Nucleotide Global Alignment

Description

• Query: TRCN0000469531
• Subject: XM_006511831.3
• Aligned Length: 1222
• Identities: 822
• Gaps: 311

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGCTGCTCCCAGCCAGGAGGACCCCTCACTGGAGAGACATTTTAAGGGCCACCGAGATGCAGTCACCTGTGT  74

Query    1  -------------------------------------------------------ATGGTCTGGCACATGAAGC  19
                                                                   |||.|||||||||||||||
Sbjct   75  GGACTTCAGTCTCAACACCAAGCACTTGGCCAGTGGCTCCATGGACTCAACCCTCATGATCTGGCACATGAAGC  148

Query   20  CGCAGTCACGCGCCTACCGCTTCACTGGCCACAAGGATGCCGTCACCTGTGTGAACTTCTCTCCTTCGGGACAC  93
            |.||||||||.||||||||||||||.|||||||||||.||.||.|||||||||||.|||||.||.|||||||||
Sbjct  149  CCCAGTCACGTGCCTACCGCTTCACGGGCCACAAGGACGCTGTGACCTGTGTGAATTTCTCCCCATCGGGACAC  222

Query   94  CTGCTTGCTTCCGGCTCCCGAGACAAGACTGTCCGCATCTGGGTACCCAATGTCAAAGGTGAGTCCACTGTGTT  167
            ||.|||||.||.||||||||||||||||||||.||||||||||||||||||||||||||||||||.|||||.||
Sbjct  223  CTTCTTGCCTCAGGCTCCCGAGACAAGACTGTTCGCATCTGGGTACCCAATGTCAAAGGTGAGTCAACTGTATT  296

Query  168  TCGTGCACACACAGCCACAGTGAGGAGTGTCCACTTCTGCAGTGATGGCCAGTC-CTTCGTGACAGCCTCTGAC  240
            ||||||||||||.|||||||||||||||||||||||||||||.||||||||||| ||| ||||||||||||||.
Sbjct  297  TCGTGCACACACGGCCACAGTGAGGAGTGTCCACTTCTGCAGCGATGGCCAGTCACTT-GTGACAGCCTCTGAT  369

Query  241  GACAAGACAGTCAAAGTGTGGGCAACTCATCGCCAGAAATTCCTGTTCTCCCTGAGCCAGCATATCAACTGGGT  314
            |||||||||||||||||||||.|||||||||||||||.|||||||||.|||||||.||||||.|||||||||||
Sbjct  370  GACAAGACAGTCAAAGTGTGGTCAACTCATCGCCAGAGATTCCTGTTTTCCCTGACCCAGCACATCAACTGGGT  443

Query  315  CCGCTGTGCCAAGTTCTCCCCCGACGGGCGGCTCATCGTGTCTGCCAGTGATGACAAGACTGTTAAGCTGTGGG  388
            |||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||.||||||||||
Sbjct  444  CCGCTGTGCCAAGTTCTCCCCTGACGGGCGGCTCATCGTGTCTGCCAGTGATGACAAGACTGTCAAGCTGTGGG  517

Query  389  ACAAGAGCAGCCGGGAATGTGTCCACTCGTATTGTGAGCATGGCGGCTTTGTCACCTATGTGGACTTCCACCCC  462
            ||||||.|||||||||||||.|||||||.||.||||||||.|||||.|||||||||||.|||||||||||||||
Sbjct  518  ACAAGACCAGCCGGGAATGTATCCACTCATACTGTGAGCACGGCGGTTTTGTCACCTACGTGGACTTCCACCCC  591

Query  463  AGTGGGACGTGCATTGCCGCTGCCGGCATGGACAACACAGTGAAGGTGTGGGACGTGCGGACTCACCGGCTGCT  536
            |||||.||.||||||||.||||||||||||||||||||.||||||||||||||.|.|||||||||.||||||.|
Sbjct  592  AGTGGTACCTGCATTGCTGCTGCCGGCATGGACAACACGGTGAAGGTGTGGGATGCGCGGACTCATCGGCTGTT  665

Query  537  GCAGCATTATCAGTTGCACAGTGCAGCAGTGAACGGGCTCTCTTTCCACCCGTCGGGAAACTACCTGATCACAG  610
            |||||||||||||||.|||||||||||.|||||.|..|||||.||||||||.||||||||||||||.|||||||
Sbjct  666  GCAGCATTATCAGTTACACAGTGCAGCCGTGAATGCCCTCTCCTTCCACCCATCGGGAAACTACCTCATCACAG  739

Query  611  CCTCCAGTGACTCAACCCTGAAGATCCTGGACCTGATGGAGGGCCGGCTGCTCTACACACTCCACGGGCATCAG  684
            ||||||||||||||||.||||||||||||||||||||||||||||||||||||||.||.|||||.|||||.|||
Sbjct  740  CCTCCAGTGACTCAACGCTGAAGATCCTGGACCTGATGGAGGGCCGGCTGCTCTATACGCTCCATGGGCACCAG  813

Query  685  GGACCAGCCACCACTGTTGCCTTTTCAAGAACGGGGGAGTATTTTGCTTCTGGAGGCTCTGATGAACAAGTGAT  758
            ||.||.||.|||||.|||||||||||||||||||||||||||||.||||||||||||||.|||||.||.|||||
Sbjct  814  GGGCCTGCTACCACCGTTGCCTTTTCAAGAACGGGGGAGTATTTCGCTTCTGGAGGCTCCGATGAGCAGGTGAT  887

Query  759  GGTTTGGAAGAGTAACTTTGATATTGTTGATCATGGAGAAGTCACGAAAGTGCCGAGGCCCCCAGCCACACTGG  832
            |||.|||||||||||||||||.|||||||||.|||||||   ||.|||.|..|.||||||||||.||   ||..
Sbjct  888  GGTCTGGAAGAGTAACTTTGACATTGTTGATTATGGAGA---CATGAAGGCACGGAGGCCCCCACCC---CTAA  955

Query  833  CCAGCTCCATGGGGAATCTGCCAGAAGTGGACTTCCCTGTCCCCCCAGGCAGAGGCAGGAGTGTGGAGTCTGTG  906
            |||||||        .||||   |||                 |.|.|||||||.|||||||.|||||||.||.
Sbjct  956  CCAGCTC--------TTCTG---GAA-----------------CTCTGGCAGAGACAGGAGTCTGGAGTCAGTT  1001

Query  907  CAGAGCCAGCCCCAGGAGCCCGTGAGTGTGCCCCAGACACTGACTAGCACGCTGGAGCACATTGTGGGCCAGCT  980
            ||..||.|||||||||||.||.|.||..||||.|||||||                                  
Sbjct 1002  CAAGGCGAGCCCCAGGAGTCCATCAGCATGCCTCAGACAC----------------------------------  1041

Query  981  GGATGTCCTCACTCAGACAGTCTCCATTCTGGAGCAGCGGTTGACACTGACAGAAGACAAGCTGAAGCAGTGTC  1054
                                                                                      
Sbjct 1042  --------------------------------------------------------------------------  1041

Query 1055  TGGAGAACCAGCAGCTAATCATGCAGAGAGCAACACCA  1092
                                                  
Sbjct 1042  --------------------------------------  1041