Nucleotide Global Alignment
Description
- Query:
- TRCN0000469746
- Subject:
- NR_049794.1
- Aligned Length:
- 4392
- Identities:
- 247
- Gaps:
- 4114
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTATCAACTCCATCTGTCACAAAAATTAAGGCTAAATCTCCTCTCCAGAAGCAGAGGGAGCCGGGGCTCCGACG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGCTCAGCGTCGGGCTGTCTGCCTCTCCCTAGAGGCCAAGTGAATTTGAAATGGCAAAAGTCACAGCCGGAGGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCAGCACTAGGAGATTCCTCCGGCTGCGGGAAATCTTCCTGTACCTGCTGAAGCTGCTGCGTTCCTCAGAGGCG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CTTGGTCTGCCGTGGGAAGCTGCACCTCTGCAGTCCCCAAAACCAAAATCAAACCTTAAAAGAGCCAGACTGAG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AAGCCAGTCACCACGTAAGACATCTGGACCACCTTCAGACTCGCATGCTGTGAGGAAGCCCATGCTTACTATGT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GTAGAGGATACATGGAGAAGGAAAGAGATGCCTGGCCAGCTCCCTGCTGTTTCAGCCATGCAGAGGTGCTGAGC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AGCTAATTGGAGGGGATAGTATGAGCCTCCAAAGATTAGGGAAGAAAATTGCAGTTGAAGAAAACTTGCTTTGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TTCAATGCAAAAATAATGGGATGAATGGCATGCTGAAATATCATATGACTTACGAAAATGATGAATGGTTTATT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GAATCTACATATGTGGAACCCATGAATGGGAGTCGGAGAAGGGGGCAACTGTATACGCAAAAAGCTATCATAAT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TGCCAAAATAGTGATAACAATGTTGAAACACTACTGGGATTACTACTGTTAATGACTACCAGTGATCAAGCACC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TCCCCTGCCCCAGTGTTTGCCTGCCTTGTTTGAAGACACGAAAAAATGTACACAAAATGATTTAGAACTGTTGA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ACTTTTCAGAAAATAATTTAAAATCATCTACCTCATAACTAAAGGACACTGAATTGGAGCCAGCTGATGTAAGG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AGCTTACCTTGGTTGCCACCTTCTGGTCTCTGTTTGAGGAACAACTGCATGTGATTAAGGATGAAGAAACTGAG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 ACCCCAAGAATTTAAGTAATTTGTTCAAGGCAACACACTGCTATGTGGTAGAACTACAAATTGAGCCCAAATAA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TCCAGCTTCAGATACTATGCAAAGGTATCCTAGGTGTGGGGGTGATAACCTGGTGACAATCCCTTCTCAGAAGG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AAAACAGGTCCCATCTACAGAGGTGAAGCAGAGTGTGGAACTGAAAAACTCAATGGAAGAATGGCTATTAAGAT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TTAGGACGGCTGGGAAATAATAAAGTAATAATAATAATACTAGGTATTGACGTGTGCTACATGCCAGGCCTTGG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GTGACATTTGGATTGATTCCCATTTTCTTTACTTTTCAGCAGTGGGGTCTTTCACCTTTCAAGCTCTGCCTGAG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AAGTCAACATGGTGGCATTTGGCTAGGTTCTTTTAGGCAACCAATTGTTTTAACATGATTTGTTGAAAAGCCTA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TTCTCTCTTTCATTGAACTATAATGCTAGCTCTGTCATAAATCAAATTTTCATTTGATTTATGATATGAAAATT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 ATATGCATTTGATTGATATGCATTTTTTCTCCAATGATACTCAACTGTCTTAATTATATAATTTTGTAGTAATT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CTTGGTATCTAATTAGGCAAATACCCACTCCCAACCCTGTTTCTTTTGTTTTTAAATCCAGGGGTGTTTTGGAT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 ATTCTCGTTCATTTGTGCTTCCACCTACATTTTTCAGTTAACTTGTCAGGTACGAAAAAATAAAAGGCAAAATT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TTTTATCCTTAAATCAATTTGGGCAAGTTTGCAGTTTTTTCTTGTATTGTAACTTCCAATCTATGAATATGATC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TATTTTTTCACCAATTTATGGCTTCTTCCAATAACATTTTATAATTGTCTTTTTAGAGGCCTTATCTTTTGTTT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 AGATTCATATCTAGGTATTTAATATTTTTGATGCTGTTATAAATGGTATTTTTAAAAATATATACATTTTTAAC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TATTTCACATAGAAAACTTTAATGGATTTTTAAAATGTAGATTTGTATTCAGTAAACCTGTTAAAATCTCTTAG 1998
Query 1 ---------------------------------------------------------ATGGAGTCTTGCTC-TG 16
|.|||||.|.|||| ||
Sbjct 1999 AATGTCTAAGAGTTTATTTATTCAATTTGATTTTCTTTTTTTTTTTTTCTCCTGGAGACGGAGTTTCGCTCTTG 2072
Query 17 TCACCCAGGCTGGAGTGCAATGGCGCGATCTCCACTCACTGCAACCTCTGCGTACCAGGTTCAAGCGATTCTCC 90
|..||||||||||||||||.||||..||||||..||||||||||||||.|..|.||.|||||||||.|||||||
Sbjct 2073 TTGCCCAGGCTGGAGTGCAGTGGCATGATCTCAGCTCACTGCAACCTCCGGCTCCCGGGTTCAAGCAATTCTCC 2146
Query 91 TGTCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCCCACCACCACAGCTG----GCTAATTTTT-GTATTTTT 159
|||||||||||||||||||||||||||||||||..|||||||||| || |||||||||| ||||||||
Sbjct 2147 TGTCTCAGCCTCCTGAGTAGCTGGGATTACAGGCTCCCACCACCA----TGCCCAGCTAATTTTTGGTATTTTT 2216
Query 160 AGTAGAGACTGGGTTTTACCATATTGGCCAGACTGGTCTCGAACTCCTGACCTCAGGTGGTCCGCCTGCCTTGG 233
|||||||||.|.||||.|||||.||||||||.||||||||.||||||||||||||||||.||||.||||.||||
Sbjct 2217 AGTAGAGACAGAGTTTCACCATGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAGGTGATCCGACTGCTTTGG 2290
Query 234 CTTCCCAAAGTGCTGGGATTATAGGAGTGAGCCACTGCG-CCTGGCC-ATT----------------------- 282
|||||||||.||||||.||||.|||.||||||||||||| ||||||| |||
Sbjct 2291 CTTCCCAAACTGCTGGCATTACAGGCGTGAGCCACTGCGCCCTGGCCTATTCTACTGGATTTTCTATGCAATTG 2364
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2365 TGTTATAACTCATCATAAAGATAATTTTATTTCTTTTCCACAATCTTTACAGGTTTAATTTTTTTCTATGCCTT 2438
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2439 GCTGCACTCTCTATGATTTCCAGTATTGGCACTACTCTGGCCTTTGGTCTTTGCTCTTGCATCAGCCTTTCATA 2512
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2513 ATTGGGTATGTTTGTTGTAAGTTTTCTGTAGAGAGTCTTTATGAGGTTAAGAGATTTGTTTCATTTCTAGTTTA 2586
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2587 TTAAGAGATTTTATTATAGATCAATGTTAAATTTTATCAAAATTTCTCCATTGCATTTCTATTGAGATGATCAC 2660
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2661 ATGATTATTAAAAATTAGTATAAAGATTTATTATTTTGATATTTTAAAATCAGGTTTATTGAGGCATAATTTAT 2734
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2735 ATATAATAAAATTTACCCTATTAGAGTATCCAGTCCAGTAAGTTTTGGTAAATGTATGCGAATAACACAATAAA 2808
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2809 CAGGTTTAGAACTTTTCCATCACCACAAAAAGTTTATCAGGCCCCTTTGCAGTTAATACTCACCTTCTCTCCAG 2882
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2883 CCCCAGTAAACCATGGATCTGCTTTTTGTTACTGTAGTTTTTCCTTTACTTTGATTTTTTTGAGTGTTAAGCCA 2956
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2957 GCCTTACATTTCTGAGTTAACTTGGTCATGATATCTTCTACAAACATTAATGAATTTAGTATGATTGGCTGATG 3030
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3031 CCTTTGCTTTCCTATACTGTCCTTGCCTGGTTGGTACAAGGATTATATAATACTTATAAAGTGAGTTGAAGACA 3104
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3105 GTTTCCTCTTTTCACCAGCTGGAATAATTTATGTATTATTGAAATTAATTGCTCCTTAAATACTTGGCAGAATT 3178
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3179 CACTACAAAGGCACTTAATTCTAGACCTTTTGGAGGAAGATAAAATACTGATTTTTTAAATCATTATTTTATTT 3252
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3253 TTGTAATACAGCTTATTTTTCCAGAAACTTCTACTTTTCGTTTACATCTTCAAGTCAGATTAAAGTTGTATTAA 3326
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3327 TAACCCCTTATTATTTAAATCTCAGCAGAATGTGAAGTTATGTTCCCCCTTTGTATCCATTTTTTTCTCTAGAT 3400
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3401 ATTTTTCTGTTACCTGTTTTAAATTTAATTCCATTGTGGTCAGAGATAATACTTTGTATGACTTGCATTCTTTT 3474
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3475 ATGTATATTGAGACTTGTTATAAGGCACAGAGTATGGTTTATCTTGGTAATCATTCGTGGCACACTTAAAAATC 3548
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3549 ATGTGTTTTCTGCTATTGTTGAGTGGGATGTTCTGTAACTGTGAATTAGGTCAAGTTAGTTGACAGTGTTGTTC 3622
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3623 AAGTCTTTTATATTATTACTGACTTTCTTTCTACTCACTCTATCAATTAGTGAAAGGTGTCAATATTTCCAGTT 3696
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3697 ATAATCATGGATTTGTCTATTATTACTTTCAGTTAGAAATTTCTAGCTGAAATTATCTATTTCTACTTTCAGTT 3770
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3771 AGTGTTAGCTTGCTATATCTTTTTTCCATCCTTCTTCTTTTAACCCAATGTATCTTTATATTGACATTACATAT 3844
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3845 ATGATTTATATTATATTATGTTACTATATCTTGTATGCAGCATATATTTGGATCTTTTTTATCCAATCTGATGA 3918
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3919 TCTTTGCTTTTTAATTAATGTATTTAGATCATTTACATTTACTGTGATTATTAATATGTATTAAGTTCAAATCT 3992
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3993 ACCACTTTGGTATTGAATATCTAATTGTCCCATTTGTTCTTTGTTTCAAAAAAACTCTTTTTTTGCCTTTTTTT 4066
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4067 ATATCAAGTATTTTAAAATTCTATTTCATCTTCTTTGTTTGCTTATTAGCTATAACTTTATTTTGCTAATTTAG 4140
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4141 TGGTTGCTTTAGGGTTTATAGTAAACATCTTCAACTTATCACATTCTATGTTCTAGTCATATTATATTATTTAA 4214
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4215 CACATAGTATAAAAACTTTATTGTAGTATACTTTCATTTTCCTCCAGTAATTGTGCGATTCTTGTCATCTATTT 4288
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4289 TGCTTCTACATGTTATAAACTCTACATGATTTTGTAATATTTTTGTTTAAACAATATTTATTTAGACTTAATAA 4362
Query 283 -------------------------- 282
Sbjct 4363 TAAATAATAAAAATATATGCTAACCA 4388
