Nucleotide Global Alignment
Description
- Query:
- TRCN0000469368
- Subject:
- NR_045769.2
- Aligned Length:
- 4393
- Identities:
- 1515
- Gaps:
- 2878
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTCAGTCCGATCTCGCGAGAGAGGACGGAAGCCTGTGGGAGCCCGTGGCCTTTAAAGTGCCGTTCAGCCTTTTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTCCAGGGGTGCTTTGTAAACACGGCTGTGCTCAGGGCTCGCGGGTGACCGAAAGGATCATGAACTAGTGACCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGAAAGGGTACTAGATGGAAACTTGAGAAAGGACTGCTTATTGATAACAGCTAAGGTATTCCTGGAAGCAGAGT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AAATAAAGCTCATGGCCCACCAGCTAGAAAGATTTCCTGAAGAGGTAGTCTGATTGGCTTAACTCGTATTCTTG 296
Query 1 -----------------------------------ATGAAATTCAAGTTACATGTGAATTCTGCCAGGCAATAC 39
|||||||||||||||||||||||||||||||||||||||
Sbjct 297 CCATGAGAAAAAGAATGTGATAAGTTATTCAACTTATGAAATTCAAGTTACATGTGAATTCTGCCAGGCAATAC 370
Query 40 AAGGACCTGTGGAATATGAGTGATGACAAACCCTTTCTATGTACTGCGCCTGGATGTGGCCAGCGTTTTACCAA 113
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AAGGACCTGTGGAATATGAGTGATGACAAACCCTTTCTATGTACTGCGCCTGGATGTGGCCAGCGTTTTACCAA 444
Query 114 CGAGGATCATTTGGCTGTCCATAAACATAAACATGAGATGACACTGAAATTTGGTCCAGCACGTAATGACAGTG 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CGAGGATCATTTGGCTGTCCATAAACATAAACATGAGATGACACTGAAATTTGGTCCAGCACGTAATGACAGTG 518
Query 188 TCATTGTGGCTGATCAGACCCCAACACCAACAAGATTCTTGAAAAACTGTGAAGAAGTGGGTTTGTTTAATGAG 261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TCATTGTGGCTGATCAGACCCCAACACCAACAAGATTCTTGAAAAACTGTGAAGAAGTGGGTTTGTTTAATGAG 592
Query 262 TTGGCGAGTCCATTTGAGAATGAATTCAAGAAAGCTTCAGAAGATGACATTAAAAAAATGCCTCTAGATTTATC 335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TTGGCGAGTCCATTTGAGAATGAATTCAAGAAAGCTTCAGAAGATGACATTAAAAAAATGCCTCTAGATTTATC 666
Query 336 CCCTCTTGCAACACCTATCATAAGAAGCAAAATTGAGGAGCCTTCTGTTGTAGAAACAACTCACCAGGATAGTC 409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CCCTCTTGCAACACCTATCATAAGAAGCAAAATTGAGGAGCCTTCTGTTGTAGAAACAACTCACCAGGATAGTC 740
Query 410 CTTTACCTCACCCAGAGTCTACTACCAGTGATGAGAAGGAAGTACCATTGGCACAAACTGCACAGCCCACATCA 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CTTTACCTCACCCAGAGTCTACTACCAGTGATGAGAAGGAAGTACCATTGGCACAAACTGCACAGCCCACATCA 814
Query 484 GCTATTGTTCGTCCAGCATCATTACAGGTTCCCAATGTGCTGCTTACAAGTTCTGACTCAAGTGTAATTATTCA 557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GCTATTGTTCGTCCAGCATCATTACAGGTTCCCAATGTGCTGCTTACAAGTTCTGACTCAAGTGTAATTATTCA 888
Query 558 GCAGGCAGTACCTTCACCAACCTCAAGTACTGTAATCACCCAGGCACCATCCTCTAACAGGCCAATTGTCCCTG 631
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GCAGGCAGTACCTTCACCAACCTCAAGTACTGTAATCACCCAGGCACCATCCTCTAACAGGCCAATTGTCCCTG 962
Query 632 TACCAGGCCCATTTCCTCTTCTGTTACATCTTCCTAATGGACAAACCATGCCTGTTGCTATTCCTGCATCAATT 705
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 TACCAGGCCCATTTCCTCTTCTGTTACATCTTCCTAATGGACAAACCATGCCTGTTGCTATTCCTGCATCAATT 1036
Query 706 ACAAGTTCTAATGTGCATGTTCCAGCTGCAGTCCCACTCGTTCGACCAGTCACCATGGTGCCTAGTGTTCCAGG 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 ACAAGTTCTAATGTGCATGTTCCAGCTGCAGTCCCACTCGTTCGACCAGTCACCATGGTGCCTAGTGTTCCAGG 1110
Query 780 AATCCCAGGTCCTTCCTCTCCCCAACCAGTACAGTCAGAAGCAAAAATGAGATTAAAAGCTGCTTTGACCCAGC 853
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 AATCCCAGGTCCTTCCTCTCCCCAACCAGTACAGTCAGAAGCAAAAATGAGATTAAAAGCTGCTTTGACCCAGC 1184
Query 854 AACATCCTCCAGTTACCAATGGTGATACTGTCAAAGGTCATGGTAGCGGATTGGTTAGGACTCAGTCAGAGGAA 927
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 AACATCCTCCAGTTACCAATGGTGATACTGTCAAAGGTCATGGTAGCGGATTGGTTAGGACTCAGTCAGAGGAA 1258
Query 928 TCTCGACCGCAGTCATTACAACAGCCAGCCACATCCACTACAGAAACTCCGGCTTCTCCAGCTCACACAACTCC 1001
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 TCTCGACCGCAGTCATTACAACAGCCAGCCACATCCACTACAGAAACTCCGGCTTCTCCAGCTCACACAACTCC 1332
Query 1002 ACAGACCCAAAGTACAAGTGGTCGTCGGAGAAGAGCAGCTAACGAAGATCCTGATGAAAAAAGGAGAAAGTTTT 1075
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 ACAGACCCAAAGTACAAGTGGTCGTCGGAGAAGAGCAGCTAACGAAGATCCTGATGAAAAAAGGAGAAAGTTTT 1406
Query 1076 TAGAGCGAAATAGAGCAGCAGCTTCAAGATGCCGACAAAAAAGGAAAGTCTGGGTTCAGTCTTTAGAGAAGAAA 1149
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 TAGAGCGAAATAGAGCAGCAGCTTCAAGATGCCGACAAAAAAGGAAAGTCTGGGTTCAGTCTTTAGAGAAGAAA 1480
Query 1150 GCTGAAGACTTGAGTTCATTAAATGGTCAGCTG----------------------------------------- 1182
|||||||||||||||||||||||||||||||||
Sbjct 1481 GCTGAAGACTTGAGTTCATTAAATGGTCAGCTGCAGTGAATATATTGCTCGTGAAAGGTGCCAGATTGACAGCT 1554
Query 1183 ---------------------------------CAGAGTGAAGTCACCCTGCTGAGAAATGAAGTGGCACAGCT 1223
|||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 TTGGAAACTGAAGGACTCTAATTATCCACAGACCAGAGTGAAGTCACCCTGCTGAGAAATGAAGTGGCACAGCT 1628
Query 1224 GAAACAGCTTCTTCTGGCTCATAAAGATTGCCCTGTAACCGCCATGCAGAAGAAATCTGGCTATCATA------ 1291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 GAAACAGCTTCTTCTGGCTCATAAAGATTGCCCTGTAACCGCCATGCAGAAGAAATCTGGCTATCATACAAATA 1702
Query 1292 -------------------------------------------------------------------------- 1291
Sbjct 1703 TTTCTTCAGCTCTATTCCATAAGGCAGTGGGCACCCAGATGTTTCCATATGCATGGTTGTGCCTTCTTTTGACC 1776
Query 1292 ----------------------------------------CTGCTGATAAAGATGATAGTTCAGAAGACATTTC 1325
||||||||||||||||||||||||||||||||||
Sbjct 1777 TATTGCAGGAAAATGAATAATTTTTCTTTTTTCCACCCAGCTGCTGATAAAGATGATAGTTCAGAAGACATTTC 1850
Query 1326 AGTGCCGAGTAGTCCACATACAGAAGCTATACAGCATAGTTCGGTCAGCACATCCAATGGAGTCAGTTCAACCT 1399
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 AGTGCCGAGTAGTCCACATACAGAAGCTATACAGCATAGTTCGGTCAGCACATCCAATGGAGTCAGTTCAACCT 1924
Query 1400 CCAAGGCAGAAGCTGTAGCCACTTCAGTCCTCACCCAGATGGCGGACCAGAGTACAGAGCCTGCTCTTTCACAG 1473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 CCAAGGCAGAAGCTGTAGCCACTTCAGTCCTCACCCAGATGGCGGACCAGAGTACAGAGCCTGCTCTTTCACAG 1998
Query 1474 ATCGTTATGGCTCCTTCCTCCCAGTCACAGCCCTCAGGAAGT-------------------------------- 1515
||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 ATCGTTATGGCTCCTTCCTCCCAGTCACAGCCCTCAGGAAGTTGATTAAAAACCTGCAGTACAACAGTTTTAGA 2072
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 2073 TACTCATTAGTGACTTCAAAGGGAAATCAAGGAAAGACCAGTTTCCATTTATGCGAAATCTGTGGTTGTAAATT 2146
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 2147 TTTTTTTTTTACTTGAAATTAAATTTGGCTCTAAAGTTGGTGTAGCAGCAGTTGATCAGACTGAAAAACGGTTT 2220
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 2221 TTAGTCTCTGGAAAAAGACTGATTTTGCTTTTTTTATAAATATTATTAGATTTATTAATTTTTCTGTGCTCAAT 2294
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 2295 GTGTAAATTGTATTATAATTCATTGTGATTTATTTCACTTTTAATTTGCTGGTGTTTTAATAAATGGGGGTGTT 2368
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 2369 ACTGAATCTTTCTTCCCACTTCCATTTCTTTTGACCACCCCTTAACCCTCAACTGTGACGGTAGTAGTATTATC 2442
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 2443 ATTTATACCAAAGTTTTGCATAGTCCCTGTTGACTTTGTAATGTTAACGGAGTCATAAAAGCACTAGGCAAGAG 2516
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 2517 AAAGATAGAAATTTGCTTTTAATCTTTTTGCCTTTTATTTTGCACATTATGCAAAAGGAAAAACATTAAAGAAC 2590
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 2591 ACTTTTTTTTAAGTGAGTGAAAACATGGTAAAGACATACAGTGCTTTTATGCACATTGTTAAGCTAAATCAAGG 2664
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 2665 TCATTTATAATCATTTTCCTTTTTTATTTAAGATTTTAAGTAAACAAATTTTAGAATTTTCAGCATTTCAAAAA 2738
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 2739 TGATTTTATTTTTCAAGTCTTAAATTCAATATTTTACACCTATGTTTTGAGGCTAAAAATATGAAATTATATAA 2812
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 2813 TGTATGATACAGGGTTATCAAATATCTAATAATTTTTGAAATTAGCTCTTGTTTTTGGTTTTTTTGTTGTTGTT 2886
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 2887 TTTACAGATTTCAGGTTACAAACTGCAAAGTTTATGCATAATTAAGTATGGTATGGTTGCCAGAAAAGCCTAAA 2960
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 2961 ATTACTACTTAGAAAATTTAAGACTGTTTACCCCCATTGTCTTGTACTTGCGAGCTAACTTGTACTATTCTTGT 3034
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 3035 GAAAGCACTGTCATCTTTTAGTAGCAAATTTTGATAATGTTTCTCGTGGAAAAAAAAATCAGTATCTATCTTTA 3108
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 3109 GAACAATGTAATTATAATGTGGGAAGTGTGCATGAATGAGAGAGAGTGTGTGTGTATCTGTGTGTGTGTGCGCG 3182
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 3183 TGTGTGTGTGTCTTTTAATAGTTTATGCCAGCAATCTTTGCTTGAATGTTTAACGATGCCTTCAGTGTGATGCT 3256
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 3257 GGCCAATAGATGATTGCAGTTTAAAATGTCATTATTGTGCAGGCTTGGATAACTAACATTCCATGATGTAGCTT 3330
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 3331 GTTTCTGATGAGATGATTGTAGGTACATTTTTCTCATTATCCAATCATCTGTGGGATACTTAGTTTTCTAATGT 3404
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 3405 GCCATTATCTATTTTTATTCTGCAGTTATGTTCAAAATACAGTACATATTTTAAAATAGAATAAATTGTTAAAC 3478
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 3479 ATAAAATTTTAAAAGTAGTAGATGTGCGTAAGAAAACTTTGTAAAATAGTTATGAGTCCTACCCAGTAGCAACT 3552
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 3553 TCTGGCATTCAAGCAGGATTCCACTATGTAAATATCTGTAATGCATTTATAATAAGTTGTGTAGTTTGTCCTGC 3626
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 3627 ATCCATACTACACTATTTGCTAAAGTCTCAGTGCCATCTCCTAATGAGACTGACATTTTAAAAGTCTGTATGGA 3700
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 3701 ATATCCTTGATAATTCAAGGAAATATCCCTCCTGCCTAAGTTCCAAACTGGGAAACATTCAAATTATATAAATG 3774
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 3775 ACATTTCAGGACTTTAAGTATGAAGATAATGGGAATTTTATTGTTTTGCTTTTTAAAATGAGAGCATTTTTATT 3848
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 3849 TGATAATTTTTTTTAAATTTTTAATTTTTAACTAATTTCATTATTTTAAAGTAATCAGTTTTTCAAATCATGAT 3922
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 3923 TTTGATATCATTATTCTAAGGAGTTATCTCAAAGGCACAAAATATGAATTCTGCAAGAAGGCTATTTTTTATTG 3996
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 3997 TAGTTTGAATGGGTTAGGAAAAGCCTCAATTTTTCACTCTTAAGTCCTTCAGTACATTTTTCTTTCATCTTATT 4070
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 4071 ACTTATGCAAGTTAAGGTTCTTTGGTAACAGAATTCTTGCAACTGTAAAATAAAACTACATAGATGTAAGAAGT 4144
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 4145 CATGTAAACGGTTAACAAGCTTACCAAGGTTAGCAAAACTTTCATTGTAAATCAGTCTGTACTGAGCAAATAAA 4218
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 4219 AATCATTATTAGTTGTATAAACACAAATTCCATTTTGACTTTCAGGATGTCATACTACTTCTGTACCTAGCATT 4292
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 4293 TTCAGTCCTTATATTTGCAATGTTACACAAACTGTACTATTTTCTTTTATGTGCAGTTTGCATGAGTAAACCAT 4366
Query 1516 --------------------------- 1515
Sbjct 4367 CAGAGAATAAATTCTATCTTTAAATTA 4393
