Nucleotide Global Alignment

Description

Query:
TRCN0000469746
Subject:
NR_049741.2
Aligned Length:
5563
Identities:
240
Gaps:
5288

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AATGCTGAGACAGACTCCCAGAAGATCTGAGCGAGTCGCGTAGCTGAGCCCGGCAGGGGCTGGGGTGGTGCTGC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TGCTATGAGCTGCACCATCGAGAAGATCCTGACAGACGCCAAGACGCTGCTGGAGAGGCTACGGGAGCACGATG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CGGCCGCCGAGTCGCTGGTGGATCAGTCGGCGGCGCTGCACCGGCGGGTAGCAGCTATGCGGGAGGCGGGGACA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GCGCTTCCGGACCAGGTCAGGCAGAGGGTAGGAGTCCAGTGCTCTCGGATTCTGGGCACTGAAGGGTGGAGAGC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GAGTATCAAGAGGATGCATCCGATATGAAGGACATGTCCAAATACAAACCTCACATTCTGCTGTCCCAAGAGAA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CACACAGATTAGAGACTTGCAACAGGAAAACAGAGAGCTATGGATTTCCTTGGAGGAACACCAGGATGCTTTGG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  AACTTATCATGAGCAAATATCGGAAACAGATGTTACAGTTAATGGTTGCTAAAAAAGCGGTGGATGCTGAACCA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GTCCTGAAAGCTCACCAGTCTCACTCTGCAGAAATTGAGAGTCAGATTGACAGAATCTGTGAAATGGGAGAAGT  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GATGAGGAAAGCAGTTCAGGTGGATGATGACCAGTTTTGTAAGATTCAGGAAAAATTAGCCCAATTAGAGCTTG  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  AAAATAAGGAACTTCGAGAATTATTGTCCATCAGCAGTGAGTCTCTTCAAGCCAGAAAGGAAAACTCAATGGAC  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  ACTGCTTCCCAAGCCATCAAATAACTGAACTCTGAATGATGGCTGGAGATTGTCTATCAAGGAAGGAAGTTACT  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  GTCTTCCCATTCAAGTACTGTCCATTAAGTGTCTTGCCTCAGATTTGATTTAATCTTAATTAAAGGTATCAGGT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  GGCAATTTAGAATTCCAGTCAATATTGGCTGTCCACAGTTCTCAGATGTGTTAATGTGAATACTACATGCTGAA  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  TTTCACCATTCCTTTCTCAAAGAGACTACTTTTAATTTTCATTTCTGGGACCTTGATTTATATAAACTATGTTT  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  TCAGTTCTTTGTTATTTTTCACATCTCTGAAACTTTGAGCATTTTTTATAAGCCAGCAATTTATTTTACATAGC  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  ATTGTAAAATACACTTCTAGGAAATTTTAGGAAAGATTTAACTGTTTAAATCTATTTGGCATAAACCTTGATTT  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  TTTTTTTCCATTTGACAAAAATAATACAATTCCACAGAACTAGATCAGCAGATTCTCTGATTTGTAATGTCATT  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  CACCTGTGACATTTTAAGTCTCTCTGGTGCTAAGAATTGGCACTTTATAGCCTGGTGCCTTTACTTTTAATTTG  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  AGAGAACCTACTGCTAGTCCCAGGAAACACACTTGGAAATAAGTCAGCTATTTTTTTTGCCCAGTGATGCTATA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  GTTGTCATATTGTCCAAAGTTCATATTGTTCAAAGCTGAGGAGCTTGTCCTGTGTATGTGAATGCACACATGTG  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  CACTTAGTTCAAATACTAAAAGTAGCTTTTATTAAATATAATCAGCCAAAAACACACACAAAATAAAAAAAACA  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  AATATAAGTAGTCAGTTTTTCAATGTTATCCTACTAGTTCTACATTCTATTTTAATTTTTATACAATTTCCATT  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  TTATAGTTAAGAACCATCACTTACTTGGATTGGATGTCTTTCATTCCTAGCACTAATAGTTGGCTTTCTTTTTT  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  TTTGTTTACATAGAAGCAGGGTTTTTTTTTATCTTTTTTCTTTTTTTTTGTTTAAGCTATATAAAAAGGTGAGG  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  AAGCAGTTTTGTTACCTAATGAAAATTATTACACTCATAATGCTGTGTAGGCAACATTGAGATTCAAATGCCCA  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  GTGGTCAACTGGGTTCACTCATCAACTCATTCCCGTCCCAGTTTACTCACATTTCAAATTTATAAATTTCTTCA  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  TGTTATACTATTCTATTTAGATTTGCCCAGAATTAGTTGAAATAATGCTAAACCTGTCAATATTTTCCAGTAAC  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  ATTAAGCACCATACTGCATGGGAGAGACACAGTACTAAAAAGAGTTGTTAGTGCTTTATGTGAGTGATATTTCT  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  TTCGTAATGCTATAAAGAACTACAGTTAAAATAACAAAATATTTTAAAGATGTCCTAAAAGCATCTGATCCCAG  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  TAATAACTAATGGATGTCATCTAGAGCAGTGGGTGTTAATGAATAGGTATATGTCATTTAAGAATTTTTCAAAT  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  TTCTGTTTGATATCCTGCATAGAATTTGACAAAAAAAACACTTCCAAGTGTGAGCATTTTTTATTTCATTTCCC  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  AAGAGTAAGTAAGTAACTATTAGCCCAGCCATCTGCCTCGAAGTATACCTTAAGTGACCCCATAAATCCATTCA  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  AGAGGCAGGTACTCTATACCATTTGGCAGCCACGGCCAAACCTACCATGGCCAGATTTCAGTGAAAATGATGAA  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  GTAATCAAATCAAGGTATAATATGGTGTCCCTTTATGTGCTTTATGTTCCTTTAGAGCTGTTTATAAAGTTCTT  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  TATATCTCAAGTGTTAGGATAAATCGACATACTAACTTTTCCCCCTGCAAAATTAAAAGCCTGAGGTACAAGTC  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  TAAGAAGCTTTTAGTGCTCTACATAATATAAATTCTGGCTGGTGTTAATGCTATGAAGATAATATGTAGTTAGA  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  AAATTGAGTCGGGGAGGAATGCTCTTCATTTTAAGTGGATTTTAAAGTTTCTCCTTGAGTGGATGAAGAACTTG  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  CCTGGTTTGCAAAAATCTTAGTTCAAAATTATATTTTCTAACAAAAACTGCATTTTGAGAAGATAAGCTAATTT  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  TACTCAGTAGTAAGTCAAATGAGGAAGTGCAGAGGGTTTTTTTACATATATATAGCAACCTTGTCAAGTGGTCC  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  TCACAAGAGTCATAAATACTTTGTAATTAGCACAGTATATTCAGCAGTGTATAACTCTACAAATAGTACCTTAT  2960

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2961  ATTAGTGTAGTATTATATCAATATCTTATGTATAATTCTTATATTAATACCTTATGCATAATTGGATTCAAACA  3034

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3035  TTGAAGGTCTATTTTAGTGTTCTTCAAAATGTGCTTCCCTGACCTACTGAAATAGAAACTTGGTGATGAAGTTC  3108

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3109  AAGAATTTGTATTCTAATCATCTCAAACAATTCCTAAAGACACTGATTTTAAAATATCTAGTCTAGGCCCCATT  3182

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3183  GTGTAATAGTTAGCACTCTAAAAGATGAAAAAGAAAATAGTCTATGTGCCAACCACTTCATTAGTACTTATGAA  3256

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3257  TTTAAAAATGAAAAAGTCTGGTACAGGAGACAAGTATATATATAAAATTATAATGCAGTGTGATAAATCCATTA  3330

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3331  TAGTATGTATAAGATACAGAAGAGGGACTTTAAACTTGAGAATTCAATAGAGATAATAAATGGGTAGGAGGGAA  3404

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3405  ATAGAAAACTTTGGTGCCACAAAAGCAAAGTATGTATGGTATTGCCAATAATAGCTACCATCTATTGAGTGCTT  3478

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3479  TACTACCTGTCAGGTACTGTATTATATAAACTCCATTTTAACTGTACCTCATTTTGCAGATACTCAGGCACAAG  3552

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3553  GAGGTGGTTATTTGTCCAAACTGGAACCAAGATTCAAACCCAGACAGAGTCTTAAGCACATTTTTAATCACTAA  3626

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3627  CTAACTTGAGATGCCTAAATGCCAAATACTGTTGGGAGTTCAAGTGGTTCTTGATTAGCAAAATCTATTTTTAT  3700

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3701  TAGTGCAAAAGAAACACCACAGCTTATAAAGTATTATGAATTCAATAAATGGAGTCTTAACTAATGAGATATTA  3774

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3775  TTTTCTAGAATGGTGTAGCTGAGAGTATGTGTGATTCAACTGAAAGGAATAATGTTTAATCAGTGACTCTTACT  3848

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3849  ATATACAGGAAAAGGTGCAGTTCTGTCTTTCAAATCTGCCTCCTTACCATATTGGCTTACATCCCTCATGCTGT  3922

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3923  TTTCTTGTGTTTGCTAGAAAGTTGTTGCCAAGCCAAATGTCATGGCCATGTTGAAGGCAAGGAAGAAAAAATGG  3996

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3997  AAATGGCCTGTGCCAGCTATATATATCGCCTTTTATGAGGGAAAGCAAAGCTTTCTCAGAAATCCCAAATGGAT  4070

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4071  TTTCCCTTGACTTAATTGCCTGACCAGTTAAATGGCCACTGGTACCTGCAAAGAAAGCAGGGTACATAGCTGTC  4144

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4145  CCAAATAAAATCAGTATTAGCAAGAAGAAAGAATATTGAGAAAGCAATTAACAGTGTCTGTGACTGTGACATGT  4218

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4219  CTGTGACTTTATATTGTCAAGTCCTTTCCCCTTGAATATAGTTTTGGAAGAATTAGCTGAAGGAGTGTGTTGAC  4292

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4293  ATTGAATGGCCAAGAGAATGGGCTGTAGCAGACATCTGTCATTTCTCTTTTGGCTGCCCAGTATCCTAACTCCT  4366

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4367  GTGTTTAAGGAATCCCTCACCTAATGAGGCAGAGCATTTCTTCCTCCTAAAGAATTTGAAAGTACCAGGTAATG  4440

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4441  TTTTCTCAGCCTCCTTTTGCAGCTAAGGAAGAAACATCTGCCTTCAATTTTAAAATTAGTGATACAAAGAAGGA  4514

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4515  GGGAACCATGCAGATTCCTTTGAAGATGGTGATTAACAACACTACTGCATTCATCTCCACAGAGGTACAGCAAA  4588

Query    1  -----------------------------------------------------ATGGAGTCTTGCTCTGTCACC  21
                                                                 |...|||||||||||||||.|
Sbjct 4589  AGTGATTTAGTTAGCGATAACCTCTAATTCTATTTTTTTATTTTTATTTTTTGAGACAGTCTTGCTCTGTCAAC  4662

Query   22  CAGGCTGGAGTGCAATGGCGCGATCTCCACTCACTGCAACCTCTGCGTACCAGGTTCAAGCGATTCTCCTGTCT  95
            ||||||||||||||.|.||.|..|||..|||||||||||||||..|.|.|..|||||||||||||||||||.||
Sbjct 4663  CAGGCTGGAGTGCAGTAGCACTGTCTTAACTCACTGCAACCTCCACCTCCTGGGTTCAAGCGATTCTCCTGCCT  4736

Query   96  CAGCCTCCTGAGTAGCTGGGATTACAGGTGCCCACCACCACAGCTG----GCTAATTTTTGTATTTTTAGTAGA  165
            ||||||||..|||.||||||||||||.|||||||||||||    ||    ||||||||||||.|||||||||||
Sbjct 4737  CAGCCTCCCAAGTCGCTGGGATTACAAGTGCCCACCACCA----TGCACAGCTAATTTTTGTGTTTTTAGTAGA  4806

Query  166  GACT-GGGTTTTACCATATTGGCCAGACTGGTCTCGAACTCCTGACCTCAGGTGGTCCGCCTGCCTTGGCTTCC  238
               | ||||||..||||.||||||||.|||||||||||||..||||.|||||||.||||||.||||||||.|||
Sbjct 4807  ---TGGGGTTTCTCCATGTTGGCCAGGCTGGTCTCGAACTTATGACTTCAGGTGATCCGCCCGCCTTGGCCTCC  4877

Query  239  CAAAGTGCTGGGATTATAGGAGTGAGCCACTGCGCCTGGCC-----------ATT-------------------  282
            ||||||||||||||||||||.|||||||||||.||||||||           |||                   
Sbjct 4878  CAAAGTGCTGGGATTATAGGCGTGAGCCACTGTGCCTGGCCTGTAACCTCTAATTCTTGTTTGCTGGCTGTCCT  4951

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 4952  AGAGATCCTGAGAATTACTTTTAATAAAATCATTTTTTTGCTGTTATTAAAACTAACCTGAATTGCCTAAAACC  5025

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 5026  AAGAACTCTGCTTGATAAAATAAGCATAGTTTTAGGAACAGCCATGCAGATATAAATTTTATCAACACTTTATA  5099

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 5100  CATAATTTGGGACTTATATTTAAATGTAATATTTGATGCTTATAAAAGGGTAAATGGGGAATGCAAATAAATTA  5173

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 5174  TCAAGCATAATAACTCATCACCTAACTTAAGAATAACATTATGAGTGCTTGTATTTTATCTATTTGAGCTCTTC  5247

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 5248  TCCTATCTTTGCCGACCCCCCCGCTCTCTTTTTAATAGATTTGTTCGAATGTAGAAAGACCTAAAATACATATG  5321

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 5322  TATCCCTAAAGTGACTTATTTTATAGTTTTCTTTCTTTTTGAACTTCAAAAAAATTGTATCATACTCTATGTAG  5395

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 5396  TCTAAGGATTTGGTTTTTTTCACTCAACATGTCTCTAGAATTCACAAGTTTTATTGTTTTATAGCTGTCATTTT  5469

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 5470  CATTGATGTATATTTCATTGTTGGGTTATACAACATATTGTTAAGGAATACATACATATATAATAAATTATACA  5543

Query  283  -------------  282
                         
Sbjct 5544  TTTTTTAAAAAAA  5556

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