Nucleotide Global Alignment
Description
- Query:
- TRCN0000469374
- Subject:
- NR_036570.1
- Aligned Length:
- 3059
- Identities:
- 600
- Gaps:
- 2408
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AATCAGAGCACACCGGACTGCGTTTTTTCCGAACGCCAGCAGCAGGGTCAGAAGGGAGGTAGTCGCCCTCCGTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTGGCCTGGCGTGGATTCCGAGCGTTGGTGTCTGGCGGTTTCCGACCGTTGGTGTCTGGCACGCGCCACCCCGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGTACCAGGTAAAGCCCTATCACGGGGTCGGCGCCCCTCTCCGTGTGGAGCCCACCTGCATGTACTGGCTCCCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AACATGCACGGCAGGAGCGGCGGCCCAGCACTCGGCACTGGCCACTTGCAGACAAGAAGACAAGAAAATGATTT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GAGGACAGCTTCAATCGCGGTGTGAAGAAGAAAGCAACAAAACGACCACTGAAAACAATGCCGGTGGCAAAACA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCCAAAGAAAGGGTCCCAAGTGGTACATCGTCATAGCTGGAAACAGTCAGAGCCACCAGCCAATGATCTTTTCA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ATGCTGCGAAAGCTGCCAAAAGTGACATGCAGTGTGGCCATGAGGTCTGCCGGAAGTGACTTGTTGGTGTTATC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TCCTGAGTTAAAATGTGAAGGGATTTTTTTTTTTCAGATTACTGAGAGTCTTCAGTTACTAGATCCAGACACGG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGACTGCAGAGAAAGGCTGTGTGCATCCGCTGTCTACTCCACTGTCTCCTCTGCAGAGGCGGATTTCCCTGACT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GAAGACCATGTTGCAGGCCCACAGCTGCCTACAGAACCGTCCCAAAATATGGCAAAGAAACCTATTCTGAGCGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TAGGGTCTCACCATGTTGCCCAGGCTGGTCTTGAACTCCTGGACTCATCCTAAAGTGCTGGCCTCTCATTCCCT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GTCTGTGCACACCTCACGGCAAGGGCCAGCCTGTTTCCTCCCGGTCACCTCCAAATCTTGCTGCTTTTAATTCA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ACTCAGAGAAGGGAATCAGCCACTTTGTGCTCACCACCTCTGGGGAAGGTGTGAGAGGAGAGAAGGAAGTGGCT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GTTTGGCTGCTGACAACATGAAGACTTCCTGCGATGAGAACAGAGGCACAGGTGCCGGCCCTGCAGCCCCCAGA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ACCCGGACTGGAGGGGGCCATGGGGCGCCGGACCCTGGCCCTGCCCTGGGTGCTGCTGACCCTGCGTGTCACTG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CAGGGACCCCGGAGGTGTGAGTACAAGTTCGGATGGAGGCCACCGAGCTCTCGTCCTTCACCATCCGTTGTGGG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TTCCTGGAGTCTGGCTCCATCTCCCTGGTGACTGTGAGCAGGGGGGGCCCCGATGGTGCTGGGGGGACCACGCT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GGCTGTGTTGCACCCGGAACTTGGCATCCAGCAATGGGCCCCTGCTCGCCAGGCCCGCTGGGAAACCCAGAGCA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GCATCTCTCTCATCCTGGAAGGCTCTGGGGCCAGCAGCCCCTGCGCCAACACCACCTTCTGCTGCAAGTTTGCG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TCCTTCCCTGAGGGCTCCTGGGAGGCCTGTGGGAGCCTCCCGCCCAGCTCAGACCCAGGGCTCTCTGTCCCGCC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GACTCCTGCCCCCATTCTGCGGGCAGACCTGGCCGGGATCTTGGGGGTCTCAGGAGTCCTTCTCTTTGACTGTG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GCTACCTCCTTCATCTGCTGTGCCGACAGAAGCACCGCCCTGCCCCTAGGCTCCAGCCATCCCACACCAGCTCC 1628
Query 1 --------------------ATGGG---TCGGCC---CCT-----GCTGCT------GCCCCTGCTG------- 30
||||| .|.||| ||| |||||| |.||||..||
Sbjct 1629 TAGGCACTGAGAGCACGAGCATGGGCACCCAGCCAGGCCTCCCAGGCTGCTCTCCACGTCCCTTATGCCACTAT 1702
Query 31 ---CTCCTGCTGCAGCCGCCAGC-ATTTCTG----CAGC----------CTGGTGGC--TC----CACAG-GAT 79
|.||.|||||.|| ||||| |.|| || |||| |.||.||| || ||.|| |..
Sbjct 1703 CAACACCAGCTGCTGC--CCAGCTACTT-TGGACACAGCTCACCCCCGACAGGGGGCCGTCCTGGCATAGCGCG 1773
Query 80 CTGG-------TCCAAGCTACCTTTATGGG-GTCACTCA-ACCAAAACACCTCTCAGCCTC------------- 131
|||| |||| .||||.|.|.||| |.||.|.| |.| |.||.|||..|||||
Sbjct 1774 CTGGCTAGGACTCCA--GTACCGTGAAGGGAGGCAGTGAGAGC---AGACATCTGTGCCTCATTCCTGATCTCA 1842
Query 132 ---------------CATGGGTGGCT-----------------CTGTGGAA-----ATCCCCTTC----TCCTT 164
||.|||.|||| |||.|||| | ||..|| |.|||
Sbjct 1843 AGGGGAAAGCAAGAACAAGGGAGGCTTCCTCAGGATCTCGAACCTGCGGAAGGAGGA--CCAGTCTGTGTACTT 1914
Query 165 CTATTACCCCTGGGAGTTAGCCATAGTTCCCAACGTGAGA---ATATCCTGGAG-------------------A 216
|| |||| ||| |||.|..||.| |.|||..|||| |
Sbjct 1915 CT-----------------GCCA-AGT--CCAGCTGGACATACAGATCAGGGAGGCTGTCGTGGCAGTCCATCA 1968
Query 217 CGGGG--CCACTT---------------CCACGGGCAGTCCTTCTAC--------------------------- 246
.|||| ||||.| ||.|.|||||.||.||.||
Sbjct 1969 AGGGGACCCACCTCACCATCACCCAGGCCCTCAGGCAGCCCCTCCACAGGGCCCCTCTCCTGCCTGGACAGCTC 2042
Query 247 -------------------------AGCACAAGGC----------CGCCTTC---------------------- 263
||.||||||| |.|||.|
Sbjct 2043 TGCTGGTCTCCCCGTCCCCTGGAGAAGAACAAGGCCATGGGTCGGCCCCTGCTGCTGCCCCTGCTGCTCCTGCT 2116
Query 264 -----------CATT----CA-CAAGGATTATGTGAACCGGCTCTTTCTGAACTGGACAGAGGGTCAGGAGAGC 321
|||| || |..|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2117 GCAGCCGCCAGCATTTCTGCAGCCTGGATTATGTGAACCGGCTCTTTCTGAACTGGACAGAGGGTCAGGAGAGC 2190
Query 322 GGCTTCCTCAGGATCTCAAACCTGCGGAAGGAGGACCAGTCTGTGTATTTCTGCCGAGTCGAGCTGGACACCCG 395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2191 GGCTTCCTCAGGATCTCAAACCTGCGGAAGGAGGACCAGTCTGTGTATTTCTGCCGAGTCGAGCTGGACACCCG 2264
Query 396 GAGATCAGGGAGGCAGCAGTTGCAGTCCATCAAGGGGACCAAACTCACCATCACCCAGGCTGTCACAACCACCA 469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2265 GAGATCAGGGAGGCAGCAGTTGCAGTCCATCAAGGGGACCAAACTCACCATCACCCAGGCTGTCACAACCACCA 2338
Query 470 CCACCTGGAGGCCCAGCAGCACAACCACCATAGCCGGCCTCAGGGTCACAGAAAGCAAAGGGCACTCAGAATCA 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2339 CCACCTGGAGGCCCAGCAGCACAACCACCATAGCCGGCCTCAGGGTCACAGAAAGCAAAGGGCACTCAGAATCA 2412
Query 544 TGGCACCTAAGTCTGGACACTGCCATCAGGGTTGCATTGGCTGTCGCTGTGCTCAAAACTGTCATTTTGGGACT 617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2413 TGGCACCTAAGTCTGGACACTGCCATCAGGGTTGCATTGGCTGTCGCTGTGCTCAAAACTGTCATTTTGGGACT 2486
Query 618 GCTGTGCCTCCTCCTCCTGTGGTGGAGGAGAAGGAAAGGTAGCAGGGCGCCAAGCAGTGACTTC---------- 681
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2487 GCTGTGCCTCCTCCTCCTGTGGTGGAGGAGAAGGAAAGGTAGCAGGGCGCCAAGCAGTGACTTCTGACCAACAG 2560
Query 682 -------------------------------------------------------------------------- 681
Sbjct 2561 AGTGTGGGGAGAAGGGATGTGTATTAGCCCCGGAGGACGTGATGTGAGACCCGCTTGTGAGTCCTCCACACTCG 2634
Query 682 -------------------------------------------------------------------------- 681
Sbjct 2635 TTCCCCATTGGCAAGATACATGGAGAGCACCCTGAGGACCTTTAAAAGGCAAAGCCGCAAGGCAGAAGGAGGCT 2708
Query 682 -------------------------------------------------------------------------- 681
Sbjct 2709 GGGTCCCTGAATCACCGACTGGAGGAGAGTTACCTACAAGAGCCTTCATCCAGGAGCATCCACACTGCAATGAT 2782
Query 682 -------------------------------------------------------------------------- 681
Sbjct 2783 ATAGGAATGAGGTCTGAACTCCACTGAATTAAACCACTGGCATTTGGGGGCTGTTTATTATAGCAGTGCAAAGA 2856
Query 682 -------------------------------------------------------------------------- 681
Sbjct 2857 GTTCCTTTATCCTCCCCAAGGATGGAAAAATACAATTTATTTTGCTTACCATACACCCCTTTTCTCCTCGTCCA 2930
Query 682 -------------------------------------------------------------------------- 681
Sbjct 2931 CATTTTCCAATCTGTATGGTGGCTGTCTTCTATGGCAGAAGGTTTTGGGGAATAAATAGCGTGAAATGCTGCTG 3004
Query 682 ------------------------- 681
Sbjct 3005 ACAAAAAAAAAAAAAAAAAAAAAAA 3029
