Nucleotide Global Alignment
Description
- Query:
- TRCN0000469746
- Subject:
- NR_028469.2
- Aligned Length:
- 6645
- Identities:
- 245
- Gaps:
- 6363
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTGGGGGCCGTTGGCTCCAGACAAATAAACATGGAGTCCATCTTCCACGAGAAACAGCCTTCTGGAAATATGGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGACAGTGGTTTTTTCTCTATTCAGAAATGAAAGATCATTTATATGCAATTATAAGGAACACTGGTTTACAGTT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGAAAATTAGGAAAACAGTGGTTTAACTTGAATTCTCTCTTGACGGGTCCAGAATTAATATCAGATACATATCT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGCACTTTTCTTGGCTCAATTACAACAGGAAGGTTATTCTATATTTGTCGTTAAGGGTGATCTGCCAGATTGCG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AAGCTGACCAACTCCTGCAGATGATTAGGGTCCAACAGATGCATCGACCAAAACTTATTGGAGAAGAATTAGCA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CAACTAAAAGAGCAAAGAGTCCATAAAACAGACCTGGAACGAGTGTTAGAAGCAAATGATGGCTCAGGAATGTT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AGACGAAGATGAGGAGGATTTGCAGAGGGCTCTGGCACTAAGTCGCCAAGAAATTGACATGGAAGATGAGGAAG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CAGATCTCCGCAGGGCTATTCAGCTAAGTATGCAAGGTAGTTCCAGAAACATATCTCAAGATATGACACAGACA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TCAGGTACAAATCTTACTTCAGAAGAGCTTCGGAAGAGACGAGAAGCCTACTTTGAAAAGTAAAGTAGTTGACA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GCAGCAAAAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACATCCATGTG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AAAGGCCAGCCACCAGTTCAGGAGCACTTGGGAGTGATCTAGGTGATGCTATGAGTGAAGAAGACATGCTTCAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GCAGCTGTGACCATGTCTTTAGAAACTGTCAGAAATGATTTGAAAACAGAAGGAAAAAAATAATACCTTTAAAA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AATAATTTAGATATTCATACTTTCCAACATTATCCTGTGTGATTACAGCATAGGGTCCACTTTGGTAATGTGTC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AAAGAGATGAGGAAATAAGACTTTTAGCGGTTTGCAAACAAAATGATGGGAAAGTGGAACAATGCGTCGGTTGT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AGGACTAAATAATGATCTTCCAAATATTAGCCAAAGAGGCATTCAGCAATTAAAGACATTTAAAATAGTTTTCT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AAATGTTTCTTTTTCTTTTTTGAGTGTGCAATATGTAACATGTCTAAAGTTAGGGCATTTTTCTTGGATCTTTT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TGCAGACTAGCTAATTAGCTCTCGCCTCAGGCTTTTTCCATATAGTTTGTTTTCTTTTTCTGTCTTGTAGGTAA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GTTGGCTCACATCATGTAATAGTGGCTTTCATTTCTTATTAACCAAATTAACCTTTCAGGAAAGTATCTCTACT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TTCCTGATGTTGATAATAGTAATGGTTCTAGAAGGATGAACAGTTCTCCCTTCAACTGTATACCGTGTGCTCCA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GTGTTTTCTTGTGTTGTTTTCTCTGATCACAACTTTTCTGCTACCTGGTTTTCATTATTTTCCCACAATTCTTT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TGAAAGATGGTAATCTTTTCTGAGGTTTAGCGTTTTAAGCCCTACGATGGGATCATTATTTCATGACTGGTGCG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TTCCTAAACTCTGAAATCAGCCTTGCACAAGTACTTGAGAATAAATGAGCATTTTTTAAAATGTGTGAGCATGT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GCTTTCCCAGATGCTTTATGAATGTCTTTTCACTTATATCAAAACCTTACAGCTTTGTTGCAACCCCTTCTTCC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TGCGCCTTATTTTTTCCTTTCTTCTCCAATTGAGAAAACTAGGAGAAGCATAGTATGCAGGCAAGTCTCCTTCT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GTTAGAAGACTAAACATACGTACCCACCATGAATGTATGATACATGAAATTTGGCCTTCAATTTTAATAGCAGT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TTTATTTTATTTTTTCTCCTATGACTGGAGCTTTGTGTTCTCTTTACAGTTGAGTCATGGAATGTAGGTGTCTG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CTTCACATCTTTTAGTAGGTATAGCTTGTCAAAGATGGTGATCTGGAACATGAAAATAATTTACTAATGAAAAT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 ATGTTTAAATTTATACTGTGATTTGACACTTGCATCATGTTTAGATAGCTTAAGAACAATGGAAGTCACAGTAC 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TTAGTGGATCTATAAATAAGAAAGTCCATAGTTTTGATAAATATTCTCTTTAATTGAGATGTACAGAGAGTTTC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TTGCTGGGTCAATAGGATAGTATCATTTTGGTGAAAACCATGTCTCTGAAATTGATGTTTTAGTTTCAGTGTTC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 CCTATCCCTCATTCTCCATCTCCTTTTGAAGCTCTTTTGAATGTTGAATTGTTCATAAGCTAAAATCCAAGAAA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TTTCAGCTGACAACTTCGAAAATTATAATATGGTATATTGCCCTCCTGGTGTGTGGCTGCACACATTTTATCAG 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 GGAAAGTTTTTTGATCTAGGATTTATTGCTAACTAACTGAAAAGAGAAGAAAAAATATCTTTTATTTATGATTA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 TAAAATAGCTTTTTCTTCGATATAACAGATTTTTTAAGTCATTATTTTGTGCCAATCAGTTTTCTGAAGTTTCC 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 CTTACACAAAAGGATAGCTTTATTTTAAAATCTAAAGTTTCTTTTAATAGTTAAAAATGTTTCAGAAGAATTAT 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 AAAACTTTAAAACTGCAAGGGATGTTGGAGTTTAGTACTACTCCCTCAAGATTTAAAAAGCTAAATATTTTAAG 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 ACTGAACATTTATGTTAATTATTACCAGTGTGTTTGTCATATTTTCCATGGATATTTGTTCATTACCTTTTTCC 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 ATTGAAAAGTTACATTAAACTTTTCATACACTTGAATTGATGAGCTACCTAATATAAAAATGAGAAAACCAATA 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 TGCATTTTAAAGTTTTAACTTTAGAGTTTATAAAGTTCATATATACCCTAGTTAAAGCACTTAAGAAAATATGG 2886
Query 1 ---------------------------------------------------------ATGGAGTCTTGCTCTGT 17
|.|||||||||||.|||
Sbjct 2887 CATGTTTGACTTTTAGTTCCTAGAGAGTTTTTGTTTTTGTTTTTGTTTTTTTTTGAGACGGAGTCTTGCTATGT 2960
Query 18 CACCCAGGCTGGAGTGCAATGGCGCGATCTCCACTCACTGCAACCTCTGCGTACCAGGTTCAAGCGATTCTCCT 91
|.||||||||||||.|||.||||..||||||..||||||.||||.||..|.|.||.|||||||||.||||||||
Sbjct 2961 CTCCCAGGCTGGAGGGCAGTGGCATGATCTCGGCTCACTACAACTTCCACCTCCCGGGTTCAAGCAATTCTCCT 3034
Query 92 GTCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCCCACCACCACAGCTGGCTAATTTTTGTATTTTTAGTAGA 165
|.||||||||||.|||||||||||||||||||.|||||||||||||.|.|||..||||||||||||||.|||||
Sbjct 3035 GCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCGCCCACCACCACACCCGGCAGATTTTTGTATTTTTGGTAGA 3108
Query 166 GACTGGGTTTTACCAT-ATTGGCCAGACTGGTCTCGAACTCCTGACCTCAGGTGGTCCGCCTGCCTTGGCTTCC 238
|||..|||||.|.||| .||||||||.|||||||||||||||||||||||||||.|||||||||||||||.|||
Sbjct 3109 GACGCGGTTTCATCATGTTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCGCCTGCCTTGGCCTCC 3182
Query 239 CAAAGTGCTGGGATTATAGGAGTGAGCCACTGCGCCTGGCCA---------TT--------------------- 282
|||||||.||||||||.|||..|||||||||||||||||||| ||
Sbjct 3183 CAAAGTGTTGGGATTACAGGCATGAGCCACTGCGCCTGGCCAGCTAGAGAGTTTTTAAAGCAGAGCTGAGCACA 3256
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3257 CACTGGATGCGTTTGAATGTGTTTGTGTAGTTTGTTGTGAAATTGTTACATTTAGCAGGCAGATCCAGAAGCAC 3330
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3331 TAGTGAACTGTCATCTTGGTGGGGTTGGCTTAAATTTAATTGACTGTTTAGATTCCATTTCTTAATTGATTGGC 3404
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3405 CAGTATGAAAAGATGCCAGTGCAAGTAACCATAGTATCAAAAAAGTTAAAAATTATTCAAAGCTATAGTTTATA 3478
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3479 CATCAGGTACTGCCATTTACTGTAAACCACCTGCAAGAAAGTCAGGAACAACTAAATTCACAAGAACTGTCCTG 3552
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3553 CTAAGAAGTGTATTAAAGATTTCCATTTTGTTTTACTAATTGGGAACATCTTAATGTTTAATATTTAAACTATT 3626
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3627 GGTATCATTTTTCTAATGTATAATTTGTATTACTGGGATCAAGTATGTACAGTGGTGATGCTAGTAGAAGTTTA 3700
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3701 AGCCTTGGAAATACCACTTTCATATTTTCAGATGTCATGGATTTAATGAGTAATTTATGTTTTTAAAATTCAGA 3774
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3775 ATAGTTAATCTCTGATCTAAAACCATCAATCTATGTTTTTTACGGTAATCATGTAAATATTTCAGTAATATAAA 3848
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3849 CTGTTTGAAAAGGCTGCTGCAGGTAAACTCTATACTAGGATCTTGGCCAAATAATTTACAATTCACAGAATATT 3922
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3923 TTATTTAAGGTGGTGCTTTTTTTTTTTGTCCTTAAAACTTGATTTTTCTTAACTTTATTCATGATGCCAAAGTA 3996
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3997 AATGAGGAAAAAAACTCAAAACCAGTTGAGTATCATTGCAGACAAAACTACCAGTAGTCCATATTGTTTAATAT 4070
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4071 TAAGTTGAATAAAATAAATTTTATTTCAGTCAGAGCCTAAATCACATTTTGATTGTCTGAATTTTTGATACTAT 4144
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4145 TTTTAAAATCATGCTAGTGGCGGCTGGGCGTGGTAGCTCACGCCTGTAATCCCAGCATTTTGGGAGGCCGAAGT 4218
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4219 GGGTGGATCACGAGGTCGGGAGTTCGAGACCAGCTTGGCCAAAATGGTGAAACCCCATCTGTACTAAAAACTAC 4292
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4293 AAAAATTAGCTGGGCGCGGTGGCAGGTGCCTGTAATCCCAGCTACCTGGGAGTCTGAGGCAGGAGAATTGCTTG 4366
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4367 AACCCTGGCGACAGAGGATGCAGTGAGCCAAGATGGTGCCACTGTACTCCAGACTGGGCGACAGAGTGAGACTC 4440
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4441 TGTCTCAAAAAAAAAAAAAAAATCATGCTAGTGCCAAGAGCTACTAAATTCTTAAAACCGGCCCATTGGACCTG 4514
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4515 TACAGATAAAAAATAGATTCAGTGCATAATCAAAATATGATAATTTTAAAATCTTAAGTAGAAAAATAAATCTT 4588
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4589 GATGTTTTAAATTCTTACGAGGATTCAATAGTTAATATTGATGATCTCCCGGCTGGGTGCAGTGGCTCACGCCT 4662
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4663 GTAATCCCAGCAGTTCTGGAGGCTGAGGTGGGCGAATCACTTCAGGCCAGGAGTTCAAGACCAGTCTGGGCAAC 4736
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4737 ATGGTGAAACCTCGTTTCTACTAAAAATACAAAAATTAGCCGGGCGTGGTTGCACACACTTGTAATCCCAGCTA 4810
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4811 CTCAGGAGGCTAAGAATCGCATGAGCCTAGGAGGCAGAGGTTGCAGAGTGCCAAGGGCTCACCACTGCATTCCA 4884
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4885 GCCTGCCCAACAGAGTGAGACACTGTTTCTGAAAAAAAAAAATATATATATATATATATATATGTGTGTATATA 4958
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4959 TATATGTATATATATATGACTTCCTATTAAAAACTTTATCCCAGTCGGGGGCAGTGGCTCACGCCTGTAATCCC 5032
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5033 AACACTTTGGGAGGCTGAGGCAGGTGGATCACCTGAAGTCCGGAGTTTGAGACCAGCCTGGCCAACATGGTGAA 5106
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5107 ACCCCATCTCTACTAAAAATACAAAACTTAAGCCAGGTATGGTGGCGGGCACCTGTAATCCCAGTTACTTGGGA 5180
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5181 GGCTGAGGCAGGAGAATCGTTTAAACCCAGGAGGTGGAGGTTGCAGTGAGCTGAGATCGTGCCATTGCACTCTA 5254
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5255 GCCTGGGCAACAAGAGTAAAACTCCATCTTAAAGGTTTGTTTGTTTTTTTTTAATCCGGAAACGAAGAGGCGTT 5328
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5329 GGGCCGCTATTTTCTTTTTCTTTCTTTCTTTCTTTCTTTTTTTTTTTTTCTGAGACGGAGTCTAGCTCTGCTGC 5402
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5403 CCAGGCTGGAGTACAATGACACGATGTTGGCTCACTGCAACCTCCACCTCCTGGGTTCAAGCGATTCTCCTGCC 5476
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5477 TCAGCCTCCCAAGTACCTGGGATTACAGGCACCTGCCACTACACCTGGCGAATATTTGTTTTTTTTAGTAGAGA 5550
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5551 CGGGCTTTTACCATGTTAGGCTGGTCTCAAACTCCTGACCTCAGGTGATCTGCCTGCCTTGGCCTCCCAAAGTG 5624
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5625 CTGGGATTACAGGTGCAGGCCACCACACCCGGCCTTGGGCCACTGTTTTCAAAGTGAATTGTTTGTTGTATCGA 5698
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5699 GTCCTTAAGTATGGATATATATGTGACCCTAATTAAGAACTACCAGATTGGATCAACTAATCATGTCAGCAATG 5772
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5773 TAAATAACTTTATTTTTCATATTCAAAATAAAAACTTTCTTTTATTTCTGGCCCCTTTATAACCAGCATCTTTT 5846
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5847 TGCTTTAAAAAATGACCTGGCTTTGTATTTTTTTAGTCTTAAACATAATAAAAATATTTTTGTTCTAATTTGCT 5920
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5921 TTCATGAGTGAAGATTATTGACATCGTTGGTAAATTCTAGAATTTTGATTTTGTTTTTTAATTTGAAGAAAATC 5994
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5995 TTTGCTATTATTATTTTTTCCAAGTGGTCTGGCATTTTAAGAATTAGTGCTAATAACGTAACTTCTAAATTTGT 6068
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6069 CGTAATTGGCATGTTTAATAGCATATCAAAAAACATTTTAAGCCTGTGGATTCATAGACAAAGCAATGAGAAAC 6142
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6143 ATTAGTAAAATATAAATGGATATTCCTGATGCATTTAGGAAGCTCTCAATTGTCTCTTGCATAGTTCAAGGAAT 6216
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6217 GTTTTCTGAATTTTTTTAATGCTTTTTTTTTTTTTGAAAGAGGAAAACATACATTTTTAAATGTGATTATCTAA 6290
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6291 TTTTTACAACACTGGGCTATTAGGAATAACTTTTTAAAAATTACTGTTCTGTATAAATATTTGAAATTCAAGTA 6364
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6365 CAGAAAATATCTGAAACAAAAAGCATTGTTGTTTGGCCATGATACAAGTGCACTGTGGCAGTGCCGCTTGCTCA 6438
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6439 GGACCCAGCCCTGCAGCCCTTCTGTGTGTGCTCCCTCGTTAAGTTCATTTGCTGTTATTACACACACAGGCCTT 6512
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6513 CCTGTCTGGTCGTTAGAAAAGCCGGGCTTCCAAAGCACTGTTGAACACAGGATTCTGTTGTTAGTGTGGATGTT 6586
Query 283 ----------------------------------------------------------- 282
Sbjct 6587 CAATGAGTTGTATTTTAAATATCAAAGATTATTAAATAAAGATAATGTTTGCTTTTCTA 6645
