Nucleotide Global Alignment
Description
- Query:
- TRCN0000469727
- Subject:
- XR_931276.1
- Aligned Length:
- 1700
- Identities:
- 645
- Gaps:
- 1000
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGGCCTTTTCCTTCTACTCAAGACAGTGAGATGGGAAAACTGAATTCCAGACCTAACTGTCACCAACGGGACCA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ATGACCGAGGGCAACATTACATGTAGTCACATTTGCAAGATGGGAGACCTGGAGTTCTGGAGTTCTGGACTAGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCTGGCAACCTGGATTCTGCATACCTGATTAGGTCTATAAAATGTCCTCAGGCATATAAAATCCGTGCATTAGA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGTCAATTCTCGAAAGTCAAAACATCATATAGGACTTTTGCTGACCAAAAACTAAAGGCTTCTGAGCAAGATCA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCATTTGGAGACAGACTTATCTAAAGAAAGAAAAGAGACTTCTTTTCTAGCCAAGATGAAAGATACACAAGACA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TTCAGGAAGCTTCGAAGGCAATGCAGAATAAAGTCCATGAGCAGGAAGATAAGAATGAGAAACAAAAACAAAGA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GAAGACAAACTTGGAGTATATTCTTTAGTACATTTTTCCCCAAAGATGTTGGGTTCAGTTGCCACAACACTGCC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ATTGTCATCTTCAAATTCCAGTGGAATGCCTCTTGGTTACTATCTGTCTAGTCCTCAGATTAGTAGAGTAACTA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TATCAACAACTGGACAATTGACTTCTAAAGCTACTGTAGGTAGCTGTTCCAGAGTGGAAAACAGCTTGGATGCC 666
Query 1 ---------------------------------------ATGATTGGGGATGGAGAAGATTATTTCCTTTCTTT 35
|||||||||||||||||||||||||||||||||||
Sbjct 667 AGCCCCTTCTCAGTTCCGAAGAAACAGGATGAATCACCCATGATTGGGGATGGAGAAGATTATTTCCTTTCTTT 740
Query 36 GTTTGGTGATTCAAAGAAACTTACAGCACACTCAAACTACACTCAGAAAACTTTAAAATACTTTTCTATGATTC 109
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GTTTGGTGATTCAAAGAAACTTACAGCACACTCAAACTACACTCAGAAAACTTTAAAATACTTTTCTATGATTC 814
Query 110 TTGAAGAAGTTGGCCAATTTACCTCCAGTTCTCTTGGAGATGTTGAAATAGCTGAAGTGAATGTCAAGGGTTTG 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TTGAAGAAGTTGGCCAATTTACCTCCAGTTCTCTTGGAGATGTTGAAATAGCTGAAGTGAATGTCAAGGGTTTG 888
Query 184 TTCGTGAAGCTCATTAACTCTTCCCTTGACAAAGAAATGGCAATTGGAGATCATATTCTCCAGCAAAATGTGAA 257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 TTCGTGAAGCTCATTAACTCTTCCCTTGACAAAGAAATGGCAATTGGAGATCATATTCTCCAGCAAAATGTGAA 962
Query 258 TGGACAAACCATTTCTTTGTACCGATTCCTTCCAAACATCGTAATGCAGGCAAATTCCACAGTAACAGTGTGGG 331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 TGGACAAACCATTTCTTTGTACCGATTCCTTCCAAACATCGTAATGCAGGCAAATTCCACAGTAACAGTGTGGG 1036
Query 332 CAGCAGCATCTGAAGCAAAGCATCAACCTCCATCAGATTTTCTTTGGAAGGAACAAGACAAGTTTAGAGCAAGT 405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 CAGCAGCATCTGAAGCAAAGCATCAACCTCCATCAGATTTTCTTTGGAAGGAACAAGACAAGTTTAGAGCAAGT 1110
Query 406 CCTGATTGTATAACAATCCTGTGCAAACCGAACGGTCAAGCCATTGCGTGGTACACCCCTATCCACTGGAAGCA 479
|||||||||||||||||||||||||||||||||||||||.|..|| ||| ||.||||
Sbjct 1111 CCTGATTGTATAACAATCCTGTGCAAACCGAACGGTCAATCGTTT---TGG----------------GGGAGCA 1165
Query 480 AGCG-----TGGGAAAAATTAGAT-GCTGAC---GTTG---AATTTAACAG-ATGTTCAGTAGTATCTCCAA-- 538
.|.| ||| |||.|| |.|.|| |||| |||..||.|| | .|||.|||| ||| .||
Sbjct 1166 TGTGGTGTTTGG------TTACATGGATAACCATGTTGTCAAATGGAAGAGCA--CTCATTAGT-TCT-TAAGT 1229
Query 539 -----CATTCCGAAAGCGTGTGTTTCAGTGGA-----CAGCATCTACA-GCTACAATAACTAAAGAAAAACAAG 601
.||||| |.||.|| ||| ||.|| |||.| ||.||||.|..|.|.|.|||.|||.
Sbjct 1230 GGTGGTATTCC--ATGCTTG---------GGAAGAACCATCA-CTAAATGCCACAACACATCAGGCAAATCAAC 1291
Query 602 A-----------------TCAA----CCTAAGA---------AA------------------GATATCTCAAAT 627
| |||| ||.|||| || |||||||||.||
Sbjct 1292 AGCATTCTCTTCCCAATGTCAAAGGGCCCAAGAGTTACTTACAATTTGGCAAAAATAATTTTGATATCTCATAT 1365
Query 628 T-ATCAGGTGGAACAAG-CTCAAGTTCTTCTTAAGAGAGAGAAGGAAATCCCACCAACCGTTTTCCCTAATCGC 699
| .| ||.||| ||| |||..|||..|| ||..||||.|| |.|| ||||
Sbjct 1366 TCCT-------AAGAAGCCTC---TTCAACTTTCGA-AGTCAAGGGAA-----------GATT----TAAT--- 1410
Query 700 AGCCCTTG------------------GTGCCA----GAATCCCTATGTCTCTGC-----ACATCCTTACTGTCC 746
||| |||..| |||..|| || ||| |||.|| ||.|||
Sbjct 1411 -----TTGTGATATTTAGCCTGAAGAGTGGGATAAGGAAGGCC-AT-----TGCGTGGTACACCC---CTATCC 1470
Query 747 TCTGATTGAACCA--------CACAATACATCCACCGCTGGAGGCAGA--TTGGAT-----AGA----CAGCCC 801
.||| |||.|| .|.||| |.||.||.|| |||.|| ||| |||
Sbjct 1471 ACTG---GAAGCAAGCGTGGGAAAAAT-----------TAGATGCTGACGTTGAATTTAACAGATGTTCAG--- 1527
Query 802 AGGTCTCGGTCAACCAGACCTAATCGAGCCTCAGGGTCTAAGAAAAAGAAGACATCTGAGTCACAAAAGCAA 873
Sbjct 1528 ------------------------------------------------------------------------ 1527
