Nucleotide Global Alignment
Description
- Query:
- TRCN0000469627
- Subject:
- NM_001161837.1
- Aligned Length:
- 1652
- Identities:
- 1086
- Gaps:
- 421
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCATCGCAACACTCGGTCAGTTTCCACACCGACACTGCAAATGGATATAACCAAGCTGAACATAACCCTGCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCGGATCTTCCGCCAAGGAGTAGCTGCAGCCCTGGGACTCTTACCTCAGCAAGTGCACATTAACCGGCTCATTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AAAAGAAGAACCAGGTTGAGTTGTTTGTGTCTCCCGGAAACCGGAAACCAGGAGAAACGCAGGCCCTGCAGGCT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GAGGAAGTGCTGCGTTCCCTCAATGTGGATGGTTTGCATCAGAGTTTACCACAGTTTGGAATTACAGACGTCGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCCTGAGAAAAATGTTTTACAAGGGCAGCACGAAGCAGACAAGATCTGGAGCAAAGAAGGATTTTACGCTGTCG 370
Query 1 -----------------------------------------ATGATTCTTCACAGATTAAAAGAAAGATTTCAG 33
||||||.||.||||.|||||||||||..|||||
Sbjct 371 TCATCTTCCTCAGCATCTTTATCATCATAGTAACCTGTTTGATGATTATTTACAGGTTAAAAGAAAGGCTTCAG 444
Query 34 CTTTCCTTAAGACAAGACAAAGAGAAAAACCAGGAGATCCACCTATCGCCCATCACATTACAGCCAGCACTGTC 107
|||||||||||||||||.|||||||||||||||||||||||||||||.|||||..||...||||.|||||..||
Sbjct 445 CTTTCCTTAAGACAAGATAAAGAGAAAAACCAGGAGATCCACCTATCACCCATTGCACGGCAGCAAGCACAATC 518
Query 108 CGAGGCAAAGACAGTCCACAGCATGGTCCAACCTGAGCAGGCCCCAAAGGTACTGAATGTTGTCGTGGACCCTC 181
.|||||.|||||...|||||||||||||||.||.||.|||||.||||||||.|||||.||.||.||||||||||
Sbjct 519 GGAGGCCAAGACGACCCACAGCATGGTCCAGCCCGATCAGGCGCCAAAGGTGCTGAACGTGGTTGTGGACCCTC 592
Query 182 AAGGCCGAGGTGCTCCTGAGA-TCAAAGCTACCACCGCTACCTCTGTTTGCCCTTCTCCTTTCAAAATGAAGCC 254
||||||.|.|..||||||||| ||.||.| |.||||.|.||||||||.|||||||||||.||||.|||||||||
Sbjct 593 AAGGCCAATGCACTCCTGAGATTCGAAAC-AGCACCTCCACCTCTGTCTGCCCTTCTCCCTTCAGAATGAAGCC 665
Query 255 CATAGGACTTCAAAAGAGAAGAGGGTCCAACGTATCTCTTACATTGGACATGAGTAGCTTGGGGAACATTGAAC 328
|||||||||.||..||.||.||||.|||||.|||||||||||..||||||||||||||.||||.|...|.||||
Sbjct 666 CATAGGACTCCAGGAGCGACGAGGTTCCAATGTATCTCTTACGCTGGACATGAGTAGCCTGGGCAGTGTGGAAC 739
Query 329 CCTTTGT----GTCTATACCAACACCACGGGAGAAGGTAGCAATGGAGTATCTGCAGTCAGCCAGCCGAATTCT 398
||||||| |||| ||||.||.||||||||||||||.|||||.||.||||||||||||||||||.||||
Sbjct 740 CCTTTGTGGCCGTCT----CAACCCCCCGGGAGAAGGTAGCCATGGAATACCTGCAGTCAGCCAGCCGAGTTCT 809
Query 399 CACAAGGTCTCAGCTGAGGGACGTCGTGGCAAGTTCACATTTACTCCAAAGTGAATTCATGGAAATACCAATGA 472
||||.||||.||||||||||||||||||||||||||.||..||||.||||||||||||||||||||||||||||
Sbjct 810 CACACGGTCACAGCTGAGGGACGTCGTGGCAAGTTCCCACCTACTTCAAAGTGAATTCATGGAAATACCAATGA 883
Query 473 ACTTTGTGGATCCCAAAGAAATTGATATTCCGCGTCATGGAACTAAAAATCGCTATAAGACCATTTTACCAAAT 546
|.|||||||||||||||||||||||||||||.|||||.||||||||||||||.||||||||||||||.||||||
Sbjct 884 ATTTTGTGGATCCCAAAGAAATTGATATTCCACGTCACGGAACTAAAAATCGTTATAAGACCATTTTGCCAAAT 957
Query 547 CCCCTCAGCAGAGTGTGTTTAAGACCAAAAAATGTAACCGATTCATTGAGCACCTACATTAATGCTAATTATAT 620
|||||||||||||||||.|||||||||||||||.||||||||||.|||||.||.|||||.||||||||.|||||
Sbjct 958 CCCCTCAGCAGAGTGTGCTTAAGACCAAAAAATATAACCGATTCCTTGAGTACTTACATAAATGCTAACTATAT 1031
Query 621 TAGGGGCTACAGTGGCAAGGAGAAAGCCTTCATTGCCACGCAGGGCCCCATGATCAACACCGTGGATGATTTCT 694
|.|||||||||||||.|||||||||||||||||||||||.||||||||||||||||||||.|||.||||.||||
Sbjct 1032 TCGGGGCTACAGTGGTAAGGAGAAAGCCTTCATTGCCACCCAGGGCCCCATGATCAACACTGTGAATGACTTCT 1105
Query 695 GGCAGATGGTTTGGCAGGAAGACAGCCCTGTGATTGTTATGATCACAAAACTCAAAGAAAAAAATGAGAAATGT 768
||||||||||.|||||.||||||||.||.||||||||.||||||||.|||||||||||.|||||||||||||||
Sbjct 1106 GGCAGATGGTGTGGCAAGAAGACAGTCCCGTGATTGTGATGATCACGAAACTCAAAGAGAAAAATGAGAAATGT 1179
Query 769 GTGCTATACTGGCCGGAAAAGAGAGGGATATATGGAAAAGTTGAGGTTCTGGTTATCAGTGTAAATGAATGTGA 842
|||||.||||||||.||||||||||||||.||.||.||.||||||||||||||.|.|.||||.|..||||||||
Sbjct 1180 GTGCTCTACTGGCCAGAAAAGAGAGGGATTTACGGCAAGGTTGAGGTTCTGGTCACCGGTGTGACCGAATGTGA 1253
Query 843 TAACTACACCATTCGAAACCTTGTCTTAAAGCAAGGAAGCCACACCCAACATGTGAAGCATTACTGGTACACCT 916
||||||||||||.||.|||||.|||||||||||||||||.||||||||||||||||||||.|||||||||||.|
Sbjct 1254 TAACTACACCATCCGCAACCTCGTCTTAAAGCAAGGAAGTCACACCCAACATGTGAAGCACTACTGGTACACTT 1327
Query 917 CATGGCCTGATCACAAGACTCCAGACAGTGCCCAGCCCCTCCTACAGCTCATGCTGGATGTAGAAGAAGACAGA 990
|||||||.|||||.||||||||||||||||||||||||||.||.|||||||||.|||||||.||||||||||||
Sbjct 1328 CATGGCCGGATCATAAGACTCCAGACAGTGCCCAGCCCCTTCTGCAGCTCATGTTGGATGTGGAAGAAGACAGA 1401
Query 991 CTTGCTTCCCAGGGCCGAGGGCCTGTGGTTGTCCACTGCAGTGCAGGAATAGGTAGAACAGGGTGTTTTATTGC 1064
||.||.||..|.||||||||||||||||||||||||||||||||.||.||.||.|||||.||||||||.||.||
Sbjct 1402 CTGGCCTCTGAAGGCCGAGGGCCTGTGGTTGTCCACTGCAGTGCGGGGATTGGGAGAACTGGGTGTTTCATCGC 1475
Query 1065 TACATCCATTGGCTGTCAACAGCTGAAAGAAGAAGGAGTTGTGGATGCACTAAGCATTGTCTGCCAGCTTCGTA 1138
|||||||||||||||||||||..|||||||||||||||||||.||.||||||||.||||||||||||||||||.
Sbjct 1476 TACATCCATTGGCTGTCAACAATTGAAAGAAGAAGGAGTTGTAGACGCACTAAGTATTGTCTGCCAGCTTCGTG 1549
Query 1139 TGGATAGAGGTGGAATGGTGCAAACCAGTGAGCAGTATGAATTTGTGCACCATGCTCTGTGCCTGTATGAGAGC 1212
|.||.||.|||||.|||||.||||||||.|||||||||||||||||||||||||||||||||||||..||||||
Sbjct 1550 TAGACAGGGGTGGTATGGTCCAAACCAGCGAGCAGTATGAATTTGTGCACCATGCTCTGTGCCTGTTCGAGAGC 1623
Query 1213 AGACTTTCAGCAGAGACTGTCCAG 1236
|||||||||.||||.||||||.||
Sbjct 1624 AGACTTTCACCAGAAACTGTCGAG 1647
