Nucleotide Global Alignment
Description
- Query:
- TRCN0000469746
- Subject:
- NR_033711.1
- Aligned Length:
- 6419
- Identities:
- 249
- Gaps:
- 6147
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTTGTTGCGGGATCTCACAGGCTTTAAACCGCGGCGCCGCGGCGCCCGGGTGTGGATCCCTAGATGGGAGCCGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGATGGGCCGGGTGCCTGGTGGGTGGCAGTCGGGGCTGACGGCGGCGGCACTTTGCCGCCTCAGGCCCTGGACA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCTTCACCCCGCCGCCTGCCCAGGCGGGCCGGCCCTGCCCGTCCACCGGCCGCCGAGAGTCCCCGGCCTTGGGT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCCCGGGGCCGCTGACTGGCCTCGGTCACCTCCCGGGGAAGGCTCCCGCGCCTCCATCTGCCCCCGCAGGAAGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GACCCTCTTCTCGCCCGCGAGGCTTCTCCGGGTGGGATCGTCCTGGCCCCCAGCCCTAAGGGATCCGCCCCCTC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CGAGCATCCGCCGCCCCTCGGAGACCACTCCAGCTCGGACGGACCCACTCCAGCCCCCGCTGCACGCGGAAGCG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CTCATCCTCCCCGCCTGCCCCGTTCCCTCCCCCTTCTCCTGTGGGACAACCAGGGACCGCAGCTCCCCGCTCCC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CAGGTGTGGGGGCTCCGACACGAACGCCTCTGCTCGCAGGGCGGTGAGCGCAGATCCCACGGGTCCCTCGGTCG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGGGTCGAGGCTGCTTCCGTTTCCATCCCGGACCCGACAATGGGCGGGAAAAAGAAGGCTTTACACGACTACGC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GGCGGAGTTCACCGACCTGGTGGTGAAGCACCTGATTGAGCACAGTGACTCTGGGGACACGTCTGTGGTGGAGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CCCTTTACTGCAGGGCCTGCGAGCTGCCCGTGCGCGTGCGGAGGGACCGCATCCTGGAACACCTGTCCTCGGGC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AGGCAGCACGGCCTGCGGACGCCCATTCTCATGTAAATGTCAGTGCCAACGCTGGTGTTTCAGGAGTCATCCCA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GCGGGCTGCGGGCTATTTTAGGATTCTCTGCCCTGCAAACGTTTCCAAAGTACGTGGACAGGCCGCCTGATGAC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 ACTACGTTTACGGGATCTGCTAGTGGCTTGCCTACTTAGGGAGTAAACCCTGTGAAGTCTCGCAGTTTTGTTAA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AGTGTGCGTGGCCACCTGAATGCTGCCTTATCACAAGCCAGATACATACTGGTCTGTAGGGTAACTCCCCACTG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TTGATCCTCTGAGATGATTGTGGACTGGGTGCTGTGAGTCCTGCCACTTTGTTTAAGTGAATGTGTCTTTTGTC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CAGCTCAGCCGCCTCGGATCTCGCTGCCACCAGCCTTACTGCACACCCGTGCCACCCGCCCTTGCCCCGTCAGC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CTCAGCCTCAGCTCATTCTCTCAGGCAGTCCCAGCATTGGCACGGTACCTCCTCCCGCTGTGGGCCACACGTCT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CTGCTCCCTGTCAACCCTCCTGCCATCAGCACCACCACCAGCGACTTGTCTGCCCGGGAGGATGCAACACCATC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TGCCTCCACCGGCCACCTTTCAGTGTTTCCTGCTTTCCAAGTAAAGATACCAGCAGTGCCCTCAGAGCAGACCA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GCCAGAGTTTTTCTGAAGCCTCCCACAGGGTGCTCCCCGGAGGAGGCCCGAGATGCTCTCGTGACTTTGGAGCC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GGGGTGGCTGGCCACCTTGGCCTGGGCATCTTTGGGGTGGGCTTCGGGAGCCCGGCACTGCTGCAGAGTGTGGT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GGATGAGAACAGCTGCTGCTTGCTGTACGTGGTGGAGGACCAGCTGTGTGATGTGGAGCAAGCCTTCAGAGCTG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AGCATTTGGGCCAACACCAGAGTGGTTCGGGAACAGGATGCAGACATTGTCCTCAACGACCAGCGGCACTTTGA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TCCGGTTTTCCAGTTCTTGCACAAGCAAGTTTGTGTCAGCCACGCCCTGGGGAGGATCCACTGGATCACCGCCG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TCACTGCCTGTTCCCGGCGGCCTCTCCGGCTTCCCTAAAGAGAGCAGGTGGGACTTTCTACAACGCTGCTGTGC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 ACGACGTGGATGCCGTATGCATGTTGCTGGGGGAAGCCACTCCGGACACTGTGTTTTCTCTGGGACATGTCTTC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TGCCCAGATATGGCCGCCTTAAAAGATGCAGATGCTGTTGTGATCAGCATGAAGTTTCCCTGTGAGGCCGTGGT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TAGCGTGGACATCAGCCAGCACTGCACAGACAGCTGCGACCAGGACGTCAGCCAGCACTGCACAGACAGCTGCG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 ACCAGAGACTGGAGGTGACCCTTGCCCTTTTCCACCCTTCGCCAGTCCACTGTGAAAAGCTGGGTTGATTGTGC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GGGTTAGATAGAGGTCATCAGCCGGGTTGATTGTGTGGGTTAGACAGAGGTCATCAGCCAGGTTGATTGTGTGG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GTTAGATAGAGATCATCAGCCTGGTAGATTGTGTGGGTTAGATAGAGGTCATCAGCCAGGTTGATTGTGCGGGT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TAGATAGAGATCATCAGCCGGGTTGATTCTACAGGTTAGATAGAGGTCGTCAGCCGGGTTGATTGTGCGGGTTA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GATAGAGATCATCAGCCGGGTTGATTGTGCGGGTTAGATAGAGGTCATCAGCTGGGTTGATTGTGTGGGTTAGA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TAGAGATCATCAGCTGGGTTGATTGTGTGGGTTAGATAGAGGTCGTCAGCTGGGTTGATTGTGCGGGTTAGATA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 GAGGTCATCAGCCGGGTTGATTCTACAGGTTAGATAGAGGTCATCAGCTGGGTTGATTGTGCGGGTTAGAGATC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 ATCAGCCGGGTTGATTGTGCGGGTTAGATAGAGGTCATCAGCCGGGTTGATTGTGCGGGTTAGATAGAGATCAT 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 CAGCTGGGTTGATTCTGCAGGTTAGATAGAGGTCATCAGCTGGGTTGACTATGTGGGTTAGATAGAGGTCGTCA 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 GCCGGGTTGATTGTGTGGGTTAGACAGAGGTCATCAGCTGGGTTGATTCTGCGGGTTAGATAGAGGTCATCAGC 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 TGGGTTGATTGTGTGGGTTAGATAGAGATCATCAGCTGGGTTGATTGTGTGGGTTAGATAGAGGTCATCAGCTG 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 GGTTGATTGTGTGGGTTAGATAGAGGTCATCAGCTGGGTTGATTGTGTGGGTTAGATAGAGGTCATCAGCTGGG 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 TTGATTGTGTGGGTTAGATAGAGGTCATCAGCTGGGTTGATTGTATGGGTTAGATAGAGGTCATCAGCTGGGTT 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 GATTGTACGGGTTAGATAGAGGTCGTCAGCCGGGTTGATTCCGCAGGTTAGATAGAGGTCGTTAGCTGGGTGTG 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 TGGGTCCCAAGGCGTGCTGCAGATGGAGAATCAGAATTCCTTGGGCATCACCGGGCGGGGCATGTCCCTGTCCC 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 TTCGCTCCCAGACCCAGGCTAGCCGCTACCAGGACTCCTATCGAGAGCTCTTCAGACACTTTGTCAGAACCCTT 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 AAAGGTGGGTGACGTTTTCAGGAGGAACCTGGGATGTCCTGATGCTCAATGGGTAGATGCCTTCCAGGCTGCAG 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 TCAGTGCAGATGATATGCCAATTTCAGGTGGAAAATTGCATTCCAGATACCGGGTTCAGATTTGAAATTGTCCA 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 TCTCAGTGATCATTTACGTTGCGTGTACTTGAGGGAGATTCTGAGAGATGCTCCTTTGGGGTTCTGTGCGTGTA 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 CCATGTTGCCTGACACGTCCTGAGAAATCTTCTTAAACTCTGAGTTTATAAAATAACTACTTCTGAACTCCTGA 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 GATCTAGTGGATACCATGTATCCTGGAAGATAGGACACTTTCTACCCTCTGTCAGTCCTGGGGGTGACTGGGAA 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 CCAGAGAGGTTGAGCAGAATTCCTGGACCTGGGTGGGGCTTGTCCAAGAGGGGCAGGTGGGCCTCTCTAGGATC 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 AGTGTCCCACCCAGAGGCCAGTGGCCCCTTCACATGCCCCAACAAGAGGAAGACTGTCTGGCTCCGCAGTGTTG 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 GGTTTTGTCCTGAATCTGTGCAAATGTGCAGGGAAATAACCTCCTGAAATCACCAAAGAGCAGTTCCTCAGGGC 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 CTTCCGGGTGACCGTGGCCGTGGAGCAGTCGTGGTGAAACCGGTCAGCTGTGGACCTGCCCTGCGAATCGGCAG 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 AGGCCTCCGTGGTGAAGACAGAAGCTCCGTGAACCAACTCGAGGCTGGAGCCAAGATCCTGCCTGATATCCAGT 4070
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4071 TGCCTGTTTCACTTGTTACTGTTACTGGGAGAGGGAGACAAAACCTCATGGCAATCTTGTCCTCACTGGAGACT 4144
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4145 CAGAAGGGGAAGCATTGGGAAACCATGTATGTTTCATTTCTGGTTTAACCAGGCTTTTCAGGATGGGACTTCAG 4218
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4219 ACCAAGGACACAAGTTGGGCTTGCTTAGGTGTTTTGTGTTGTGCGCAGGCCTCAGAGATGCTCTTCCGGTCAGA 4292
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4293 GTTCCCTTGGCAGGGCCTTGGAGGCCTCTGGTTGGCTCTCTCAGGAAGAGGGCAGGTCAGGGATTGGGCGGTGT 4366
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4367 AAATTGACTCAGAAACCTGCGGTTTCAGCTTTTCTGTGGCAAACAGGGCCGAGGGCTGGTGAAGCTGTTAAGGC 4440
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4441 TAAATGTCGCATGCATGAGGCGGGCTGCAGGCCTCCTTAGGCCTTTTTTGGGGTAATTACACCAGTATTTAAAA 4514
Query 1 ------------------------ATGGAGTCTTGCTCTGTCACCCAGGCTGGAGTGCAATGGCGCGATCTCCA 50
||||||||||||.||||||||||||||||||||||||||.||||||||..
Sbjct 4515 ACATTTTTTTTTGTTTGTTTTGAGATGGAGTCTTGCCCTGTCACCCAGGCTGGAGTGCAATGGTGCGATCTCGG 4588
Query 51 CTCACTGCAACCTCTGCGTACCAGGTTCAAGCGATTCTCCTGTCTCAGCCTCCTGAGTAGCTGGGATTACA--- 121
||||||||||||||.|..|.||||||||||||||||||.|||.||||||||.|||||||||||||||||||
Sbjct 4589 CTCACTGCAACCTCCGTCTCCCAGGTTCAAGCGATTCTTCTGCCTCAGCCTTCTGAGTAGCTGGGATTACACGC 4662
Query 122 -GGTGCCCACCACCACAGCT-GGCTAATTTTTGTATTTTTAGTAGAGACTGGG-TTTTACCATATTGGCCAGAC 192
.||| ||||||| ||| ||||||||||||||||||||||||||| |||| |||.|||||.||||||||.|
Sbjct 4663 GTGTG-CCACCAC----GCTCGGCTAATTTTTGTATTTTTAGTAGAGA-TGGGATTTCACCATGTTGGCCAGGC 4730
Query 193 TGGTCTCGAACTCCTGACCTCAGGTGGTCCGCCTGCCTTGGCTTCCCAAAGTGCTGGGATTATAGGAGTGAGCC 266
||||||||||||.|||||||| |||.|||.||||||.||||.|||||||||||||||||||.|||.|||||||
Sbjct 4731 TGGTCTCGAACTACTGACCTC--GTGATCCACCTGCCATGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCC 4802
Query 267 AC--TGCGCCTGGCC---------ATT----------------------------------------------- 282
|| |||.| |||| |||
Sbjct 4803 ACCATGCTC--GGCCTAAAAAACAATTTTCTTGAAGAATCCGATTTTGTGCATAGTAATGACACAGCACCATTC 4874
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4875 CTGAGAAATAGGAAATATATGTGTGTGGTATGAAAAGCCCATATTCTGTTCTTGTCACCTGAATCTAGGCTTCC 4948
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4949 TCTTTGGATGTGAACGCGGGAATGAACAGTGGCTGTTTTCCACCCAAAGGGGCGTGGAGACCTTTTGGAAACGG 5022
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5023 GCTTTCTCCTTTCCATTTTGCAGCCGGGGGCGGGTGGAAACCTTCCTTCGAAGGGTAGTGCCTTGGGGAGCAGC 5096
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5097 AGACCTGCTCTGAGTCCAGCTTAGCTTTCCAAAATTCTGTGTGGAACTTACTGGAGATGTTTTTATATATTTGA 5170
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5171 AAATAATGGCCTGTATTTCTCACGCTATACTTAAAAAAAATAACTAACCTTTTAAACAAAGATATTCAAACTCA 5244
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5245 CCCTTGTGCTGAAAGCACTCACATTTCTGTGTTCATTCCTGAAAGGGCGTTTTAGAGTCCCCGTTTCTACGTTC 5318
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5319 TATGTGGCACCCTCTTGCCGAGGGAACATCCAGAATCCCTCCACTTCCTGTCTAGTTTGAGGCCTCAACACCTT 5392
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5393 CATGATCCAGAGTCCTGCGGCTATGAGGGGGTGGGCCCACCACCGCCCAGCCCTCCTTGGTGGACGTGGGGACA 5466
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5467 GGTAGGAGCCTAGGGAAAGGGGTGGGCGGGCTCTGGTGTGACGGCGTGAGCGCTAGCCAGGAAGATGGGGCCAG 5540
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5541 GGCTTGGCATGGCACCTCACCTGTGGGGGAACTCGGCGGAGCTTCCTGGCGGCATCTCCCCCTCTTGCCTTGGT 5614
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5615 CCTTTCTATCTTTGTTTTAGGCCAATTTCTAAAAAGACTGAGGCCTCCTTCAAGGTTGAACAGATTTCTAGAGC 5688
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5689 CTTGTTTTTGCTGTGACAAGTCCCTAGTCCCTGTTCACAACTCTGAAACCAAGAAACCTGAGAACCAAGAGAAC 5762
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5763 TGAAATGAAGCCCGTTGGTCTCAGCCTGGCTTGAGCCAACATGAGGCTCTCTGCTGCCTTTTGTTTTCTTAGGT 5836
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5837 TTTGCTGAGAAACGGGAGTGCGTTCTGTGTCGGTGTTTGTGACGCCCTGAGACCCTGCTTGGCCTAGCTAAAGT 5910
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5911 CCAGAAGGCCTGGGCCCCACAGGGCTTGGATGAGGGCTCATGGGCCTGTACTTCAGGAGGCCTGAGAGGCCCGG 5984
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5985 TCAGTCCCATGAGGCTACTCGGCTTGGCCCGCAGGTCCTCCGAGGCACAGGGCAGAGGGACACCCCAGGGACCC 6058
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6059 ATCAGACTCACGACACAGAGAAACTCAAGTGGGGTGCCAGGGCCGGCCACAGAGGCCACGGGCTTCCTGCCTGT 6132
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6133 GAGGAGCCGCCCTGTTTGTCTGAGCCCTTTGGAGATTTAGGTTGAGTCATGAGAACCGGTCATTGGAACATACA 6206
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6207 CTTTATTATGTTACAAAAACAAAAATCCCCACTGAAACACAGCTAAAAAAATAACACATTTTCCCAAGATTACA 6280
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6281 TTACCAAAAACAGTTGTTATGTCATTGGAGGGCGTCCATTAATACTGCTCGGAGAAGCACGATCTTACACGAAA 6354
Query 283 ------------------------------------------------------- 282
Sbjct 6355 AACACGGATGGGATTTCGTTTTCACCTTAAAGCATTAAAGTGCTTTAACTGGTAA 6409
