Nucleotide Global Alignment

Description

Query:
TRCN0000469377
Subject:
NR_110893.1
Aligned Length:
3222
Identities:
1139
Gaps:
2083

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GTGACAGAAGTAGTAGGAAGTGAGCTGTTCAGAGGCAGGAGGGTCTATTCTTTGCCAAAGGGGGGACCAGAATT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CCCCCATGCGAGCTGTTTGAGGACTGGGATGCCGAGAACGCGAGCGATCCGAGCAGGGTTTGTCTGGGCACCGT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CGGGGTAGGATCCGGAACGCATTCGGAAGGCTTTTTGCAAGCATTTACTTGGAAGGAGAACTTGGGATCTTTCT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GGGAACCCCCCGCCCCGGCTGGATTGGCCGAGCAAGCCTGGAAAATGGTAAATGATCATTTGGATCAATTACAG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GCTTTTAGCTGGCTTGTCTGTCATAATTCATGATTCGGGGCTGGGAAAAAGACCAACAGCCTACGTGCCAAAAA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  AGGGGCAGAGTTTGATGGAGTTGGGTGGACTTTTCTATGCCATTTGCCTCCACACCTAGAGGATAAGCACTTTT  444

Query    1  -------------------------ATGTTTGACTGTATGGATGTTCTGTCAGTGAGTCCTGGGCAAATCCTGG  49
                                     |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GCAGACATTCAGTGCAAGGGAGATCATGTTTGACTGTATGGATGTTCTGTCAGTGAGTCCTGGGCAAATCCTGG  518

Query   50  ATTTCTACACTGCGAGTCCGTCTTCCTGCATGCTCCAGGAGAAAGCTCTCAAAGCATGCTTCAGTGGATTGACC  123
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  ATTTCTACACTGCGAGTCCGTCTTCCTGCATGCTCCAGGAGAAAGCTCTCAAAGCATGCTTCAGTGGATTGACC  592

Query  124  CAAACCGAATGGCAGCATCGGCACACTGCTCAATCAATTGAAACACAGAGCACCAGCTCTGAGGAACTCGTCCC  197
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  CAAACCGAATGGCAGCATCGGCACACTGCTCAATCAATTGAAACACAGAGCACCAGCTCTGAGGAACTCGTCCC  666

Query  198  AAGCCCCCCATCTCCACTTCCTCCCCCTCGAGTGTACAAACCCTGCTTCGTCTGCCAGGACAAATCATCAGGGT  271
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  AAGCCCCCCATCTCCACTTCCTCCCCCTCGAGTGTACAAACCCTGCTTCGTCTGCCAGGACAAATCATCAGGGT  740

Query  272  ACCACTATGGGGTCAGCGCCTGTGAGGGATGTAAGGGCTTTTTCCGCAGAAGTATTCAGAAGAATATGATTTAC  345
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  ACCACTATGGGGTCAGCGCCTGTGAGGGATGTAAGGGCTTTTTCCGCAGAAGTATTCAGAAGAATATGATTTAC  814

Query  346  ACTTGTCACCGAGATAAGAACTGTGTTATTAATAAAGTCACCAGGAATCGATGCCAATACTGTCGACTCCAGAA  419
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  ACTTGTCACCGAGATAAGAACTGTGTTATTAATAAAGTCACCAGGAATCGATGCCAATACTGTCGACTCCAGAA  888

Query  420  GTGCTTTGAAGTGGGAATGTCCAAAGAATCTGTCAGGAATGACAGGAACAAGAAAAAGAAGGAGACTTCGAAGC  493
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  GTGCTTTGAAGTGGGAATGTCCAAAGAATCTGTCAGGAATGACAGGAACAAGAAAAAGAAGGAGACTTCGAAGC  962

Query  494  AAGAATGCACAGAGAGCTATGAAATGACAGCTGAGTTGGACGATCTCACAGAGAAGATCCGAAAAGCTCACCAG  567
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  AAGAATGCACAGAGAGCTATGAAATGACAGCTGAGTTGGACGATCTCACAGAGAAGATCCGAAAAGCTCACCAG  1036

Query  568  GAAACTTTCCCTTCACTCTGCCAGCTGGGTAAATACACCACGAATTCCAGTGCTGACCATCGAGTCCGACTGGA  641
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  GAAACTTTCCCTTCACTCTGCCAGCTGGGTAAATACACCACGAATTCCAGTGCTGACCATCGAGTCCGACTGGA  1110

Query  642  CCTGGGCCTCTGGGACAAATTCAGTGAACTGGCCACCAAGTGCATTATTAAGATCGTGGAGTTTGCTAAACGTC  715
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  CCTGGGCCTCTGGGACAAATTCAGTGAACTGGCCACCAAGTGCATTATTAAGATCGTGGAGTTTGCTAAACGTC  1184

Query  716  TGCCTGGTTTCACTGGCTTGACCATCGCAGACCAAATTACCCTGCTGAAGGCCGCCTGCCTGGACATCCTGATT  789
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
Sbjct 1185  TGCCTGGTTTCACTGGCTTGACCATCGCAGACCAAATTACCCTGCTGAAGGCCGCCTGCCTGGACATCCT----  1254

Query  790  CTTAGAATTTGCACCAGGTATACCCCAGAACAAGACACCATGACTTTCTCAGACGGCCTTACCCTAAATCGAAC  863
                                                                                      
Sbjct 1255  --------------------------------------------------------------------------  1254

Query  864  TCAGATGCACAATGCTGGATTTGGTCCTCTGACTGACCTTGTGTTCACCTTTGCCAACCAGCTCCTGCCTTTGG  937
                                                                                      
Sbjct 1255  --------------------------------------------------------------------------  1254

Query  938  AAATGGATGACACAGAAACAGGCCTTCTCAGTGCCATCTGCTTAATCTGTGGAGACCGCCAGGACCTTGAGGAA  1011
                                                                 |||||||||||||||||||||
Sbjct 1255  -----------------------------------------------------GACCGCCAGGACCTTGAGGAA  1275

Query 1012  CCGACAAAAGTAGATAAGCTACAAGAACCATTGCTGGAAGCACTAAAAATTTATATCAGAAAAAGACGACCCAG  1085
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1276  CCGACAAAAGTAGATAAGCTACAAGAACCATTGCTGGAAGCACTAAAAATTTATATCAGAAAAAGACGACCCAG  1349

Query 1086  CAAGCCTCACATGTTTCCAAAGATCTTAATGAAAATCACAGATCTCCGTAGCATCAGTGCTAAAGGTGCAGAGC  1159
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1350  CAAGCCTCACATGTTTCCAAAGATCTTAATGAAAATCACAGATCTCCGTAGCATCAGTGCTAAAGGTGCAGAGC  1423

Query 1160  GTGTAATTACCTTGAAAATGGAAATTCCTGGATCAATGCCACCTCTCATTCAAGAAATGCTGGAGAATTCTGAA  1233
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1424  GTGTAATTACCTTGAAAATGGAAATTCCTGGATCAATGCCACCTCTCATTCAAGAAATGCTGGAGAATTCTGAA  1497

Query 1234  GGACATGAACCCTTGACCCCAAGTTCAAGTGGGAACACAGCAGAGCACAGTCCTAGCATCTCACCCAGCTCAGT  1307
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1498  GGACATGAACCCTTGACCCCAAGTTCAAGTGGGAACACAGCAGAGCACAGTCCTAGCATCTCACCCAGCTCAGT  1571

Query 1308  GGAAAACAGTGGGGTCAGTCAGTCACCACTCGTGCAA-------------------------------------  1344
            |||||||||||||||||||||||||||||||||||||                                     
Sbjct 1572  GGAAAACAGTGGGGTCAGTCAGTCACCACTCGTGCAATAAGACATTTTCTAGCTACTTCAAACATTCCCCAGTA  1645

Query 1345  --------------------------------------------------------------------------  1344
                                                                                      
Sbjct 1646  CCTTCAGTTCCAGGATTTAAAATGCAAGAAAAAACATTTTTACTGCTGCTTAGTTTTTGGACTGAAAAGATATT  1719

Query 1345  --------------------------------------------------------------------------  1344
                                                                                      
Sbjct 1720  AAAACTCAAGAAGGACCAAGAAGTTTTCATATGTATCAATATATATACTCCTCACTGTGTAACTTACCTAGAAA  1793

Query 1345  --------------------------------------------------------------------------  1344
                                                                                      
Sbjct 1794  TACAAACTTTTCCAATTTTAAAAAATCAGCCATTTCATGCAACCAGAAACTAGTTAAAAGCTTCTATTTTCCTC  1867

Query 1345  --------------------------------------------------------------------------  1344
                                                                                      
Sbjct 1868  TTTGAACACTCAAGATTGCATGGCAAAGACCCAGTCAAAATGATTTACCCCTGGTTAAGTTTCTGAAGACTTTG  1941

Query 1345  --------------------------------------------------------------------------  1344
                                                                                      
Sbjct 1942  TACATACAGAAGTATGGCTCTGTTCTTTCTATACTGTATGTTTGGTGCTTTCCTTTTGTCTTGCATACTCAAAA  2015

Query 1345  --------------------------------------------------------------------------  1344
                                                                                      
Sbjct 2016  TAACCATGACACCAAGGTTATGAAATAGACTACTGTACACGTCTACCTAGGTTCAAAAAGATAACTGTCTTGCT  2089

Query 1345  --------------------------------------------------------------------------  1344
                                                                                      
Sbjct 2090  TTCATGGAATAGTCAAGACATCAAGGTAAGGAAACAGGACTATTGACAGGACTATTGTACAGTATGACAAGATA  2163

Query 1345  --------------------------------------------------------------------------  1344
                                                                                      
Sbjct 2164  AGGCTGAAGATATTCTACTTTAGTTAGTATGGAAGCTTGTCTTTGCTCTTTCTGATGCTCTCAAACTGCATCTT  2237

Query 1345  --------------------------------------------------------------------------  1344
                                                                                      
Sbjct 2238  TTATTTCATGTTGCCCAGTAAAAGTATACAAATTCCCTGCACTAGCAGAAGAGAATTCTGTATCAGTGTAACTG  2311

Query 1345  --------------------------------------------------------------------------  1344
                                                                                      
Sbjct 2312  CCAGTTCAGTTAATCAAATGTCATTTGTTCAATTGTTAATGTCACTTTAAATTAAAAGTGGTTTATTACTTGTT  2385

Query 1345  --------------------------------------------------------------------------  1344
                                                                                      
Sbjct 2386  TAATGACATAACTACACAGTTAGTTAAAAAAAATTTTTTTACAGTAATGATAGCCTCCAAGGCAGAAACACTTT  2459

Query 1345  --------------------------------------------------------------------------  1344
                                                                                      
Sbjct 2460  TCAGTGTTAAGTTTTTGTTTACTTGTTCACAAGCCATTAGGGAAATTTCATGGGATAATTAGCAGGCTGGTCTA  2533

Query 1345  --------------------------------------------------------------------------  1344
                                                                                      
Sbjct 2534  CCACCTGGACCATGTAACTCTAGTGTCCTTCCTGATTCATGCCTGATATTGGGATTTTTTTTTCCAGCCTTCTT  2607

Query 1345  --------------------------------------------------------------------------  1344
                                                                                      
Sbjct 2608  GATGCCAAGGGGCTAATTAATATTAACAACTCCCAAAGAAACAGGCATAGAATCTGCCTCCTTTGACCTTGTTC  2681

Query 1345  --------------------------------------------------------------------------  1344
                                                                                      
Sbjct 2682  AATCACTATGAAGCAGAGTGAAAGCTGTGGTAGAGTGGTTAACAGATACAAGTGTCAGTTTCTTAGTTCTCATT  2755

Query 1345  --------------------------------------------------------------------------  1344
                                                                                      
Sbjct 2756  TAAGCACTAGTGGAATTTTTTTTTTTTGATATATTAGCAAGTCTGTGATGTACTTTCACTGGCTCTGTTTGTAC  2829

Query 1345  --------------------------------------------------------------------------  1344
                                                                                      
Sbjct 2830  ATTGAGATTGTTTGTTTAACAATGCTTTCTATGTTCATATACTGTTTACCTTTTTCCATGGAGTCTCCTGGCAA  2903

Query 1345  --------------------------------------------------------------------------  1344
                                                                                      
Sbjct 2904  AGAATAAAATATATTTATTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA  2977

Query 1345  ----------------------------------------  1344
                                                    
Sbjct 2978  AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA  3017

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