Nucleotide Global Alignment
Description
- Query:
- TRCN0000469746
- Subject:
- NR_028460.2
- Aligned Length:
- 6313
- Identities:
- 245
- Gaps:
- 6031
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTGGGGGCCGTTGGCTCCAGACAAATAAACATGGAGTCCATCTTCCACGAGAAACAAGAAGGCTCACTTTGTGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCAACATTGCCTGAATAACTTATTGCAAGGAGAATATTTTAGCCCTGTGGAATTATCCTCAATTGCACATCAGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGGATGAGGAGGAGAGGATGAGAATGGCAGAAGGAGGAGTTACTAGTGAAGATTATCGCACGTTTTTACAGCAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCTTCTGGAAATATGGATGACAGTGGTTTTTTCTCTATTCAGAAATGAAAGATCATTTATATGCAATTATAAGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AACACTGGTTTACAGTTAGAAAATTAGGAAAACAGACAGCAGCAAAAGCAGCAACAGCAGCAGCAGCAGCAGCA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCAGGGGGACCTATCAGGACAGAGTTCACATCCATGTGAAAGGCCAGCCACCAGTTCAGGAGCACTTGGGAGTG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ATCTAGGTGATGCTATGAGTGAAGAAGACATGCTTCAGGCAGCTGTGACCATGTCTTTAGAAACTGTCAGAAAT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GATTTGAAAACAGAAGGAAAAAAATAATACCTTTAAAAAATAATTTAGATATTCATACTTTCCAACATTATCCT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GTGTGATTACAGCATAGGGTCCACTTTGGTAATGTGTCAAAGAGATGAGGAAATAAGACTTTTAGCGGTTTGCA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AACAAAATGATGGGAAAGTGGAACAATGCGTCGGTTGTAGGACTAAATAATGATCTTCCAAATATTAGCCAAAG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AGGCATTCAGCAATTAAAGACATTTAAAATAGTTTTCTAAATGTTTCTTTTTCTTTTTTGAGTGTGCAATATGT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AACATGTCTAAAGTTAGGGCATTTTTCTTGGATCTTTTTGCAGACTAGCTAATTAGCTCTCGCCTCAGGCTTTT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TCCATATAGTTTGTTTTCTTTTTCTGTCTTGTAGGTAAGTTGGCTCACATCATGTAATAGTGGCTTTCATTTCT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TATTAACCAAATTAACCTTTCAGGAAAGTATCTCTACTTTCCTGATGTTGATAATAGTAATGGTTCTAGAAGGA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TGAACAGTTCTCCCTTCAACTGTATACCGTGTGCTCCAGTGTTTTCTTGTGTTGTTTTCTCTGATCACAACTTT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TCTGCTACCTGGTTTTCATTATTTTCCCACAATTCTTTTGAAAGATGGTAATCTTTTCTGAGGTTTAGCGTTTT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AAGCCCTACGATGGGATCATTATTTCATGACTGGTGCGTTCCTAAACTCTGAAATCAGCCTTGCACAAGTACTT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GAGAATAAATGAGCATTTTTTAAAATGTGTGAGCATGTGCTTTCCCAGATGCTTTATGAATGTCTTTTCACTTA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TATCAAAACCTTACAGCTTTGTTGCAACCCCTTCTTCCTGCGCCTTATTTTTTCCTTTCTTCTCCAATTGAGAA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AACTAGGAGAAGCATAGTATGCAGGCAAGTCTCCTTCTGTTAGAAGACTAAACATACGTACCCACCATGAATGT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 ATGATACATGAAATTTGGCCTTCAATTTTAATAGCAGTTTTATTTTATTTTTTCTCCTATGACTGGAGCTTTGT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GTTCTCTTTACAGTTGAGTCATGGAATGTAGGTGTCTGCTTCACATCTTTTAGTAGGTATAGCTTGTCAAAGAT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GGTGATCTGGAACATGAAAATAATTTACTAATGAAAATATGTTTAAATTTATACTGTGATTTGACACTTGCATC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 ATGTTTAGATAGCTTAAGAACAATGGAAGTCACAGTACTTAGTGGATCTATAAATAAGAAAGTCCATAGTTTTG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 ATAAATATTCTCTTTAATTGAGATGTACAGAGAGTTTCTTGCTGGGTCAATAGGATAGTATCATTTTGGTGAAA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 ACCATGTCTCTGAAATTGATGTTTTAGTTTCAGTGTTCCCTATCCCTCATTCTCCATCTCCTTTTGAAGCTCTT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TTGAATGTTGAATTGTTCATAAGCTAAAATCCAAGAAATTTCAGCTGACAACTTCGAAAATTATAATATGGTAT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 ATTGCCCTCCTGGTGTGTGGCTGCACACATTTTATCAGGGAAAGTTTTTTGATCTAGGATTTATTGCTAACTAA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CTGAAAAGAGAAGAAAAAATATCTTTTATTTATGATTATAAAATAGCTTTTTCTTCGATATAACAGATTTTTTA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 AGTCATTATTTTGTGCCAATCAGTTTTCTGAAGTTTCCCTTACACAAAAGGATAGCTTTATTTTAAAATCTAAA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GTTTCTTTTAATAGTTAAAAATGTTTCAGAAGAATTATAAAACTTTAAAACTGCAAGGGATGTTGGAGTTTAGT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 ACTACTCCCTCAAGATTTAAAAAGCTAAATATTTTAAGACTGAACATTTATGTTAATTATTACCAGTGTGTTTG 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TCATATTTTCCATGGATATTTGTTCATTACCTTTTTCCATTGAAAAGTTACATTAAACTTTTCATACACTTGAA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 TTGATGAGCTACCTAATATAAAAATGAGAAAACCAATATGCATTTTAAAGTTTTAACTTTAGAGTTTATAAAGT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TCATATATACCCTAGTTAAAGCACTTAAGAAAATATGGCATGTTTGACTTTTAGTTCCTAGAGAGTTTTTGTTT 2590
Query 1 ---------------------ATGGAGTCTTGCTCTGTCACCCAGGCTGGAGTGCAATGGCGCGATCTCCACTC 53
|.|||||||||||.||||.||||||||||||.|||.||||..||||||..|||
Sbjct 2591 TTGTTTTTGTTTTTTTTTGAGACGGAGTCTTGCTATGTCTCCCAGGCTGGAGGGCAGTGGCATGATCTCGGCTC 2664
Query 54 ACTGCAACCTCTGCGTACCAGGTTCAAGCGATTCTCCTGTCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCC 127
|||.||||.||..|.|.||.|||||||||.|||||||||.||||||||||.|||||||||||||||||||.|||
Sbjct 2665 ACTACAACTTCCACCTCCCGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCGCC 2738
Query 128 CACCACCACAGCTGGCTAATTTTTGTATTTTTAGTAGAGACTGGGTTTTACCAT-ATTGGCCAGACTGGTCTCG 200
||||||||||.|.|||..||||||||||||||.||||||||..|||||.|.||| .||||||||.|||||||||
Sbjct 2739 CACCACCACACCCGGCAGATTTTTGTATTTTTGGTAGAGACGCGGTTTCATCATGTTTGGCCAGGCTGGTCTCG 2812
Query 201 AACTCCTGACCTCAGGTGGTCCGCCTGCCTTGGCTTCCCAAAGTGCTGGGATTATAGGAGTGAGCCACTGCGCC 274
||||||||||||||||||.|||||||||||||||.||||||||||.||||||||.|||..||||||||||||||
Sbjct 2813 AACTCCTGACCTCAGGTGATCCGCCTGCCTTGGCCTCCCAAAGTGTTGGGATTACAGGCATGAGCCACTGCGCC 2886
Query 275 TGGCCA---------TT--------------------------------------------------------- 282
|||||| ||
Sbjct 2887 TGGCCAGCTAGAGAGTTTTTAAAGCAGAGCTGAGCACACACTGGATGCGTTTGAATGTGTTTGTGTAGTTTGTT 2960
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2961 GTGAAATTGTTACATTTAGCAGGCAGATCCAGAAGCACTAGTGAACTGTCATCTTGGTGGGGTTGGCTTAAATT 3034
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3035 TAATTGACTGTTTAGATTCCATTTCTTAATTGATTGGCCAGTATGAAAAGATGCCAGTGCAAGTAACCATAGTA 3108
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3109 TCAAAAAAGTTAAAAATTATTCAAAGCTATAGTTTATACATCAGGTACTGCCATTTACTGTAAACCACCTGCAA 3182
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3183 GAAAGTCAGGAACAACTAAATTCACAAGAACTGTCCTGCTAAGAAGTGTATTAAAGATTTCCATTTTGTTTTAC 3256
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3257 TAATTGGGAACATCTTAATGTTTAATATTTAAACTATTGGTATCATTTTTCTAATGTATAATTTGTATTACTGG 3330
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3331 GATCAAGTATGTACAGTGGTGATGCTAGTAGAAGTTTAAGCCTTGGAAATACCACTTTCATATTTTCAGATGTC 3404
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3405 ATGGATTTAATGAGTAATTTATGTTTTTAAAATTCAGAATAGTTAATCTCTGATCTAAAACCATCAATCTATGT 3478
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3479 TTTTTACGGTAATCATGTAAATATTTCAGTAATATAAACTGTTTGAAAAGGCTGCTGCAGGTAAACTCTATACT 3552
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3553 AGGATCTTGGCCAAATAATTTACAATTCACAGAATATTTTATTTAAGGTGGTGCTTTTTTTTTTTGTCCTTAAA 3626
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3627 ACTTGATTTTTCTTAACTTTATTCATGATGCCAAAGTAAATGAGGAAAAAAACTCAAAACCAGTTGAGTATCAT 3700
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3701 TGCAGACAAAACTACCAGTAGTCCATATTGTTTAATATTAAGTTGAATAAAATAAATTTTATTTCAGTCAGAGC 3774
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3775 CTAAATCACATTTTGATTGTCTGAATTTTTGATACTATTTTTAAAATCATGCTAGTGGCGGCTGGGCGTGGTAG 3848
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3849 CTCACGCCTGTAATCCCAGCATTTTGGGAGGCCGAAGTGGGTGGATCACGAGGTCGGGAGTTCGAGACCAGCTT 3922
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3923 GGCCAAAATGGTGAAACCCCATCTGTACTAAAAACTACAAAAATTAGCTGGGCGCGGTGGCAGGTGCCTGTAAT 3996
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3997 CCCAGCTACCTGGGAGTCTGAGGCAGGAGAATTGCTTGAACCCTGGCGACAGAGGATGCAGTGAGCCAAGATGG 4070
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4071 TGCCACTGTACTCCAGACTGGGCGACAGAGTGAGACTCTGTCTCAAAAAAAAAAAAAAAATCATGCTAGTGCCA 4144
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4145 AGAGCTACTAAATTCTTAAAACCGGCCCATTGGACCTGTACAGATAAAAAATAGATTCAGTGCATAATCAAAAT 4218
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4219 ATGATAATTTTAAAATCTTAAGTAGAAAAATAAATCTTGATGTTTTAAATTCTTACGAGGATTCAATAGTTAAT 4292
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4293 ATTGATGATCTCCCGGCTGGGTGCAGTGGCTCACGCCTGTAATCCCAGCAGTTCTGGAGGCTGAGGTGGGCGAA 4366
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4367 TCACTTCAGGCCAGGAGTTCAAGACCAGTCTGGGCAACATGGTGAAACCTCGTTTCTACTAAAAATACAAAAAT 4440
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4441 TAGCCGGGCGTGGTTGCACACACTTGTAATCCCAGCTACTCAGGAGGCTAAGAATCGCATGAGCCTAGGAGGCA 4514
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4515 GAGGTTGCAGAGTGCCAAGGGCTCACCACTGCATTCCAGCCTGCCCAACAGAGTGAGACACTGTTTCTGAAAAA 4588
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4589 AAAAAATATATATATATATATATATATGTGTGTATATATATATGTATATATATATGACTTCCTATTAAAAACTT 4662
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4663 TATCCCAGTCGGGGGCAGTGGCTCACGCCTGTAATCCCAACACTTTGGGAGGCTGAGGCAGGTGGATCACCTGA 4736
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4737 AGTCCGGAGTTTGAGACCAGCCTGGCCAACATGGTGAAACCCCATCTCTACTAAAAATACAAAACTTAAGCCAG 4810
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4811 GTATGGTGGCGGGCACCTGTAATCCCAGTTACTTGGGAGGCTGAGGCAGGAGAATCGTTTAAACCCAGGAGGTG 4884
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4885 GAGGTTGCAGTGAGCTGAGATCGTGCCATTGCACTCTAGCCTGGGCAACAAGAGTAAAACTCCATCTTAAAGGT 4958
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4959 TTGTTTGTTTTTTTTTAATCCGGAAACGAAGAGGCGTTGGGCCGCTATTTTCTTTTTCTTTCTTTCTTTCTTTC 5032
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5033 TTTTTTTTTTTTTCTGAGACGGAGTCTAGCTCTGCTGCCCAGGCTGGAGTACAATGACACGATGTTGGCTCACT 5106
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5107 GCAACCTCCACCTCCTGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCAAGTACCTGGGATTACAGGCACCTGC 5180
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5181 CACTACACCTGGCGAATATTTGTTTTTTTTAGTAGAGACGGGCTTTTACCATGTTAGGCTGGTCTCAAACTCCT 5254
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5255 GACCTCAGGTGATCTGCCTGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGTGCAGGCCACCACACCCGGCCTT 5328
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5329 GGGCCACTGTTTTCAAAGTGAATTGTTTGTTGTATCGAGTCCTTAAGTATGGATATATATGTGACCCTAATTAA 5402
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5403 GAACTACCAGATTGGATCAACTAATCATGTCAGCAATGTAAATAACTTTATTTTTCATATTCAAAATAAAAACT 5476
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5477 TTCTTTTATTTCTGGCCCCTTTATAACCAGCATCTTTTTGCTTTAAAAAATGACCTGGCTTTGTATTTTTTTAG 5550
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5551 TCTTAAACATAATAAAAATATTTTTGTTCTAATTTGCTTTCATGAGTGAAGATTATTGACATCGTTGGTAAATT 5624
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5625 CTAGAATTTTGATTTTGTTTTTTAATTTGAAGAAAATCTTTGCTATTATTATTTTTTCCAAGTGGTCTGGCATT 5698
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5699 TTAAGAATTAGTGCTAATAACGTAACTTCTAAATTTGTCGTAATTGGCATGTTTAATAGCATATCAAAAAACAT 5772
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5773 TTTAAGCCTGTGGATTCATAGACAAAGCAATGAGAAACATTAGTAAAATATAAATGGATATTCCTGATGCATTT 5846
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5847 AGGAAGCTCTCAATTGTCTCTTGCATAGTTCAAGGAATGTTTTCTGAATTTTTTTAATGCTTTTTTTTTTTTTG 5920
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5921 AAAGAGGAAAACATACATTTTTAAATGTGATTATCTAATTTTTACAACACTGGGCTATTAGGAATAACTTTTTA 5994
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5995 AAAATTACTGTTCTGTATAAATATTTGAAATTCAAGTACAGAAAATATCTGAAACAAAAAGCATTGTTGTTTGG 6068
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6069 CCATGATACAAGTGCACTGTGGCAGTGCCGCTTGCTCAGGACCCAGCCCTGCAGCCCTTCTGTGTGTGCTCCCT 6142
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6143 CGTTAAGTTCATTTGCTGTTATTACACACACAGGCCTTCCTGTCTGGTCGTTAGAAAAGCCGGGCTTCCAAAGC 6216
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6217 ACTGTTGAACACAGGATTCTGTTGTTAGTGTGGATGTTCAATGAGTTGTATTTTAAATATCAAAGATTATTAAA 6290
Query 283 ----------------------- 282
Sbjct 6291 TAAAGATAATGTTTGCTTTTCTA 6313
