Nucleotide Global Alignment
Description
- Query:
- TRCN0000469746
- Subject:
- NR_028461.2
- Aligned Length:
- 6796
- Identities:
- 245
- Gaps:
- 6514
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTGGGGGCCGTTGGCTCCAGACAAATAAACATGGAGTCCATCTTCCACGAGAAACAAGAAGGCTCACTTTGTGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCAACATTGCCTGAATAACTTATTGCAAGGAGAATATTTTAGCCCTGTGGAATTATCCTCAATTGCACATCAGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGGATGAGGAGGAGAGGATGAGAATGGCAGAAGGAGGAGTTACTAGTGAAGATTATCGCACGTTTTTACAGCAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCTTCTGGAAATATGGATGACAGTGGTTTTTTCTCTATTCAGGTTATAAGCAATGCCTTGAAAGTTTGGGGTTT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGAACTAATCCTGTTCAACAGTCCAGAGTATCAGAGGCTCAGGATCGATCCTATAAATGAAAGATCATTTATAT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCAATTATAAGGAACACTGGTTTACAGTTAGAAAATTAGGAAAACAGGTTATTCTATATTTGTCGTTAAGGGTG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ATCTGCCAGATTGCGAAGCTGACCAACTCCTGCAGATGATTAGGGTCCAACAGATGCATCGACCAAAACTTATT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GGAGAAGAATTAGCACAACTAAAAGAGCAAAGAGTCCATAAAACAGACCTGGAACGAGTGTTAGAAGCAAATGA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TGGCTCAGGAATGTTAGACGAAGATGAGGAGGATTTGCAGAGGGCTCTGGCACTAAGTCGCCAAGAAATTGACA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TGGAAGATGAGGAAGCAGATCTCCGCAGGGCTATTCAGCTAAGTATGCAAGGTAGTTCCAGAAACATATCTCAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GATATGACACAGACATCAGGTACAAATCTTACTTCAGAAGAGCTTCGGAAGAGACGAGAAGCCTACTTTGAAAA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ACAGCAGCAAAAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACATCCAT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GTGAAAGGCCAGCCACCAGTTCAGGAGCACTTGGGAGTGATCTAGGTGATGCTATGAGTGAAGAAGACATGCTT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CAGGCAGCTGTGACCATGTCTTTAGAAACTGTCAGAAATGATTTGAAAACAGAAGGAAAAAAATAATACCTTTA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AAAAATAATTTAGATATTCATACTTTCCAACATTATCCTGTGTGATTACAGCATAGGGTCCACTTTGGTAATGT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GTCAAAGAGATGAGGAAATAAGACTTTTAGCGGTTTGCAAACAAAATGATGGGAAAGTGGAACAATGCGTCGGT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TGTAGGACTAAATAATGATCTTCCAAATATTAGCCAAAGAGGCATTCAGCAATTAAAGACATTTAAAATAGTTT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TCTAAATGTTTCTTTTTCTTTTTTGAGTGTGCAATATGTAACATGTCTAAAGTTAGGGCATTTTTCTTGGATCT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TTTTGCAGACTAGCTAATTAGCTCTCGCCTCAGGCTTTTTCCATATAGTTTGTTTTCTTTTTCTGTCTTGTAGG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TAAGTTGGCTCACATCATGTAATAGTGGCTTTCATTTCTTATTAACCAAATTAACCTTTCAGGAAAGTATCTCT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 ACTTTCCTGATGTTGATAATAGTAATGGTTCTAGAAGGATGAACAGTTCTCCCTTCAACTGTATACCGTGTGCT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CCAGTGTTTTCTTGTGTTGTTTTCTCTGATCACAACTTTTCTGCTACCTGGTTTTCATTATTTTCCCACAATTC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TTTTGAAAGATGGTAATCTTTTCTGAGGTTTAGCGTTTTAAGCCCTACGATGGGATCATTATTTCATGACTGGT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GCGTTCCTAAACTCTGAAATCAGCCTTGCACAAGTACTTGAGAATAAATGAGCATTTTTTAAAATGTGTGAGCA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TGTGCTTTCCCAGATGCTTTATGAATGTCTTTTCACTTATATCAAAACCTTACAGCTTTGTTGCAACCCCTTCT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TCCTGCGCCTTATTTTTTCCTTTCTTCTCCAATTGAGAAAACTAGGAGAAGCATAGTATGCAGGCAAGTCTCCT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TCTGTTAGAAGACTAAACATACGTACCCACCATGAATGTATGATACATGAAATTTGGCCTTCAATTTTAATAGC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 AGTTTTATTTTATTTTTTCTCCTATGACTGGAGCTTTGTGTTCTCTTTACAGTTGAGTCATGGAATGTAGGTGT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CTGCTTCACATCTTTTAGTAGGTATAGCTTGTCAAAGATGGTGATCTGGAACATGAAAATAATTTACTAATGAA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 AATATGTTTAAATTTATACTGTGATTTGACACTTGCATCATGTTTAGATAGCTTAAGAACAATGGAAGTCACAG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TACTTAGTGGATCTATAAATAAGAAAGTCCATAGTTTTGATAAATATTCTCTTTAATTGAGATGTACAGAGAGT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TTCTTGCTGGGTCAATAGGATAGTATCATTTTGGTGAAAACCATGTCTCTGAAATTGATGTTTTAGTTTCAGTG 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TTCCCTATCCCTCATTCTCCATCTCCTTTTGAAGCTCTTTTGAATGTTGAATTGTTCATAAGCTAAAATCCAAG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 AAATTTCAGCTGACAACTTCGAAAATTATAATATGGTATATTGCCCTCCTGGTGTGTGGCTGCACACATTTTAT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 CAGGGAAAGTTTTTTGATCTAGGATTTATTGCTAACTAACTGAAAAGAGAAGAAAAAATATCTTTTATTTATGA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 TTATAAAATAGCTTTTTCTTCGATATAACAGATTTTTTAAGTCATTATTTTGTGCCAATCAGTTTTCTGAAGTT 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 TCCCTTACACAAAAGGATAGCTTTATTTTAAAATCTAAAGTTTCTTTTAATAGTTAAAAATGTTTCAGAAGAAT 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TATAAAACTTTAAAACTGCAAGGGATGTTGGAGTTTAGTACTACTCCCTCAAGATTTAAAAAGCTAAATATTTT 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 AAGACTGAACATTTATGTTAATTATTACCAGTGTGTTTGTCATATTTTCCATGGATATTTGTTCATTACCTTTT 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 TCCATTGAAAAGTTACATTAAACTTTTCATACACTTGAATTGATGAGCTACCTAATATAAAAATGAGAAAACCA 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 ATATGCATTTTAAAGTTTTAACTTTAGAGTTTATAAAGTTCATATATACCCTAGTTAAAGCACTTAAGAAAATA 3034
Query 1 ------------------------------------------------------------ATGGAGTCTTGCTC 14
|.|||||||||||.
Sbjct 3035 TGGCATGTTTGACTTTTAGTTCCTAGAGAGTTTTTGTTTTTGTTTTTGTTTTTTTTTGAGACGGAGTCTTGCTA 3108
Query 15 TGTCACCCAGGCTGGAGTGCAATGGCGCGATCTCCACTCACTGCAACCTCTGCGTACCAGGTTCAAGCGATTCT 88
||||.||||||||||||.|||.||||..||||||..||||||.||||.||..|.|.||.|||||||||.|||||
Sbjct 3109 TGTCTCCCAGGCTGGAGGGCAGTGGCATGATCTCGGCTCACTACAACTTCCACCTCCCGGGTTCAAGCAATTCT 3182
Query 89 CCTGTCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCCCACCACCACAGCTGGCTAATTTTTGTATTTTTAGT 162
||||.||||||||||.|||||||||||||||||||.|||||||||||||.|.|||..||||||||||||||.||
Sbjct 3183 CCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCGCCCACCACCACACCCGGCAGATTTTTGTATTTTTGGT 3256
Query 163 AGAGACTGGGTTTTACCAT-ATTGGCCAGACTGGTCTCGAACTCCTGACCTCAGGTGGTCCGCCTGCCTTGGCT 235
||||||..|||||.|.||| .||||||||.|||||||||||||||||||||||||||.|||||||||||||||.
Sbjct 3257 AGAGACGCGGTTTCATCATGTTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCGCCTGCCTTGGCC 3330
Query 236 TCCCAAAGTGCTGGGATTATAGGAGTGAGCCACTGCGCCTGGCCA---------TT------------------ 282
||||||||||.||||||||.|||..|||||||||||||||||||| ||
Sbjct 3331 TCCCAAAGTGTTGGGATTACAGGCATGAGCCACTGCGCCTGGCCAGCTAGAGAGTTTTTAAAGCAGAGCTGAGC 3404
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3405 ACACACTGGATGCGTTTGAATGTGTTTGTGTAGTTTGTTGTGAAATTGTTACATTTAGCAGGCAGATCCAGAAG 3478
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3479 CACTAGTGAACTGTCATCTTGGTGGGGTTGGCTTAAATTTAATTGACTGTTTAGATTCCATTTCTTAATTGATT 3552
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3553 GGCCAGTATGAAAAGATGCCAGTGCAAGTAACCATAGTATCAAAAAAGTTAAAAATTATTCAAAGCTATAGTTT 3626
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3627 ATACATCAGGTACTGCCATTTACTGTAAACCACCTGCAAGAAAGTCAGGAACAACTAAATTCACAAGAACTGTC 3700
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3701 CTGCTAAGAAGTGTATTAAAGATTTCCATTTTGTTTTACTAATTGGGAACATCTTAATGTTTAATATTTAAACT 3774
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3775 ATTGGTATCATTTTTCTAATGTATAATTTGTATTACTGGGATCAAGTATGTACAGTGGTGATGCTAGTAGAAGT 3848
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3849 TTAAGCCTTGGAAATACCACTTTCATATTTTCAGATGTCATGGATTTAATGAGTAATTTATGTTTTTAAAATTC 3922
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3923 AGAATAGTTAATCTCTGATCTAAAACCATCAATCTATGTTTTTTACGGTAATCATGTAAATATTTCAGTAATAT 3996
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3997 AAACTGTTTGAAAAGGCTGCTGCAGGTAAACTCTATACTAGGATCTTGGCCAAATAATTTACAATTCACAGAAT 4070
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4071 ATTTTATTTAAGGTGGTGCTTTTTTTTTTTGTCCTTAAAACTTGATTTTTCTTAACTTTATTCATGATGCCAAA 4144
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4145 GTAAATGAGGAAAAAAACTCAAAACCAGTTGAGTATCATTGCAGACAAAACTACCAGTAGTCCATATTGTTTAA 4218
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4219 TATTAAGTTGAATAAAATAAATTTTATTTCAGTCAGAGCCTAAATCACATTTTGATTGTCTGAATTTTTGATAC 4292
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4293 TATTTTTAAAATCATGCTAGTGGCGGCTGGGCGTGGTAGCTCACGCCTGTAATCCCAGCATTTTGGGAGGCCGA 4366
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4367 AGTGGGTGGATCACGAGGTCGGGAGTTCGAGACCAGCTTGGCCAAAATGGTGAAACCCCATCTGTACTAAAAAC 4440
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4441 TACAAAAATTAGCTGGGCGCGGTGGCAGGTGCCTGTAATCCCAGCTACCTGGGAGTCTGAGGCAGGAGAATTGC 4514
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4515 TTGAACCCTGGCGACAGAGGATGCAGTGAGCCAAGATGGTGCCACTGTACTCCAGACTGGGCGACAGAGTGAGA 4588
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4589 CTCTGTCTCAAAAAAAAAAAAAAAATCATGCTAGTGCCAAGAGCTACTAAATTCTTAAAACCGGCCCATTGGAC 4662
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4663 CTGTACAGATAAAAAATAGATTCAGTGCATAATCAAAATATGATAATTTTAAAATCTTAAGTAGAAAAATAAAT 4736
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4737 CTTGATGTTTTAAATTCTTACGAGGATTCAATAGTTAATATTGATGATCTCCCGGCTGGGTGCAGTGGCTCACG 4810
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4811 CCTGTAATCCCAGCAGTTCTGGAGGCTGAGGTGGGCGAATCACTTCAGGCCAGGAGTTCAAGACCAGTCTGGGC 4884
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4885 AACATGGTGAAACCTCGTTTCTACTAAAAATACAAAAATTAGCCGGGCGTGGTTGCACACACTTGTAATCCCAG 4958
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4959 CTACTCAGGAGGCTAAGAATCGCATGAGCCTAGGAGGCAGAGGTTGCAGAGTGCCAAGGGCTCACCACTGCATT 5032
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5033 CCAGCCTGCCCAACAGAGTGAGACACTGTTTCTGAAAAAAAAAAATATATATATATATATATATATGTGTGTAT 5106
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5107 ATATATATGTATATATATATGACTTCCTATTAAAAACTTTATCCCAGTCGGGGGCAGTGGCTCACGCCTGTAAT 5180
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5181 CCCAACACTTTGGGAGGCTGAGGCAGGTGGATCACCTGAAGTCCGGAGTTTGAGACCAGCCTGGCCAACATGGT 5254
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5255 GAAACCCCATCTCTACTAAAAATACAAAACTTAAGCCAGGTATGGTGGCGGGCACCTGTAATCCCAGTTACTTG 5328
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5329 GGAGGCTGAGGCAGGAGAATCGTTTAAACCCAGGAGGTGGAGGTTGCAGTGAGCTGAGATCGTGCCATTGCACT 5402
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5403 CTAGCCTGGGCAACAAGAGTAAAACTCCATCTTAAAGGTTTGTTTGTTTTTTTTTAATCCGGAAACGAAGAGGC 5476
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5477 GTTGGGCCGCTATTTTCTTTTTCTTTCTTTCTTTCTTTCTTTTTTTTTTTTTCTGAGACGGAGTCTAGCTCTGC 5550
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5551 TGCCCAGGCTGGAGTACAATGACACGATGTTGGCTCACTGCAACCTCCACCTCCTGGGTTCAAGCGATTCTCCT 5624
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5625 GCCTCAGCCTCCCAAGTACCTGGGATTACAGGCACCTGCCACTACACCTGGCGAATATTTGTTTTTTTTAGTAG 5698
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5699 AGACGGGCTTTTACCATGTTAGGCTGGTCTCAAACTCCTGACCTCAGGTGATCTGCCTGCCTTGGCCTCCCAAA 5772
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5773 GTGCTGGGATTACAGGTGCAGGCCACCACACCCGGCCTTGGGCCACTGTTTTCAAAGTGAATTGTTTGTTGTAT 5846
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5847 CGAGTCCTTAAGTATGGATATATATGTGACCCTAATTAAGAACTACCAGATTGGATCAACTAATCATGTCAGCA 5920
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5921 ATGTAAATAACTTTATTTTTCATATTCAAAATAAAAACTTTCTTTTATTTCTGGCCCCTTTATAACCAGCATCT 5994
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5995 TTTTGCTTTAAAAAATGACCTGGCTTTGTATTTTTTTAGTCTTAAACATAATAAAAATATTTTTGTTCTAATTT 6068
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6069 GCTTTCATGAGTGAAGATTATTGACATCGTTGGTAAATTCTAGAATTTTGATTTTGTTTTTTAATTTGAAGAAA 6142
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6143 ATCTTTGCTATTATTATTTTTTCCAAGTGGTCTGGCATTTTAAGAATTAGTGCTAATAACGTAACTTCTAAATT 6216
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6217 TGTCGTAATTGGCATGTTTAATAGCATATCAAAAAACATTTTAAGCCTGTGGATTCATAGACAAAGCAATGAGA 6290
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6291 AACATTAGTAAAATATAAATGGATATTCCTGATGCATTTAGGAAGCTCTCAATTGTCTCTTGCATAGTTCAAGG 6364
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6365 AATGTTTTCTGAATTTTTTTAATGCTTTTTTTTTTTTTGAAAGAGGAAAACATACATTTTTAAATGTGATTATC 6438
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6439 TAATTTTTACAACACTGGGCTATTAGGAATAACTTTTTAAAAATTACTGTTCTGTATAAATATTTGAAATTCAA 6512
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6513 GTACAGAAAATATCTGAAACAAAAAGCATTGTTGTTTGGCCATGATACAAGTGCACTGTGGCAGTGCCGCTTGC 6586
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6587 TCAGGACCCAGCCCTGCAGCCCTTCTGTGTGTGCTCCCTCGTTAAGTTCATTTGCTGTTATTACACACACAGGC 6660
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6661 CTTCCTGTCTGGTCGTTAGAAAAGCCGGGCTTCCAAAGCACTGTTGAACACAGGATTCTGTTGTTAGTGTGGAT 6734
Query 283 -------------------------------------------------------------- 282
Sbjct 6735 GTTCAATGAGTTGTATTTTAAATATCAAAGATTATTAAATAAAGATAATGTTTGCTTTTCTA 6796
