Nucleotide Global Alignment

Description

Query:
TRCN0000469374
Subject:
NR_036570.1
Aligned Length:
3059
Identities:
600
Gaps:
2408

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AATCAGAGCACACCGGACTGCGTTTTTTCCGAACGCCAGCAGCAGGGTCAGAAGGGAGGTAGTCGCCCTCCGTC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GTGGCCTGGCGTGGATTCCGAGCGTTGGTGTCTGGCGGTTTCCGACCGTTGGTGTCTGGCACGCGCCACCCCGA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TGTACCAGGTAAAGCCCTATCACGGGGTCGGCGCCCCTCTCCGTGTGGAGCCCACCTGCATGTACTGGCTCCCC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  AACATGCACGGCAGGAGCGGCGGCCCAGCACTCGGCACTGGCCACTTGCAGACAAGAAGACAAGAAAATGATTT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GAGGACAGCTTCAATCGCGGTGTGAAGAAGAAAGCAACAAAACGACCACTGAAAACAATGCCGGTGGCAAAACA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TCCAAAGAAAGGGTCCCAAGTGGTACATCGTCATAGCTGGAAACAGTCAGAGCCACCAGCCAATGATCTTTTCA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  ATGCTGCGAAAGCTGCCAAAAGTGACATGCAGTGTGGCCATGAGGTCTGCCGGAAGTGACTTGTTGGTGTTATC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TCCTGAGTTAAAATGTGAAGGGATTTTTTTTTTTCAGATTACTGAGAGTCTTCAGTTACTAGATCCAGACACGG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GGACTGCAGAGAAAGGCTGTGTGCATCCGCTGTCTACTCCACTGTCTCCTCTGCAGAGGCGGATTTCCCTGACT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GAAGACCATGTTGCAGGCCCACAGCTGCCTACAGAACCGTCCCAAAATATGGCAAAGAAACCTATTCTGAGCGA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  TAGGGTCTCACCATGTTGCCCAGGCTGGTCTTGAACTCCTGGACTCATCCTAAAGTGCTGGCCTCTCATTCCCT  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  GTCTGTGCACACCTCACGGCAAGGGCCAGCCTGTTTCCTCCCGGTCACCTCCAAATCTTGCTGCTTTTAATTCA  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  ACTCAGAGAAGGGAATCAGCCACTTTGTGCTCACCACCTCTGGGGAAGGTGTGAGAGGAGAGAAGGAAGTGGCT  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  GTTTGGCTGCTGACAACATGAAGACTTCCTGCGATGAGAACAGAGGCACAGGTGCCGGCCCTGCAGCCCCCAGA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  ACCCGGACTGGAGGGGGCCATGGGGCGCCGGACCCTGGCCCTGCCCTGGGTGCTGCTGACCCTGCGTGTCACTG  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  CAGGGACCCCGGAGGTGTGAGTACAAGTTCGGATGGAGGCCACCGAGCTCTCGTCCTTCACCATCCGTTGTGGG  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  TTCCTGGAGTCTGGCTCCATCTCCCTGGTGACTGTGAGCAGGGGGGGCCCCGATGGTGCTGGGGGGACCACGCT  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  GGCTGTGTTGCACCCGGAACTTGGCATCCAGCAATGGGCCCCTGCTCGCCAGGCCCGCTGGGAAACCCAGAGCA  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  GCATCTCTCTCATCCTGGAAGGCTCTGGGGCCAGCAGCCCCTGCGCCAACACCACCTTCTGCTGCAAGTTTGCG  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  TCCTTCCCTGAGGGCTCCTGGGAGGCCTGTGGGAGCCTCCCGCCCAGCTCAGACCCAGGGCTCTCTGTCCCGCC  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  GACTCCTGCCCCCATTCTGCGGGCAGACCTGGCCGGGATCTTGGGGGTCTCAGGAGTCCTTCTCTTTGACTGTG  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  GCTACCTCCTTCATCTGCTGTGCCGACAGAAGCACCGCCCTGCCCCTAGGCTCCAGCCATCCCACACCAGCTCC  1628

Query    1  --------------------ATGGG---TCGGCC---CCT-----GCTGCT------GCCCCTGCTG-------  30
                                |||||   .|.|||   |||     ||||||      |.||||..||       
Sbjct 1629  TAGGCACTGAGAGCACGAGCATGGGCACCCAGCCAGGCCTCCCAGGCTGCTCTCCACGTCCCTTATGCCACTAT  1702

Query   31  ---CTCCTGCTGCAGCCGCCAGC-ATTTCTG----CAGC----------CTGGTGGC--TC----CACAG-GAT  79
               |.||.|||||.||  ||||| |.|| ||    ||||          |.||.|||  ||    ||.|| |..
Sbjct 1703  CAACACCAGCTGCTGC--CCAGCTACTT-TGGACACAGCTCACCCCCGACAGGGGGCCGTCCTGGCATAGCGCG  1773

Query   80  CTGG-------TCCAAGCTACCTTTATGGG-GTCACTCA-ACCAAAACACCTCTCAGCCTC-------------  131
            ||||       ||||  .||||.|.|.||| |.||.|.| |.|   |.||.|||..|||||             
Sbjct 1774  CTGGCTAGGACTCCA--GTACCGTGAAGGGAGGCAGTGAGAGC---AGACATCTGTGCCTCATTCCTGATCTCA  1842

Query  132  ---------------CATGGGTGGCT-----------------CTGTGGAA-----ATCCCCTTC----TCCTT  164
                           ||.|||.||||                 |||.||||     |  ||..||    |.|||
Sbjct 1843  AGGGGAAAGCAAGAACAAGGGAGGCTTCCTCAGGATCTCGAACCTGCGGAAGGAGGA--CCAGTCTGTGTACTT  1914

Query  165  CTATTACCCCTGGGAGTTAGCCATAGTTCCCAACGTGAGA---ATATCCTGGAG-------------------A  216
            ||                 |||| |||  |||.|..||.|   |.|||..||||                   |
Sbjct 1915  CT-----------------GCCA-AGT--CCAGCTGGACATACAGATCAGGGAGGCTGTCGTGGCAGTCCATCA  1968

Query  217  CGGGG--CCACTT---------------CCACGGGCAGTCCTTCTAC---------------------------  246
            .||||  ||||.|               ||.|.|||||.||.||.||                           
Sbjct 1969  AGGGGACCCACCTCACCATCACCCAGGCCCTCAGGCAGCCCCTCCACAGGGCCCCTCTCCTGCCTGGACAGCTC  2042

Query  247  -------------------------AGCACAAGGC----------CGCCTTC----------------------  263
                                     ||.|||||||          |.|||.|                      
Sbjct 2043  TGCTGGTCTCCCCGTCCCCTGGAGAAGAACAAGGCCATGGGTCGGCCCCTGCTGCTGCCCCTGCTGCTCCTGCT  2116

Query  264  -----------CATT----CA-CAAGGATTATGTGAACCGGCTCTTTCTGAACTGGACAGAGGGTCAGGAGAGC  321
                       ||||    || |..|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2117  GCAGCCGCCAGCATTTCTGCAGCCTGGATTATGTGAACCGGCTCTTTCTGAACTGGACAGAGGGTCAGGAGAGC  2190

Query  322  GGCTTCCTCAGGATCTCAAACCTGCGGAAGGAGGACCAGTCTGTGTATTTCTGCCGAGTCGAGCTGGACACCCG  395
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2191  GGCTTCCTCAGGATCTCAAACCTGCGGAAGGAGGACCAGTCTGTGTATTTCTGCCGAGTCGAGCTGGACACCCG  2264

Query  396  GAGATCAGGGAGGCAGCAGTTGCAGTCCATCAAGGGGACCAAACTCACCATCACCCAGGCTGTCACAACCACCA  469
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2265  GAGATCAGGGAGGCAGCAGTTGCAGTCCATCAAGGGGACCAAACTCACCATCACCCAGGCTGTCACAACCACCA  2338

Query  470  CCACCTGGAGGCCCAGCAGCACAACCACCATAGCCGGCCTCAGGGTCACAGAAAGCAAAGGGCACTCAGAATCA  543
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2339  CCACCTGGAGGCCCAGCAGCACAACCACCATAGCCGGCCTCAGGGTCACAGAAAGCAAAGGGCACTCAGAATCA  2412

Query  544  TGGCACCTAAGTCTGGACACTGCCATCAGGGTTGCATTGGCTGTCGCTGTGCTCAAAACTGTCATTTTGGGACT  617
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2413  TGGCACCTAAGTCTGGACACTGCCATCAGGGTTGCATTGGCTGTCGCTGTGCTCAAAACTGTCATTTTGGGACT  2486

Query  618  GCTGTGCCTCCTCCTCCTGTGGTGGAGGAGAAGGAAAGGTAGCAGGGCGCCAAGCAGTGACTTC----------  681
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          
Sbjct 2487  GCTGTGCCTCCTCCTCCTGTGGTGGAGGAGAAGGAAAGGTAGCAGGGCGCCAAGCAGTGACTTCTGACCAACAG  2560

Query  682  --------------------------------------------------------------------------  681
                                                                                      
Sbjct 2561  AGTGTGGGGAGAAGGGATGTGTATTAGCCCCGGAGGACGTGATGTGAGACCCGCTTGTGAGTCCTCCACACTCG  2634

Query  682  --------------------------------------------------------------------------  681
                                                                                      
Sbjct 2635  TTCCCCATTGGCAAGATACATGGAGAGCACCCTGAGGACCTTTAAAAGGCAAAGCCGCAAGGCAGAAGGAGGCT  2708

Query  682  --------------------------------------------------------------------------  681
                                                                                      
Sbjct 2709  GGGTCCCTGAATCACCGACTGGAGGAGAGTTACCTACAAGAGCCTTCATCCAGGAGCATCCACACTGCAATGAT  2782

Query  682  --------------------------------------------------------------------------  681
                                                                                      
Sbjct 2783  ATAGGAATGAGGTCTGAACTCCACTGAATTAAACCACTGGCATTTGGGGGCTGTTTATTATAGCAGTGCAAAGA  2856

Query  682  --------------------------------------------------------------------------  681
                                                                                      
Sbjct 2857  GTTCCTTTATCCTCCCCAAGGATGGAAAAATACAATTTATTTTGCTTACCATACACCCCTTTTCTCCTCGTCCA  2930

Query  682  --------------------------------------------------------------------------  681
                                                                                      
Sbjct 2931  CATTTTCCAATCTGTATGGTGGCTGTCTTCTATGGCAGAAGGTTTTGGGGAATAAATAGCGTGAAATGCTGCTG  3004

Query  682  -------------------------  681
                                     
Sbjct 3005  ACAAAAAAAAAAAAAAAAAAAAAAA  3029

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