Nucleotide Global Alignment

Description

• Query: TRCN0000469531
• Subject: XM_006511830.3
• Aligned Length: 1235
• Identities: 859
• Gaps: 274

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGCTGCTCCCAGCCAGGAGGACCCCTCACTGGAGAGACATTTTAAGGGCCACCGAGATGCAGTCACCTGTGT  74

Query    1  -------------------------------------------------------ATGGTCTGGCACATGAAGC  19
                                                                   |||.|||||||||||||||
Sbjct   75  GGACTTCAGTCTCAACACCAAGCACTTGGCCAGTGGCTCCATGGACTCAACCCTCATGATCTGGCACATGAAGC  148

Query   20  CGCAGTCACGCGCCTACCGCTTCACTGGCCACAAGGATGCCGTCACCTGTGTGAACTTCTCTCCTTCGGGACAC  93
            |.||||||||.||||||||||||||.|||||||||||.||.||.|||||||||||.|||||.||.|||||||||
Sbjct  149  CCCAGTCACGTGCCTACCGCTTCACGGGCCACAAGGACGCTGTGACCTGTGTGAATTTCTCCCCATCGGGACAC  222

Query   94  CTGCTTGCTTCCGGCTCCCGAGACAAGACTGTCCGCATCTGGGTACCCAATGTCAAAGGTGAGTCCACTGTGTT  167
            ||.|||||.||.||||||||||||||||||||.||||||||||||||||||||||||||||||||.|||||.||
Sbjct  223  CTTCTTGCCTCAGGCTCCCGAGACAAGACTGTTCGCATCTGGGTACCCAATGTCAAAGGTGAGTCAACTGTATT  296

Query  168  TCGTGCACACACAGCCACAGTGAGGAGTGTCCACTTCTGCAGTGATGGCCAGTC-CTTCGTGACAGCCTCTGAC  240
            ||||||||||||.|||||||||||||||||||||||||||||.||||||||||| ||| ||||||||||||||.
Sbjct  297  TCGTGCACACACGGCCACAGTGAGGAGTGTCCACTTCTGCAGCGATGGCCAGTCACTT-GTGACAGCCTCTGAT  369

Query  241  GACAAGACAGTCAAAGTGTGGGCAACTCATCGCCAGAAATTCCTGTTCTCCCTGAGCCAGCATATCAACTGGGT  314
            |||||||||||||||||||||.|||||||||||||||.|||||||||.|||||||.||||||.|||||||||||
Sbjct  370  GACAAGACAGTCAAAGTGTGGTCAACTCATCGCCAGAGATTCCTGTTTTCCCTGACCCAGCACATCAACTGGGT  443

Query  315  CCGCTGTGCCAAGTTCTCCCCCGACGGGCGGCTCATCGTGTCTGCCAGTGATGACAAGACTGTTAAGCTGTGGG  388
            |||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||.||||||||||
Sbjct  444  CCGCTGTGCCAAGTTCTCCCCTGACGGGCGGCTCATCGTGTCTGCCAGTGATGACAAGACTGTCAAGCTGTGGG  517

Query  389  ACAAGAGCAGCCGGGAATGTGTCCACTCGTATTGTGAGCATGGCGGCTTTGTCACCTATGTGGACTTCCACCCC  462
            ||||||.|||||||||||||.|||||||.||.||||||||.|||||.|||||||||||.|||||||||||||||
Sbjct  518  ACAAGACCAGCCGGGAATGTATCCACTCATACTGTGAGCACGGCGGTTTTGTCACCTACGTGGACTTCCACCCC  591

Query  463  AGTGGGACGTGCATTGCCGCTGCCGGCATGGACAACACAGTGAAGGTGTGGGACGTGCGGACTCACCGGCTGCT  536
            |||||.||.||||||||.||||||||||||||||||||.||||||||||||||.|.|||||||||.||||||.|
Sbjct  592  AGTGGTACCTGCATTGCTGCTGCCGGCATGGACAACACGGTGAAGGTGTGGGATGCGCGGACTCATCGGCTGTT  665

Query  537  GCAGCATTATCAGTTGCACAGTGCAGCAGTGAACGGGCTCTCTTTCCACCCGTCGGGAAACTACCTGATCACAG  610
            |||||||||||||||.|||||||||||.|||||.|..|||||.||||||||.||||||||||||||.|||||||
Sbjct  666  GCAGCATTATCAGTTACACAGTGCAGCCGTGAATGCCCTCTCCTTCCACCCATCGGGAAACTACCTCATCACAG  739

Query  611  CCTCCAGTGACTCAACCCTGAAGATCCTGGACCTGATGGAGGGCCGGCTGCTCTACACACTCCACGGGCATCAG  684
            ||||||||||||||||.||||||||||||||||||||||||||||||||||||||.||.|||||.|||||.|||
Sbjct  740  CCTCCAGTGACTCAACGCTGAAGATCCTGGACCTGATGGAGGGCCGGCTGCTCTATACGCTCCATGGGCACCAG  813

Query  685  GGACCAGCCACCACTGTTGCCTTTTCAAGAACGGGGGAGTATTTTGCTTCTGGAGGCTCTGATGAACAAGTGAT  758
            ||.||.||.|||||.|||||||||||||||||||||||||||||.||||||||||||||.|||||.||.|||||
Sbjct  814  GGGCCTGCTACCACCGTTGCCTTTTCAAGAACGGGGGAGTATTTCGCTTCTGGAGGCTCCGATGAGCAGGTGAT  887

Query  759  GGTTTGGAAGAGTAACTTTGATATTGTTGATCATGGAGAAGTCACGAAAGTGCCGAGGCCCCCAGCCACACTGG  832
            |||.|||||||||||||||||.|||||||||.|||||||   ||.|||.|..|.||||||||||.||   ||..
Sbjct  888  GGTCTGGAAGAGTAACTTTGACATTGTTGATTATGGAGA---CATGAAGGCACGGAGGCCCCCACCC---CTAA  955

Query  833  CCAGCTCCATGGGGAA-TCTGCCAGAAGTGGACTTCCCTGTCCCCCCA--GG----CAGAGG--CAGGA----G  893
            |||||| |.|..|||| ||||     .||||              |||  ||    ||||||  || ||    |
Sbjct  956  CCAGCT-CTTCTGGAACTCTG-----TGTGG--------------CCATTGGAAACCAGAGGGACA-GACCTTG  1008

Query  894  TGTGGAGTCTGTGCAGAGCCAGCCCCAGGAGCCCGTGAGTGTGCCCCAGACACTGACTAGCACGCTGGAGCACA  967
            ..|||| ||..||      |.||.||.|.|.|||.| ||       ||||.||||.|.||.||    .|||   
Sbjct 1009  CCTGGA-TCCTTG------CTGCTCCCGCATCCCCT-AG-------CAGAGACTGGCAAGGAC----AAGC---  1060

Query  968  TTGTGGGCCAGCTGGATGTCCTCACTCAGACAGTCTCCATTCTGGAGCAGCGGTTGACACTGACAGAAGACAAG  1041
            |||||.||| ..||||.|||||           ||.||   ||.||||.|       |.|||.|.|        
Sbjct 1061  TTGTGAGCC-TTTGGAGGTCCT-----------TCACC---CTTGAGCCG-------CCCTGCCTG--------  1104

Query 1042  CTGAAGCAGTGTCTGGAGAACCAGCAGCTAATCATGCAGAGAGCAACACCA  1092
                                                               
Sbjct 1105  ---------------------------------------------------  1104