Nucleotide Global Alignment

Description

Query:
TRCN0000469342
Subject:
XM_006515812.2
Aligned Length:
1325
Identities:
1012
Gaps:
141

Alignment

Query    1  ATGCCTCGTGTAAAAGCAGCTCAAGCTGGAAGACAGAGCTCTGCAAAGAGACATCTTGCAGAACAATTTGCAGT  74
            |||||.|||||||||||||||||.||||||||||...|..||||.|||||.|..||.|||||.||.|||||.|.
Sbjct    1  ATGCCCCGTGTAAAAGCAGCTCAGGCTGGAAGACCCGGACCTGCGAAGAGGCGCCTCGCAGAGCAGTTTGCCGC  74

Query   75  TGGAGAGATAATAACTGACATGGCAAAAAAGGAATGGAAAGTAGGATTACCCATTGGCCAAGGAGGCTTTGGCT  148
            |||||||.|..||||.||||||.|.|..|||||.||||||.|||||||.||||||||||||||.||||||||||
Sbjct   75  TGGAGAGGTCCTAACCGACATGTCTAGGAAGGAGTGGAAACTAGGATTGCCCATTGGCCAAGGTGGCTTTGGCT  148

Query  149  GTATATATCTTGCTGATATGAATTCTTCAGAGTCAGTTGGCAGTGATGCACCTTGTGTTGTAAAAGTGGAACCC  222
            |.||.|||||.||.||.|..||||||||..|..|.|||||||||||.||.||.||||||||.||||||||||||
Sbjct  149  GCATCTATCTGGCGGACACAAATTCTTCCAAACCGGTTGGCAGTGACGCGCCCTGTGTTGTGAAAGTGGAACCC  222

Query  223  AGTGACAATGGACCTCTTTTTACTGAATTAAAGTTCTACCAACGAGCTGCAAAACCAGAGCAAATTCAGAAATG  296
            ||||||||||||||||||||.||.|||||||||||||||||..|.|||||.|||||||||||||||||||||||
Sbjct  223  AGTGACAATGGACCTCTTTTCACGGAATTAAAGTTCTACCAGAGGGCTGCTAAACCAGAGCAAATTCAGAAATG  296

Query  297  GATTCGTACCCGTAAGCTGAAGTACCTGGGTGTTCCTAAGTATTGGGGGTCTGGTCTACATGACAAAAATGGAA  370
            |||||||||.|.|||..||||||||||.||||||||||||||||||||.||||||||||||||.||||||||||
Sbjct  297  GATTCGTACACATAAATTGAAGTACCTTGGTGTTCCTAAGTATTGGGGATCTGGTCTACATGATAAAAATGGAA  370

Query  371  AAAGTTACAGGTTTATGATAATGGATCGCTTTGGGAGTGACCTTCAGAAAATATATGAAGCAAATGCCAAAAGG  444
            |||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  AAAGTTACAGGTTTATGATAATGGACCGCTTTGGGAGTGACCTTCAGAAAATATATGAAGCAAATGCCAAAAGG  444

Query  445  TTTTCTCGGAAAACTGTCTTGCAGCTAAGCTTAAGAATTCTGGATATTCTGGAATATATTCACGAGCATGAGTA  518
            |||||||||||||||||.|||||||||||||||||||||||||||||.|||||.||.||.||.|||||||||||
Sbjct  445  TTTTCTCGGAAAACTGTATTGCAGCTAAGCTTAAGAATTCTGGATATCCTGGAGTACATCCATGAGCATGAGTA  518

Query  519  TGTGCATGGAGATATCAAGGCCTCAAATCTTCTTCTGAACTACAAGAATCCTGACCAGGTGTACTTGGTAGATT  592
            .|||||.||.||.|||||||||||.||.||.||.||||...|||||||.|||||||||||.||.||||||||.|
Sbjct  519  CGTGCACGGGGACATCAAGGCCTCCAACCTGCTCCTGAGTCACAAGAACCCTGACCAGGTATATTTGGTAGACT  592

Query  593  ATGGCCTTGCTTATCGGTACTGCCCAGAAAGGAGTTCATAAAGAATACAAAGAAGACCCCAAAAGATGTCACGA  666
            ||||||||||||||||||||||||||| |.||||||||||||||.|||||.|||||.||||||||.||.||.||
Sbjct  593  ATGGCCTTGCTTATCGGTACTGCCCAG-ATGGAGTTCATAAAGAGTACAAGGAAGATCCCAAAAGGTGCCATGA  665

Query  667  TGGCACTATTGAATTCACGAGCATCGATGCACACAATGGCGTGGCCCCATCAAGACGTGGTGATTTGGAAATAC  740
            .|||||..|.||.|||||.||||||||.||.|||||.|||||||||||||||||||||||||||||||||||||
Sbjct  666  CGGCACCCTGGAGTTCACCAGCATCGACGCTCACAAAGGCGTGGCCCCATCAAGACGTGGTGATTTGGAAATAC  739

Query  741  TTGGTTATTGCATGATCCAATGGCTTACTGGCCATCTTCCTTGGGAGGATAATTTGAAAGATCCTAAATATGTT  814
            |||||||||||||||||||.|||||.|..|||..||||||||||||.|||||.||||||||||||||.||.|||
Sbjct  740  TTGGTTATTGCATGATCCAGTGGCTCAGCGGCTGTCTTCCTTGGGAAGATAACTTGAAAGATCCTAACTACGTT  813

Query  815  AGAGATTCCAAAATTAGATACAGAGAAAATATTGCAAGTTTGATGGACAAATGTTTTCCTGAGAAAAACAAACC  888
            ||.|||||||||||||||||||||||.||..|.|||..|||||||||.|||||.||||||||||||||.||.||
Sbjct  814  AGGGATTCCAAAATTAGATACAGAGACAACGTCGCAGCTTTGATGGAGAAATGCTTTCCTGAGAAAAATAAGCC  887

Query  889  AGGTGAAATTGCCAAATACATGGAAACAGTGAAATTACTAGACTACACTGAAAAACCTCTTTATGAAAATTTAC  962
            ||||||.||.||.||.||||||||..|.||||||.||||.||.|||||.|||||||||||.|||.||||..|||
Sbjct  888  AGGTGAGATCGCTAAGTACATGGAGTCTGTGAAACTACTGGAATACACCGAAAAACCTCTCTATCAAAACCTAC  961

Query  963  GTGACATTCTTTTGCAAGGACTAAAAGCTATAGGAAGTAAGGATGATGGCAAATTGGACCTCAGTGTTGTGGAG  1036
            ||||.||.|||||.||||||||||||||||||||||||||.||.||.||||||.||||..|.||||.|||||||
Sbjct  962  GTGATATCCTTTTACAAGGACTAAAAGCTATAGGAAGTAAAGACGACGGCAAACTGGATTTTAGTGCTGTGGAG  1035

Query 1037  AATGGAGGTTTGAAAGCAAAAACAATAACAAAGAAGCGAAAGAAAGAAATTGAAGAAAGCAAGGAACCT----G  1106
            ||.|||.||.||||..|||.|.||....||||||||||.|||||||||...|||||||||..||    |    |
Sbjct 1036  AACGGAAGTGTGAAGACAAGACCAGCCTCAAAGAAGCGGAAGAAAGAAGCAGAAGAAAGCGCGG----TGTGCG  1105

Query 1107  GTGTTGAAGATACGGAATGGTCAAACACACAG--------------ACAGA----------GGAG---------  1147
            .|||.||.||.|.|||.||.|||.||||||||              |||||          ||||         
Sbjct 1106  CTGTGGAGGACATGGAGTGCTCAGACACACAGGTGCAAGAGGCCGCACAGACCCGAAGTGTGGAGTCCCAAGGA  1179

Query 1148  GCCATAC-------------------------------------------------------------------  1154
            ||.||||                                                                   
Sbjct 1180  GCAATACATGGAAGCATGTCTCAGCCAGCGGCGGGCTGCAGCAGCTCTGACAGTTCCAGGAGGCAGCAGCATTT  1253

Query 1155  ---------------------------AGACC-----CGTTCAAGAACCAGAAAGAGAGTCCAGAAG  1189
                                       |||||     .|||||.||||||||||||.||.|||||||
Sbjct 1254  GGGATTGGAACAAGACATGCTAAGGCTAGACCGTAGGGGTTCACGAACCAGAAAGAAAGCCCAGAAG  1320

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