Nucleotide Global Alignment
Description
- Query:
- TRCN0000469605
- Subject:
- XR_001782060.1
- Aligned Length:
- 2904
- Identities:
- 1073
- Gaps:
- 1719
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CGGGCGCAGGCAGCAGGTGGGCGGGGTGCGGCGGGGTGCGTGAGGCGGGGCGGGGGGCTGCCGGCTGCTCTGGG 74
Query 1 --------------------------------ATGGACTTCAACATGAAGAAGCTGGCGTCGGACGCGGGCATC 42
||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GCCGGCGTGGCGGCCCTGCGTACGGGCGCGCCATGGACTTCAACATGAAGAAGCTGGCGTCGGACGCGGGCATC 148
Query 43 TTCTTCACCCGGGCGGTGCAGTTCACGGAGGAGAAATTTGGCCAGGCTGAGAAGACTGAGCTTGATGCCCACTT 116
||||||||.|||||||||||||||||.||||||||.||||||||||||||||||||.||||||||.||||||||
Sbjct 149 TTCTTCACTCGGGCGGTGCAGTTCACAGAGGAGAAGTTTGGCCAGGCTGAGAAGACGGAGCTTGACGCCCACTT 222
Query 117 TGAAAACCTTCTGGCCCGGGCAGACAGCACCAAGAACTGGACAGAGAAGATCTTGAGGCAGACAGAGGTGCTGC 190
|||||||||.||.||.||||||||||||||||||||||||||||||..||||.||||||||||.||||||||||
Sbjct 223 TGAAAACCTCCTAGCTCGGGCAGACAGCACCAAGAACTGGACAGAGCGGATCCTGAGGCAGACCGAGGTGCTGC 296
Query 191 TGCAGCCCAACCCCAGTGCCCGAGTGGAGGAGTTCCTGTATGAGAAGCTGGACAGGAAGGTCCCCTCAAGGGTC 264
|||||||||||||||||||.|||||||||||||||||.|||||||||||||||||.|||||.|||||.||.|||
Sbjct 297 TGCAGCCCAACCCCAGTGCTCGAGTGGAGGAGTTCCTATATGAGAAGCTGGACAGAAAGGTGCCCTCGAGAGTC 370
Query 265 ACCAACGGGGAGCTGCTGGCTCAGTACATGGCAGACGCGGCCAGTGAGCTGGGGCCGACCACCCCCTATGGGAA 338
|||||.||||||||||||||||||||||||||.||.||.|||||.||||||||.||.|.|||.|||||.|||||
Sbjct 371 ACCAATGGGGAGCTGCTGGCTCAGTACATGGCGGAGGCAGCCAGCGAGCTGGGCCCCAGCACTCCCTACGGGAA 444
Query 339 GACACTGATCAAGGTGGCAGAAGCTGAAAAGCAACTGGGAGCCGCGGAGAGGGATTTTATCCACACGGCCTCCA 412
|||.||||||||||||.||||||||||.||||..||.|||||.||.|||.|||||||.||.|||||.||||||.
Sbjct 445 GACGCTGATCAAGGTGTCAGAAGCTGAGAAGCGCCTCGGAGCAGCAGAGCGGGATTTCATTCACACTGCCTCCC 518
Query 413 TCAGCTTCCTCACACCCTTGCGCAACTTCCTGGAGGGGGACTGGAAGACCATCTCGAAGGAGAGGCGGCTCCTC 486
|||||||||||||||||.||||.||||||||.||||||||||||||.||.||.||||||||||||||||||||.
Sbjct 519 TCAGCTTCCTCACACCCCTGCGGAACTTCCTAGAGGGGGACTGGAAAACGATTTCGAAGGAGAGGCGGCTCCTG 592
Query 487 CAAAACCGGCGTCTGGACTTGGATGCCTGCAAAGCGAGGCTGAAGAAGGCCAAGGCTGCAGAAGCCAAAGCCAC 560
||.|||||||||||.|||.||||||||||||||||..||||.||||||||||||||.||.||||||||||||||
Sbjct 593 CAGAACCGGCGTCTTGACCTGGATGCCTGCAAAGCCCGGCTAAAGAAGGCCAAGGCAGCCGAAGCCAAAGCCAC 666
Query 561 G------------ACGGTGCCTGACTTTCAGGAGACTAGACCTCGTAATTACATTCTCTCGGCCAGCGCCTCCG 622
| ||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||
Sbjct 667 GTGTGAGGGCGATACGGTGCCTGACTTTCAGGAGACTAGACCTCGTAATTACATTCTATCGGCCAGCGCCTCCG 740
Query 623 C------------------------------------------------------------------------- 623
|
Sbjct 741 CGGTAAGCAACCCTCCTGCCATTCCTTGCCCCACCCTGGCCTCCTTGGCCCACAGCTCTTGTCACTGGCTCTGC 814
Query 624 -------------------------------------------------------------------------- 623
Sbjct 815 CAGCGCAGAACCAGAAGACAGCAGGTGAGGCAAAGGGTCCTGCTCATGTTGCAGGTTGCCCTGAGGGGCTGAGG 888
Query 624 -------------------------------------------------------------------------- 623
Sbjct 889 TGCAGCTCAGAACAGGGAAGTGACAACTCCATGTGGCCCTGTCTGGTCCAGCAGGCAGGCTGGACTGGCTTCTC 962
Query 624 -------------------------------------------------------------------------- 623
Sbjct 963 CCTAGGCAAGGTAGAAGATATTTTGACTAGCTGTCCAGAAAAACCCCTTCGTGTCCTTAGGACAGCACAGTACC 1036
Query 624 -------------------------------------------------------------------------- 623
Sbjct 1037 ACCTCTAGGGAACCTGAGGAAATTTCCATTCTGCACTTTCTCCCACAAAGTCACAGCACTCCAGCCTCCTTATG 1110
Query 624 -------------------------------------------------------------------------- 623
Sbjct 1111 GGTCTGGGGGGACCCTGAGGAAAGAGGGGGGCCGCCTAGGTCTGGCTTCCTGTCTCAGACTCTTGCCTTAGCAC 1184
Query 624 -------------------------------------------------------------------------- 623
Sbjct 1185 CATGGTAGGTTGCAAACTAGATGGCCTCGGAAGCTCCTGGAAAGCAGGTGGGAGGTCAGCCTGAGGAGCAGGTC 1258
Query 624 -------------------------------------------------------------------------- 623
Sbjct 1259 AGAGGTAAGATGGAGGAAGGCAGGCTAGGCTGGCAGAGTAGACTGGTTGAGTTAGTAGGTGTCTATTGACTGTG 1332
Query 624 -------------------------------------------------------------------------- 623
Sbjct 1333 GGGGGTTGGCCAGCCACACCTCTCACCCTATGCCCTGGGTGAAACTCCCGCACAGGCCATCTGACCCCTCTGCT 1406
Query 624 -------------------------------------------------------------------------- 623
Sbjct 1407 CCTCTTCTGAGCATGCCACTGTGTGATTTGTGCTGTCATTCCATGGCTGGCCATTGTCTTTGAGATGTCAATGC 1480
Query 624 -------------------------------------------------------------------------- 623
Sbjct 1481 TCTGGCCTGTTAACTAGCCCTCCAACAGGGCACACGACAATGGTGCTCACTGTGGGCTGTGCATTCTGCTGGCC 1554
Query 624 -------------------------------------------------------------------------- 623
Sbjct 1555 CAGTTCAACTGTCCATGTGTCAGGGTGTTGTCCTAGGCCAGATTTCCACAAATGACCATAAACTGGGTCTCCTA 1628
Query 624 -------------------------------------------------------------------------- 623
Sbjct 1629 AGTCATGGTGGGGGGAGGGGGGCTTTTCTTCCCTAGACTCTGGATGACACTTCCCGCTCCCCTCCCTGGGCCGA 1702
Query 624 -------------------------------------------------------------------------- 623
Sbjct 1703 GTGGAAGGAGAAACATCCCGGAGGGTGGAGGCTGCCCTGTTTTTTTCTTTTGCCACTGACCCCAAGTGTGACTC 1776
Query 624 -------------------------------------GCTCTGGAATGATGAAGTGGACAAGGCCGAGCAGGAG 660
|||.|||||.||||||||.||||||||.|||||||||
Sbjct 1777 TGGCCCGAGGCTGCCTTCCTCTGCCGGAGGACAGAAAGCTTTGGAACGATGAAGTCGACAAGGCTGAGCAGGAG 1850
Query 661 CTCCGCGTGGCCCAGACAGAGTTTGACCGGCAAGCAGAAGTGACCCGTCTCTTGCTGGAGGGAATCAGTAGCAC 734
||.||.|||||.||||||||||||||||||||.||||||||||||||||||.||||||||||.|||||.||.||
Sbjct 1851 CTTCGAGTGGCGCAGACAGAGTTTGACCGGCAGGCAGAAGTGACCCGTCTCCTGCTGGAGGGGATCAGCAGTAC 1924
Query 735 TCACGTGAACCACCTGCGCTGCCTCCACGAGTTCGTCAAGTCTCAGACAACCTACTACGCACAGTGCTACCGCC 808
|||.|||||||||||.|||||||||||.|||||||||||||||||||||||||||||.||||||||||||||||
Sbjct 1925 TCATGTGAACCACCTTCGCTGCCTCCATGAGTTCGTCAAGTCTCAGACAACCTACTATGCACAGTGCTACCGCC 1998
Query 809 ACATGCTGGACTTGCAGAAGCAGCTGGGCAG---------------ATTTCCCGGCACCTTCGTGGGCACCACA 867
||||||||||..|||||||.|||||.||||| ||||||.|||||||||||||||||||||
Sbjct 1999 ACATGCTGGATCTGCAGAAACAGCTAGGCAGCTCCCAGGGTGCCATATTTCCAGGCACCTTCGTGGGCACCACA 2072
Query 868 GAGCCCGCCTCCCCACCCCTGAGCAGCACCTCACCCACCACTGCTGCGGCCACTATGCCTGTGGTGCCCTCTGT 941
|||||.|||||||||||||||||||||||||||||.|||||..||||||||||.|||||||||||.||..|||.
Sbjct 2073 GAGCCTGCCTCCCCACCCCTGAGCAGCACCTCACCTACCACCACTGCGGCCACCATGCCTGTGGTACCTACTGG 2146
Query 942 GGCCAGCCTGGCCCCTCCAGGGGAGGCCTCGCTCTGCCTGGAAGAGGTGGCCCCCCCTGCCAGTGGGACCCGCA 1015
|||...|.||||||||||||..|||||..|.|||||||||||.||||||||.|||||.|||||||||||.||.|
Sbjct 2147 GGCTGTCTTGGCCCCTCCAGAAGAGGCAGCCCTCTGCCTGGAGGAGGTGGCTCCCCCAGCCAGTGGGACTCGAA 2220
Query 1016 AAGCTCGGGTGCTCTATGACTACGAGGCAGCCGACAGCAGTGAGCTGGCCCTGCTGGCTGATGAGCTCATCACT 1089
|.||.|||||||||||.||||||||||||||.||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 AGGCCCGGGTGCTCTACGACTACGAGGCAGCTGACAGCAGTGAGCTGGCCCTGCTGGCTGATGAGCTCATCACT 2294
Query 1090 GTCTACAGCCTGCCTGGCATGGACCCTGACTGGCTCATTGGCGAGAGAGGCAACAAGAAGGGCAAGGTCCCTGT 1163
||||||||||||||.||||||||.||.||||||||||||||.||||||||||||||||||||||||||.|||||
Sbjct 2295 GTCTACAGCCTGCCAGGCATGGATCCCGACTGGCTCATTGGTGAGAGAGGCAACAAGAAGGGCAAGGTTCCTGT 2368
Query 1164 CACCTACTTGGAACTGCTCAGC---------------------------------------------------- 1185
|||||||.|||||||.||||||
Sbjct 2369 CACCTACCTGGAACTTCTCAGCTAAGCAGCCCCTTCCCAGGCTCTGCCACTTAGAGTCGTCTGCTGGCCACAGA 2442
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 2443 GCTGCTTAGGATAAGGGACCTAACCCTTTTCTGGCTGTGCCCGTCATTCAGCTATTAAAGAGCCCACAAGACAG 2516
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 2517 AATGGCCCCAGGCCCCTCTGCTAGTCCTGCTTCTGACCTGCAACCCTGCACACCCCAGGCTTCCCAGCTCCCTT 2590
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 2591 AAGGCAGAAGGGTCACTACATTTGACACCACCATGGGCCCAGGATATGCTGGGGATGGATGCTCTTGGCATGAA 2664
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 2665 AGAACATCTGCCTTCTGGCTGTGGAAGGTTGAGGGGGACAGCAGCACACAGGCAGGGCTAGGAGTGTGGCAGGA 2738
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 2739 AACCAGAAGGGTCAGCCAGAGCAGCAGCACCAAGTGCTGCCTCCCACTTCCCTCATGGCTCTGGCTGGGCACAG 2812
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 2813 TGGCTACAGCAGTCATTCCTTCAGTTTCTAACTAACATTCTGACCTCTGCCTGTCTGCTTGCTCTCTGGCAAAT 2886
Query 1186 ------------------ 1185
Sbjct 2887 AAATCCTTTGTGTGCGAA 2904
