 GATGAATAACGTCCTCACCCGTTTACCTGATAAACCTCTCTGTCAACACATGCCAAGACTACATTGGC------ 1538
Query 761 TTGAAGGCAACCATATCCATAATTTAAGAAATTTGACTTTTATTTCCTGCAGTAATTTAACTGTTTTAGTGATG 834
||||||||
Sbjct 1539 ------------------------------------------------------------------TAGTGATG 1546
Query 835 AGGAAAAACAAAATTAATCACTTAAATGAAAATACTTTTGCACCTCTCCAGAAACTGGATGAATTGGATTTAGG 908
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1547 AGGAAAAACAAAATTAATCACTTAAATGAAAATACTTTTGCACCTCTCCAGAAACTGGATGAATTGGATTTAGG 1620
Query 909 AAGTAATAAGATTGAAAATCTTCCACCGCTTATATTCAAGGACCTGAAGGAGCTGTCACAATTGAATCTTTCCT 982
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1621 AAGTAATAAGATTGAAAATCTTCCACCGCTTATATTCAAGGACCTGAAGGAGCTGTCACAATTGAATCTTTCCT 1694
Query 983 ATAATCCAATCCAGAAAATTCAAGCAAACCAATTTGATTATCTTGTCAAACTCAAGTCTCTCAGCCTAGAAGGG 1056
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1695 ATAATCCAATCCAGAAAATTCAAGCAAACCAATTTGATTATCTTGTCAAACTCAAGTCTCTCAGCCTAGAAGGG 1768
Query 1057 ATTGAAATTTCAAATATCCAACAAAGGATGTTTAGACCTCTTATGAATCTCTCTCACATATATTTTAAGAAATT 1130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1769 ATTGAAATTTCAAATATCCAACAAAGGATGTTTAGACCTCTTATGAATCTCTCTCACATATATTTTAAGAAATT 1842
Query 1131 CCAGTACTGTGGGTATGCACCACATGTTCGCAGCTGTAAACCAAACACTGATGGAATTTCATCTCTAGAGAATC 1204
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1843 CCAGTACTGTGGGTATGCACCACATGTTCGCAGCTGTAAACCAAACACTGATGGAATTTCATCTCTAGAGAATC 1916
Query 1205 TCTTGGCAAGCATTATTCAGAGAGTATTTGTCTGGGTTGTATCTGCAGTTACCTGCTTTGGAAACATTTTTGTC 1278
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1917 TCTTGGCAAGCATTATTCAGAGAGTATTTGTCTGGGTTGTATCTGCAGTTACCTGCTTTGGAAACATTTTTGTC 1990
Query 1279 ATTTGCATGCGACCTTATATCAGGTCTGAGAACAAGCTGTATGCCATGTCAATCATTTCTCTCTGCTGTGCCGA 1352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1991 ATTTGCATGCGACCTTATATCAGGTCTGAGAACAAGCTGTATGCCATGTCAATCATTTCTCTCTGCTGTGCCGA 2064
Query 1353 CTGCTTAATGGGAATATATTTATTCGTGATCGGAGGCTTTGACCTAAAGTTTCGTGGAGAATACAATAAGCATG 1426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2065 CTGCTTAATGGGAATATATTTATTCGTGATCGGAGGCTTTGACCTAAAGTTTCGTGGAGAATACAATAAGCATG 2138
Query 1427 CGCAGCTGTGGATGGAGAGTACTCATTGTCAGCTTGTAGGATCTTTGGCCATTCTGTCCACAGAAGTATCAGTT 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2139 CGCAGCTGTGGATGGAGAGTACTCATTGTCAGCTTGTAGGATCTTTGGCCATTCTGTCCACAGAAGTATCAGTT 2212
Query 1501 TTACTGTTAACATTTCTGACATTGGAAAAATACATCTGCATTGTCTATCCTTTTAGATGTGTGAGACCTGGAAA 1574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2213 TTACTGTTAACATTTCTGACATTGGAAAAATACATCTGCATTGTCTATCCTTTTAGATGTGTGAGACCTGGAAA 2286
Query 1575 ATGCAGAACAATTACAGTTCTGATTCTCATTTGGATTACTGGTTTTATAGTGGCTTTCATTCCATTGAGCAATA 1648
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2287 ATGCAGAACAATTACAGTTCTGATTCTCATTTGGATTACTGGTTTTATAGTGGCTTTCATTCCATTGAGCAATA 2360
Query 1649 AGGAATTTTTCAAAAACTACTATGGCACCAATGGAGTATGCTTCCCTCTTCATTCAGAAGATACAGAAAGTATT 1722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2361 AGGAATTTTTCAAAAACTACTATGGCACCAATGGAGTATGCTTCCCTCTTCATTCAGAAGATACAGAAAGTATT 2434
Query 1723 GGAGCCCAGATTTATTCAGTGGCAATTTTTCTTGGTATTAATTTGGCCGCATTTATCATCATAGTTTTTTCCTA 1796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2435 GGAGCCCAGATTTATTCAGTGGCAATTTTTCTTGGTATTAATTTGGCCGCATTTATCATCATAGTTTTTTCCTA 2508
Query 1797 TGGAAGCATGTTTTATAGTGTTCATCAAAGTGCCATAACAGCAACTGAAATACGGAATCAAGTTAAAAAAGAGA 1870
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2509 TGGAAGCATGTTTTATAGTGTTCATCAAAGTGCCATAACAGCAACTGAAATACGGAATCAAGTTAAAAAAGAGA 2582
Query 1871 TGATCCTTGCCAAACGTTTTTTCTTTATAGTATTTACTGATGCATTATGCTGGATACCCATTTTTGTAGTGAAA 1944
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2583 TGATCCTTGCCAAACGTTTTTTCTTTATAGTATTTACTGATGCATTATGCTGGATACCCATTTTTGTAGTGAAA 2656
Query 1945 TTTCTTTCACTGCTTCAGGTAGAAATACCAGGTACCATAACCTCTTGGGTAGTGATTTTTATTCTGCCCATTAA 2018
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2657 TTTCTTTCACTGCTTCAGGTAGAAATACCAGGTACCATAACCTCTTGGGTAGTGATTTTTATTCTGCCCATTAA 2730
Query 2019 CAGTGCTTTGAACCCAATTCTCTATACTCTGACCACAAGACCATTTAAAGAAATGATTCATCGGTTTTGGTATA 2092
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2731 CAGTGCTTTGAACCCAATTCTCTATACTCTGACCACAAGACCATTTAAAGAAATGATTCATCGGTTTTGGTATA 2804
Query 2093 ACTACAGACAAAGAAAATCTATGGACAGCAAAGGTCAGAAAACATATGCTCCATCATTCATCTGGGTGGAAATG 2166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2805 ACTACAGACAAAGAAAATCTATGGACAGCAAAGGTCAGAAAACATATGCTCCATCATTCATCTGGGTGGAAATG 2878
Query 2167 TGGCCACTGCAGGAGATGCCACCTGAGTTAATGAAGCCGGACCTTTTCACATACCCCTGTGAAATGTCACTGAT 2240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2879 TGGCCACTGCAGGAGATGCCACCTGAGTTAATGAAGCCGGACCTTTTCACATACCCCTGTGAAATGTCACTGAT 2952
Query 2241 TTCTCAATCAACGAGACTCAATTCCTATTCA------------------------------------------- 2271
|||||||||||||||||||||||||||||||
Sbjct 2953 TTCTCAATCAACGAGACTCAATTCCTATTCATGACTGACTCTGAAATTCATTTCTTCGCAGAGAATACTGTGGG 3026
Query 2272 -------------------------------------------------------------------------- 2271
Sbjct 3027 GGTGCTTCATGAGGGATTTACTGGTATGAAATGAATACCACAAAATTAATTTATAATAATAGCTAAGATAAATA 3100
Query 2272 -------------------------------------------------------------------------- 2271
Sbjct 3101 TTTTACAAGGACATGAGGAAAAATAAAAATGACTAATGCTCTTACAAAGGGAAGTAATTATATCAATAATGTAT 3174
Query 2272 -------------------------------------------------------------------------- 2271
Sbjct 3175 ATATATTAGTAGACATTTTGCATAAGAAATTAAGAGAAATCTACTTCAGTAACATTCATTCATTTTTCTAACAT 3248
Query 2272 -------------------------------------------------------------------------- 2271
Sbjct 3249 GCATTTATTGAGTACCCACTACTATGTGCATAGCATTGCAATATAGTCCTGGAAGTAGACAGTGCAGAACCTTT 3322
Query 2272 -------------------------------------------------------------------------- 2271
Sbjct 3323 CAATCTGTAGATGGTGTTTAATGACAAAAGACTATACAAAGTCCATCTGCAGTTCCTAGTTTAAAGTAGAGCTT 3396
Query 2272 -------------------------------------------------------------------------- 2271
Sbjct 3397 TACCTGTCATGTGCATCAGCAAGAATCATAGGCACTTTTAAATAAAGGTTTAAAGTTTTGGAATACTCAGTGTA 3470
Query 2272 -------------------------------------------------------------------------- 2271
Sbjct 3471 TTTGCATCATAGAAAATGTCTGACTGTTTGCAAAATAATATTCTGTTTTAAGAATCCATCTTACCTCTCTTTAA 3544
Query 2272 -------------------------------------------------------------------------- 2271
Sbjct 3545 GTTTCCATACACTTGAGAGCCAACACAACATATTTATTACTAAAAAGATGCTTTGCTAGAAACTCAAAAACAGC 3618
Query 2272 -------------------------------------------------------------------------- 2271
Sbjct 3619 ACTTCTTTTGGCACTTCCTGCCCAGTTTTCTCTTTGCTTTAAATGAACATCATCATATGGAATTGGAATAGGAG 3692
Query 2272 -------------------------------------------------------------------------- 2271
Sbjct 3693 AGTATGAGTACGGCAGAGAAGTGGATCAGAAAAACTAGAATGAGGATAAACATTTACATTAGTGGAAACTCCTG 3766
Query 2272 -------------------------------------------------------------------------- 2271
Sbjct 3767 AAATAAATCCTTGTATTGTCAGTTAACTGATTTTCAACAAGGATGCCAAGACAAAAAGGCTTTTCAACAAACCG 3840
Query 2272 -------------------------------------------------------------------------- 2271
Sbjct 3841 TGCTGTTTTAAGAACAGACCTAAGTGGTTTAATTCACCCACTTTAGATGGGTGAATGTTATGGTGTGTGAAATA 3914
Query 2272 -------------------------------------------------------------------------- 2271
Sbjct 3915 TCTCAGTAAAGCAGTTAAAAGGAAAAAGAGCTGGAATGCACTGATTCAGGAACTTAATTTCAGGAAGGAAAGGT 3988
Query 2272 -------------------------------------------------------------------------- 2271
Sbjct 3989 CTGTATGTACACATTTCACTTTAAGCAGAAAATCTTTCTTCAAGAAATGACTTTACTTTCTCTTTGCACTGCCA 4062
Query 2272 -------------------------------------------------------------------------- 2271
Sbjct 4063 GCACGTGAGATACTAACTTTTTAACTAGTTGTTCTTCTCTAGTCTCTACGTTATTAGAATTTTTTGCTTTCATA 4136
Query 2272 -------------------------------------------------------------------------- 2271
Sbjct 4137 ATGTGAAACCTTTAAGCAGGAGAAGAAAATGTTTTCAGATAGTTTCAAATACACCAAAAATGTTTGAAACACAA 4210
Query 2272 -------------------------------------------------------------------------- 2271
Sbjct 4211 AAATACTGGAATCAAACCATAATGCACTTATTGAATATATAGTTGTATAGATTTGTTCTGAAAATAAATTATCT 4284
Query 2272 ------------------- 2271
Sbjct 4285 GAAATTTAACTATTAAAAA 4303
