Construct: ORF TRCN0000469746

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF010901.1_s317c1
Derived from:
ccsbBroadEn_13781
DNA Barcode:
TCCCTGCGCCGTCCGGGTTTTCGA
Epitope Tag:
V5
Notes:
No stop codon in insert

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000469746
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 105371063 LOC105371063 putative uncharacterized pr... XM_011522781.1 70% 48.4% (many diffs)
2 human 725 C4BPB complement component 4 bind... XM_005273255.2 24.8% 11.7% (many diffs)
3 human 109729141 TDRKH-AS1 TDRKH antisense RNA 1 NR_146292.1 22.1% (many diffs)
4 human 171220 DSTNP2 DSTN pseudogene 2 NR_033796.2 21.5% (many diffs)
5 human 124801 LSM12 LSM12 homolog NM_001369484.1 21.4% 1.6% (many diffs)
6 human 104472718 LINC00508 long intergenic non-protein... NR_126452.2 19.6% 1_311del;379A>G;594_1428del
7 human 51642 MRPL48 mitochondrial ribosomal pro... NR_134661.2 18.6% (many diffs)
8 human 105369468 LOC105369468 uncharacterized LOC105369468 XR_001748360.1 18.5% (many diffs)
9 human 105373796 LOC105373796 uncharacterized LOC105373796 XR_001739151.1 17.3% (many diffs)
10 human 388325 SCIMP SLP adaptor and CSK interac... NM_001319190.1 17.2% 12.3% (many diffs)
11 human 105373796 LOC105373796 uncharacterized LOC105373796 XR_001739149.1 16.6% (many diffs)
12 human 51642 MRPL48 mitochondrial ribosomal pro... NR_134658.2 16.6% (many diffs)
13 human 7357 UGCG UDP-glucose ceramide glucos... XM_017015107.1 16.6% 14.2% (many diffs)
14 human 51642 MRPL48 mitochondrial ribosomal pro... NR_134660.2 15% (many diffs)
15 human 26238 LINC01558 long intergenic non-protein... NR_026773.1 14.8% (many diffs)
16 human 105373796 LOC105373796 uncharacterized LOC105373796 XR_001739150.1 14.6% (many diffs)
17 human 105375902 LOC105375902 uncharacterized LOC105375902 XR_001745955.1 14.5% (many diffs)
18 human 23029 RBM34 RNA binding motif protein 34 NR_144491.2 14.3% (many diffs)
19 human 23029 RBM34 RNA binding motif protein 34 NR_027762.3 14.3% (many diffs)
20 human 105369325 LOC105369325 uncharacterized LOC105369325 XR_950154.2 14.2% (many diffs)
21 human 51642 MRPL48 mitochondrial ribosomal pro... NR_134659.2 13.8% (many diffs)
22 human 100288254 LOC100288254 uncharacterized LOC100288254 NR_130933.1 13.4% (many diffs)
23 human 127018 LYPLAL1 lysophospholipase like 1 XR_001736966.2 12.9% (many diffs)
24 human 100128988 LOC100128988 uncharacterized LOC100128988 NR_145525.1 12.2% (many diffs)
25 human 11092 SPACA9 sperm acrosome associated 9 NR_133631.2 12.1% (many diffs)
26 human 23029 RBM34 RNA binding motif protein 34 NR_144492.2 12% (many diffs)
27 human 23029 RBM34 RNA binding motif protein 34 NR_144490.2 11.7% (many diffs)
28 human 100128988 LOC100128988 uncharacterized LOC100128988 NR_145524.1 11.6% (many diffs)
29 human 378108 TRIM74 tripartite motif containing 74 XR_001744735.1 11.2% (many diffs)
30 human 128989 TANGO2 transport and golgi organiz... XR_002958662.1 11% (many diffs)
31 human 112268295 LOC112268295 uncharacterized LOC112268295 XR_002958751.1 11% (many diffs)
32 human 378108 TRIM74 tripartite motif containing 74 XR_001744750.1 10.8% (many diffs)
33 human 128989 TANGO2 transport and golgi organiz... XR_001755162.1 10.8% (many diffs)
34 human 378108 TRIM74 tripartite motif containing 74 XR_001744736.1 10.7% (many diffs)
35 human 128989 TANGO2 transport and golgi organiz... XR_001755161.1 10.7% (many diffs)
36 human 128989 TANGO2 transport and golgi organiz... XR_001755164.1 10.7% (many diffs)
37 human 9616 RNF7 ring finger protein 7 NR_037703.1 10.7% (many diffs)
38 human 9616 RNF7 ring finger protein 7 NR_037702.1 10.6% (many diffs)
39 human 126123 IZUMO2 IZUMO family member 2 NM_001321449.1 10.5% .9% (many diffs)
40 human 101927415 TMED2-DT TMED2 divergent transcript NR_110049.2 10.5% (many diffs)
41 human 101926964 LOC101926964 uncharacterized LOC101926964 NR_110628.1 10.4% (many diffs)
42 human 284023 RNF227 ring finger protein 227 NR_152444.1 10.2% (many diffs)
43 human 105378716 LINC01562 long intergenic non-protein... NR_147076.1 10.2% (many diffs)
44 human 100996251 LRIG2-DT LRIG2 divergent transcript NR_103777.1 10.2% (many diffs)
45 human 378108 TRIM74 tripartite motif containing 74 XR_001744739.2 10.1% (many diffs)
46 human 128989 TANGO2 transport and golgi organiz... XR_001755163.1 10.1% (many diffs)
47 human 378108 TRIM74 tripartite motif containing 74 XR_001744737.2 9.9% (many diffs)
48 human 9753 ZSCAN12 zinc finger and SCAN domain... NR_160527.1 9.7% (many diffs)
49 human 101929586 LOC101929586 uncharacterized LOC101929586 NR_120363.1 9.5% (many diffs)
50 human 9753 ZSCAN12 zinc finger and SCAN domain... NR_136513.2 9.4% (many diffs)
51 human 107984577 LOC107984577 uncharacterized LOC107984577 XR_001749803.1 9.2% (many diffs)
52 human 9753 ZSCAN12 zinc finger and SCAN domain... NR_133668.1 9.2% (many diffs)
53 human 9753 ZSCAN12 zinc finger and SCAN domain... NR_133669.1 9% (many diffs)
54 human 105374538 LOC105374538 uncharacterized LOC105374538 XR_001741633.1 8.8% (many diffs)
55 human 403150 FLJ31356 uncharacterized protein FLJ... NR_103831.1 8.4% (many diffs)
56 human 100506334 LINC00649 long intergenic non-protein... NR_134558.1 8.2% (many diffs)
57 human 9050 PSTPIP2 proline-serine-threonine ph... XR_935264.2 8.1% (many diffs)
58 human 9601 PDIA4 protein disulfide isomerase... NR_163905.1 7.7% (many diffs)
59 human 100286844 BCDIN3D-AS1 BCDIN3D antisense RNA 1 NR_027501.1 7.6% (many diffs)
60 human 100286844 BCDIN3D-AS1 BCDIN3D antisense RNA 1 NR_027499.1 7.6% (many diffs)
61 human 128989 TANGO2 transport and golgi organiz... NR_104274.2 7.6% (many diffs)
62 human 9753 ZSCAN12 zinc finger and SCAN domain... NR_160526.1 7.6% (many diffs)
63 human 9753 ZSCAN12 zinc finger and SCAN domain... NR_136511.2 7.5% (many diffs)
64 human 57212 TP73-AS1 TP73 antisense RNA 1 NR_033712.1 7.4% (many diffs)
65 human 283267 LINC00294 long intergenic non-protein... NR_015451.1 7.3% (many diffs)
66 human 128989 TANGO2 transport and golgi organiz... NR_136206.1 7.2% (many diffs)
67 human 105375902 LOC105375902 uncharacterized LOC105375902 XR_929049.2 7.1% (many diffs)
68 human 128989 TANGO2 transport and golgi organiz... NR_104275.2 7.1% (many diffs)
69 human 128989 TANGO2 transport and golgi organiz... NR_136212.1 7% (many diffs)
70 human 84816 RTN4IP1 reticulon 4 interacting pro... XR_001743693.2 6.9% (many diffs)
71 human 105378248 LOC105378248 uncharacterized LOC105378248 XR_001749101.1 6.9% (many diffs)
72 human 100288842 B3GNT10 UDP-GlcNAc:betaGal beta-1,3... NR_027442.2 6.8% (many diffs)
73 human 105378248 LOC105378248 uncharacterized LOC105378248 XR_001749102.1 6.8% (many diffs)
74 human 128989 TANGO2 transport and golgi organiz... NR_136211.1 6.8% (many diffs)
75 human 105374538 LOC105374538 uncharacterized LOC105374538 XR_001741632.1 6.7% (many diffs)
76 human 101927954 LOC101927954 uncharacterized LOC101927954 NR_121565.1 6.6% (many diffs)
77 human 105378248 LOC105378248 uncharacterized LOC105378248 XR_944894.2 6.6% (many diffs)
78 human 100506334 LINC00649 long intergenic non-protein... NR_038883.2 6.5% (many diffs)
79 human 23639 LRRC6 leucine rich repeat contain... NR_135911.2 6.3% (many diffs)
80 human 440026 TMEM41B transmembrane protein 41B XR_001747881.1 6.3% (many diffs)
81 human 105378248 LOC105378248 uncharacterized LOC105378248 XR_001749100.1 6.3% (many diffs)
82 human 55501 CHST12 carbohydrate sulfotransfera... XR_002956463.1 6.2% (many diffs)
83 human 646982 LINC00598 long intergenic non-protein... NR_024506.1 6.2% (many diffs)
84 human 57212 TP73-AS1 TP73 antisense RNA 1 NR_033708.1 6% (many diffs)
85 human 646982 LINC00598 long intergenic non-protein... NR_024507.2 5.9% (many diffs)
86 human 23639 LRRC6 leucine rich repeat contain... NR_135913.2 5.9% (many diffs)
87 human 105374538 LOC105374538 uncharacterized LOC105374538 XR_001741631.1 5.9% (many diffs)
88 human 29097 CNIH4 cornichon family AMPA recep... NR_102347.2 5.8% (many diffs)
89 human 200316 APOBEC3F apolipoprotein B mRNA editi... XR_002958675.1 5.6% (many diffs)
90 human 100506834 GAS1RR GAS1 adjacent regulatory RNA NR_049794.1 5.6% (many diffs)
91 human 347862 GATD1 glutamine amidotransferase ... NR_134867.2 5.5% (many diffs)
92 human 9753 ZSCAN12 zinc finger and SCAN domain... NR_028077.2 5.5% (many diffs)
93 human 107985770 LOC107985770 MANTIS NR_164153.1 5.5% (many diffs)
94 human 23639 LRRC6 leucine rich repeat contain... NR_135912.2 5.5% (many diffs)
95 human 347862 GATD1 glutamine amidotransferase ... NR_134868.2 5.5% (many diffs)
96 human 105369325 LOC105369325 uncharacterized LOC105369325 XR_950153.2 5.5% (many diffs)
97 human 347862 GATD1 glutamine amidotransferase ... XR_242802.3 5.4% (many diffs)
98 human 9753 ZSCAN12 zinc finger and SCAN domain... NR_136509.2 5.3% (many diffs)
99 human 9753 ZSCAN12 zinc finger and SCAN domain... NR_136512.2 5.3% (many diffs)
100 human 57212 TP73-AS1 TP73 antisense RNA 1 NR_033709.1 5.2% (many diffs)
101 human 9753 ZSCAN12 zinc finger and SCAN domain... NR_136510.2 5.2% (many diffs)
102 human 148789 B3GALNT2 beta-1,3-N-acetylgalactosam... XR_001736990.1 5.2% (many diffs)
103 human 148789 B3GALNT2 beta-1,3-N-acetylgalactosam... XR_001736989.1 5.1% (many diffs)
104 human 148789 B3GALNT2 beta-1,3-N-acetylgalactosam... XR_001736987.1 5% (many diffs)
105 human 105370807 LOC105370807 uncharacterized LOC105370807 XR_002957767.1 4.9% (many diffs)
106 human 105370807 LOC105370807 uncharacterized LOC105370807 XR_002957766.1 4.9% (many diffs)
107 human 201514 ZNF584 zinc finger protein 584 XR_002958283.1 4.9% (many diffs)
108 human 105370807 LOC105370807 uncharacterized LOC105370807 XR_002957763.1 4.8% (many diffs)
109 human 105370807 LOC105370807 uncharacterized LOC105370807 XR_002957768.1 4.8% (many diffs)
110 human 105370807 LOC105370807 uncharacterized LOC105370807 XR_002957764.1 4.8% (many diffs)
111 human 105370807 LOC105370807 uncharacterized LOC105370807 XR_002957765.1 4.8% (many diffs)
112 human 92105 INTS4 integrator complex subunit 4 XR_002957208.1 4.6% (many diffs)
113 human 63933 MCUR1 mitochondrial calcium unipo... XR_001743579.2 4.5% (many diffs)
114 human 107986871 LOC107986871 ubiquitin-conjugating enzym... XR_002956669.1 4.4% (many diffs)
115 human 80143 SIKE1 suppressor of IKBKE 1 NR_049742.2 4.4% (many diffs)
116 human 10239 AP3S2 adaptor related protein com... NR_037582.2 4.3% (many diffs)
117 human 9392 TGFBRAP1 transforming growth factor ... NR_137328.1 4.3% (many diffs)
118 human 80143 SIKE1 suppressor of IKBKE 1 NR_049741.2 4.3% (many diffs)
119 human 10239 AP3S2 adaptor related protein com... NR_023361.2 4.2% (many diffs)
120 human 11184 MAP4K1 mitogen-activated protein k... NM_007181.6 4.2% 2.3% (many diffs)
121 human 5961 PRPH2 peripherin 2 XR_926295.3 4.1% (many diffs)
122 human 57212 TP73-AS1 TP73 antisense RNA 1 NR_033710.1 4.1% (many diffs)
123 human 29063 ZCCHC4 zinc finger CCHC-type conta... XR_925324.3 4.1% (many diffs)
124 human 11184 MAP4K1 mitogen-activated protein k... XM_017026231.1 4% 2.2% (many diffs)
125 human 26505 CNNM3 cyclin and CBS domain dival... XR_001738702.2 4% (many diffs)
126 human 11184 MAP4K1 mitogen-activated protein k... XM_011526403.1 4% 2.2% (many diffs)
127 human 4287 ATXN3 ataxin 3 NR_028470.2 4% (many diffs)
128 human 8739 HRK harakiri, BCL2 interacting ... NR_073189.3 3.9% (many diffs)
129 human 2140 EYA3 EYA transcriptional coactiv... XR_001737038.1 3.9% (many diffs)
130 human 10198 MPHOSPH9 M-phase phosphoprotein 9 NR_103517.2 3.9% (many diffs)
131 human 4771 NF2 neurofibromin 2 NR_156186.2 3.9% (many diffs)
132 human 4287 ATXN3 ataxin 3 NR_031765.2 3.8% (many diffs)
133 human 4287 ATXN3 ataxin 3 NR_028460.2 3.8% (many diffs)
134 human 57212 TP73-AS1 TP73 antisense RNA 1 NR_033711.1 3.8% (many diffs)
135 human 4287 ATXN3 ataxin 3 NR_028466.2 3.8% (many diffs)
136 human 4287 ATXN3 ataxin 3 NR_028463.2 3.7% (many diffs)
137 human 23431 AP4E1 adaptor related protein com... XR_001751183.1 3.7% (many diffs)
138 human 4287 ATXN3 ataxin 3 NR_028468.2 3.6% (many diffs)
139 human 4287 ATXN3 ataxin 3 NR_028454.2 3.6% (many diffs)
140 human 4287 ATXN3 ataxin 3 NR_028469.2 3.6% (many diffs)
141 human 4287 ATXN3 ataxin 3 NR_028456.2 3.6% (many diffs)
142 human 4287 ATXN3 ataxin 3 NR_028462.2 3.6% (many diffs)
143 human 4287 ATXN3 ataxin 3 NR_028464.2 3.6% (many diffs)
144 human 4287 ATXN3 ataxin 3 NR_028458.2 3.6% (many diffs)
145 human 4287 ATXN3 ataxin 3 NR_028461.2 3.6% (many diffs)
146 human 4287 ATXN3 ataxin 3 NR_028453.2 3.6% (many diffs)
147 human 4287 ATXN3 ataxin 3 NR_028467.2 3.6% (many diffs)
148 human 4287 ATXN3 ataxin 3 NR_028465.2 3.5% (many diffs)
149 human 4287 ATXN3 ataxin 3 NR_028455.2 3.5% (many diffs)
150 human 4287 ATXN3 ataxin 3 NR_028459.2 3.5% (many diffs)
151 human 4287 ATXN3 ataxin 3 NR_028457.2 3.5% (many diffs)
152 human 105375634 LOC105375634 uncharacterized LOC105375634 XR_928392.3 3.4% (many diffs)
153 human 6198 RPS6KB1 ribosomal protein S6 kinase B1 XR_002958051.1 3.4% (many diffs)
154 human 100996517 SEC22B3P SEC22 homolog B3, pseudogene NR_158170.1 3.2% (many diffs)
155 human 100996716 SEC22B2P SEC22 homolog B2, pseudogene NR_158171.1 3.2% (many diffs)
156 human 105379251 LOC105379251 uncharacterized LOC105379251 XR_948994.3 3.2% (many diffs)
157 human 102724364 SEC22B4P SEC22 homolog B4, pseudogene XR_922650.2 3.1% (many diffs)
158 human 653857 ACTR3C actin related protein 3C NR_147022.1 3.1% (many diffs)
159 human 51072 MEMO1 mediator of cell motility 1 NR_126034.3 3.1% (many diffs)
160 human 105379251 LOC105379251 uncharacterized LOC105379251 XR_001746684.2 3.1% (many diffs)
161 human 653857 ACTR3C actin related protein 3C NR_147021.1 3% (many diffs)
162 human 80025 PANK2 pantothenate kinase 2 NR_136715.2 3% (many diffs)
163 human 51072 MEMO1 mediator of cell motility 1 NR_163996.1 3% (many diffs)
164 human 653857 ACTR3C actin related protein 3C NR_147020.1 3% (many diffs)
165 human 51072 MEMO1 mediator of cell motility 1 NR_163998.1 3% (many diffs)
166 human 653857 ACTR3C actin related protein 3C NR_147016.1 2.9% (many diffs)
167 human 51072 MEMO1 mediator of cell motility 1 NR_126032.2 2.9% (many diffs)
168 human 653857 ACTR3C actin related protein 3C NR_147014.1 2.9% (many diffs)
169 human 653857 ACTR3C actin related protein 3C NR_147018.1 2.9% (many diffs)
170 human 653857 ACTR3C actin related protein 3C NR_147015.1 2.9% (many diffs)
171 human 653857 ACTR3C actin related protein 3C NR_147017.1 2.9% (many diffs)
172 human 51072 MEMO1 mediator of cell motility 1 NR_163995.1 2.9% (many diffs)
173 human 55346 TCP11L1 t-complex 11 like 1 XR_001747920.2 2.9% (many diffs)
174 human 653857 ACTR3C actin related protein 3C NR_147019.1 2.8% (many diffs)
175 human 51072 MEMO1 mediator of cell motility 1 NR_163997.1 2.8% (many diffs)
176 human 284454 LOC284454 uncharacterized LOC284454 NR_036515.2 2.8% (many diffs)
177 human 653857 ACTR3C actin related protein 3C NR_147012.2 2.8% (many diffs)
178 human 5939 RBMS2 RNA binding motif single st... XR_002957368.1 2.7% (many diffs)
179 human 105375079 LOC105375079 uncharacterized LOC105375079 XR_001743802.2 2.4% (many diffs)
180 human 9819 TSC22D2 TSC22 domain family member 2 NR_130136.2 2.1% (many diffs)
181 human 80025 PANK2 pantothenate kinase 2 XR_002958533.1 1.9% (many diffs)
182 human 116984 ARAP2 ArfGAP with RhoGAP domain, ... XR_001741120.1 1.6% (many diffs)
183 human 116984 ARAP2 ArfGAP with RhoGAP domain, ... XR_001741122.1 1.6% (many diffs)
184 human 116984 ARAP2 ArfGAP with RhoGAP domain, ... XR_001741119.1 1.6% (many diffs)
185 human 105375079 LOC105375079 uncharacterized LOC105375079 XR_001743801.2 1.6% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
90
ORF end:
372
ORF length:
282
Sequence:
1TCAGACAGTG GTTCAAAGTT TTTTTCTTCC ATTTCAGGTG TCGTGAGGCT AGCATCGATT
61GATCAACAAG TTTGTACAAA AAAGTTGGCA TGGAGTCTTG CTCTGTCACC CAGGCTGGAG
121TGCAATGGCG CGATCTCCAC TCACTGCAAC CTCTGCGTAC CAGGTTCAAG CGATTCTCCT
181GTCTCAGCCT CCTGAGTAGC TGGGATTACA GGTGCCCACC ACCACAGCTG GCTAATTTTT
241GTATTTTTAG TAGAGACTGG GTTTTACCAT ATTGGCCAGA CTGGTCTCGA ACTCCTGACC
301TCAGGTGGTC CGCCTGCCTT GGCTTCCCAA AGTGCTGGGA TTATAGGAGT GAGCCACTGC
361GCCTGGCCAT TTGCCCAACT TTCTTGTACA AAGTGGTTGA TATCGGTAAG CCTATCCCTA
421ACCCTCTCCT CGGTCTCGAT TCTACGTAGT AATGAACTAG TCCGTAACTT GAAAGTATTT
481CGATTTCTTG GCTTTATATA TCTTGTGGAA AGGACGATCC CTGCGCCGTC CGGGTTTTCG
541AACGCGTTAA GTCgacaatc aacctctgga ttacaaaatt tgtgaaagat t

Download FASTA (ORF) (Full)