Nucleotide Global Alignment
Description
- Query:
- TRCN0000469746
- Subject:
- NR_073189.3
- Aligned Length:
- 6132
- Identities:
- 245
- Gaps:
- 5853
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCACAACACAAGGAGAAACTTGGTGTCCAGGGGAGGCCCCCGGCGGCTGGAGCGCGGCGGCAGCGGGCGCAGAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCCGGAGGGAGAGGAGGCGAGGGGCGGCCCGAGCGCGGGGCGGGAGCGAGGCCAGCGGTCATGTGCCCGTGCCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCTGCACCGCGGCCGCGGCCCCCCGGCCGTGTGCGCCTGCAGCGCGGGTCGCCTGGGGCTGCGCTCGTCCGCCG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGCAGCTCACCGCCGCCCGGCTCAAGGCGCTAGGCGACGAGCTGCACCAGCGCACCATGTGGCGGCGCCGCGCG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CGGAGCCGGAGGGCGCCGGCGCCCGGCGCGCTCCCCACCTACTGGCCTTGGCTGTGCGCGGCCGCGCAGGTGGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GGCGCTGGCGGCCTGGCTGCTCGGCAGGCGGAACTTGTAGGAACGCGGGGCTTCTTGGTGGGGCCGGAGCCGAG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ACCCAGCCGGAGCGAGCAACAGCCTACATCTGACCTCAGAATACCAGCCGCTCCGGCCTTTCTTGTGCTTTTGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TTTAATTTGGGGAAACTCATTTTTTCCCAGCTCTGAGCCCCAGGGGAGGCTCCTCTGAGGCTGGGGAGGCCTGG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AGGAGGATGGGTATGATTTAACCAGTCAATACTCAAAGATACAGGAGAGAGGGAACAAAAGACGCTTTATGGTG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GTTGAGATCTTCCCATGTCAACACGCAAAGGTTTTCCTCATCCTTTTTAATGGCTGCATGATGTTCTGTTGCTT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GGATGAACCAGGATTTCCTTATATGGTCACTTCCTTGGGAACATTTGCATTGTTTCCTGTTTTCTGGTTGGTGA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AAACCCTGTGTCCTTGGAGAAAGCTGGTTCCCGTTTTCCAGAGGGGGAGCCCAGAGCTTGAAAGGCCGCGGTTG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GCACTTCGAGAAGGAAGTGGAGAGTAAAGACAGCGCCTGGAGCGATCGTAGAAACACAGAATGGGACTGGGGAA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GCCCTTTGGAAATCCAGCTGCAGAAACAGACACCCCAATGCTATTTACATACAGCTCTATATATATAAAAAAAG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AAAATATGAATATTACGTATCAGTGCATGCCTTGTTGAGGACGTGGTTGCCTTCCTTTTCTGCACCTTGCGATG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TGAACTTTGATATTCTGTAATGTCTGGGGCGCCAGAAGAGAGATGCCTGCTGTGTACTTAGAAACTATTTGCAA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AGACTGGTGGGAATTAGCCCCAGCATCGGCCAACTGCCTGGGGATAGATGCTGGTGGAATAAGAGGTAACAGTG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CAAAAGGCATGATAGAAAAAAAAAGTGAGGACTTGGGACCGATTGTGTAGGGGCAGTCTGGGATGCCTCCATTT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CTTGACTCGTCCTAGCCTCTCCCTCTGTACTTACCTAGGTCGATCGCTAGATCCCACTGTCACGTCAAGAGAAA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TGGGATTTTTGTGTCTCTGGTGCTTCACTTAAAATTTTGCTGGTGCTAAGTGCGTTCCTGCTGGTGCTGCTGTG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GTATTCTGTTGACAGACTTGGAAGGCCAGGGGACAAGAGAGATTTCTATTTTGCTGTTTCAGATTCTTTTTTTT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TTTTTTTTAAGGGACAAGTTGCAAAAGTGCCACTTGAGAGTCTCTTCTCTTCTTCTACCTGGGGACGAATATCC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 AGAGGTGGTTTGGAGCAAACCTTGGGGTCTAGGAGGGAGGATGGCATTGAGAGGCTTGCTGGTTATGAGGCAGA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AAGCTGACCTCATGCATGACTTGGTTGCTATCTCCCCCACCCCCACAAAAGTGTCCTCGGAGTTCAGCCCACAG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CCTCCTCCACTCCCCAAGGGGATTTCAGGGTTTAGGTTTTATGGATTAAAGAGCCAAGAAATGGCTACATTCTG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TTCAAAGATGATTTATAACCGGGGGATGTTGTGGGAGGGAGTGGGCCATTTAAATGAAATGCACCAGCATCTCA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CTGATTGACAGAGGTCTGATTTTTTTCCCCCCAAGGATAAGCTACTATTTTCAGAAGTTTCTAGAAGGGCTAAA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 AAAAGATGTGTGCTGGACGGAGACTTGGCTGCAAAGACTCTTCAGGGAGCAGTGATTATTTTTTGCTTTCATTT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TCGAAAAATCCAACATAAGCAGGTATTCTTCCTCTGTGCAGGATACCACACACTGCCATTTTCAAAGCCGAGGT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 GGCGAGGTGTCAGGCTGCAGATTCGGACGGTCATTCTCCAAGGCTGGATTTGCAGGTCACCACCCGGTACCTAT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 AGACAGAGGGTCCAGCAGGCTGGTTAGCAGACACCGCTCCAGTTCTAAGACGCCAGCAGTGGGATCCATGTTTA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 AGGTGGATGCGGCTGAAATGGGAATTATCCCCCCACAGGCTTTGCTGTACAGTTCTAAGAAGCCAGCAGTGGGA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TCCACATTTGTTAAGGTGGATGCGGCTGAAATGGGAATTATCCCTCCATAGGCTTTGCTGTAAATGACCAGGTC 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 CTTTAGAATGTACAACCTCTCAGTGCTGCTGCAAGCTGGGAGCTGGATTTCTTTCTGTCTTCCTTTTAAAATCC 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 GTTCCTTGTGTTTTCCTAAATAGCCCTTTAAAGAGAAATGCAACCCCAGGGCTGCTGAATGCCAGGGAAGACTC 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 CCCCACCCCGCAGCTTTGAACTCAGCAAACCAAAAAAAAAAAAAGAAGAATAATGCTTATTTTGGGAGAACGTG 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 TTTCTCCTCATTACTCGTGCCCTCCCCCTAGCTGATGTTTGCAGGGGACCCTCGCTTAGCTGGGGACTGCAGAG 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 AGCAGTGGGTAATATTCCCACAAAGCTACGAACTTAGAGAAGGCAAATTCATTAGAATAATATGAAATACAGTC 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 ACTGCTTCTATTTAATCACTTTCTTAGCCACAGACTAGGGTCTTTCCAGCTCCCCCCATTTTCTGGGGAGGGGC 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 GTCCATTACTACACAGCTGTATCCAATCACAGTTCTCTGCTTCTTTAAGGCTGTACCTTCAAGATCGTAGTGGG 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 GGCATGCTGACCACCTGTAGACACAGGAGAAGATGAAAGGTGAGAGGATCCCTTTTTCAGCCCCGACTTGCCTA 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 CTGGCTTTTGATGTTTCCCCTGGAGGATACAAACTCCAAACGCTGGGGTTGGCATTTTGGGTGATTTTGATTTC 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 AATGAAGCCACTTTGCTGAGAGAACTGGGGCACCCACGACCTCCTGATAGAGCTTCTCAGCCAAGTCCCTTGTA 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 GATATTCTCCTGTTTTATTAGAGACCACGTATTTATCGAATCCTGACCTTTCCTTGCACATCATTCATTGGAGT 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 GCACTTCTCGACTGCCCCGATTTTTGACACGGGGTTGTTTTTAATGCTTGTTTTTATATGAGATTTGACTTCTT 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 GATGGACATTTGTATTAGGAAATTGAAGCATGATATATATGTATATATTGTCTCCACCATCTCTCCTGTTGTAT 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 TACTTGGATTGCATGAGATAGTGGGGTGGTTCTTGTTTTTTAAAAAATATTTCCACAGTGTGCAAAGTGCTGGC 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 AACATCCCTCCCTCTCCTCCACCGCTCCCCCACTTTTCTCTGGCTGCCAAGGAGTCATTGATTTTGATTAGCTT 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 CACTGCAGAGCGTCTGTGAAGAGAGAGAGAGAGAAAGGGAGGGAGGCTTTGAAATAAATTTTAAAAAAGACCTC 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 ATATCGGGTTTCAGCAGACAGCAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAC 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 CGTACAAGCAGAGGGAGGCCTCTGAGATCATCGTTTAGGTAGCTTGCTGCATAATGAGATGAAGAGACTTTTGC 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 CTCTTCATTTCTGATGGTGCTGCTTGCTCTCAGAGAGTGGGGAGCCAGGAACCGCTGGGACTGGAGCCCCCGGG 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 ACTTCAACACTCCGAATGAGATCCAGTCCTTTCTGGAAGCTTCTCACCCCCACCTGATCTCCCACAAACAAATA 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 CAATCTCTTCAAATTTGGGGGTCCGTTTCCTATTCTCTTTGTTATTGGTGTAGCTTGAGTAGGAAGTTTCTCTG 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 GGGAGCCCATTGGCCCCAATGGCTGCTGTCCATGGTCCTAGGCCGTGCGCATGTCCTAGACCCCAGTTCCTGTT 4070
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4071 TTGTTTTTTTTTGGGTTTTTTTTGGCCCTGCGCATCTCTTAGAGCCCAGTTCCTGTTTTTTTGTTCGTTTTTTT 4144
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4145 TTTTTTTTTTTAGCCGCCTTCATTTGGATACTGGGGACTTCTTTTCCACTTCTTCTTCTTCTTCTATTTTATTT 4218
Query 1 ----ATGGAGTCTTGCTCTGTCACCCAGGCTGGAGTGCAATGGCGCGATCTCCACTCACTGCAACCTCTGCGTA 70
|..||||||..||||||||||||||||||||||||.|||.||||.|||..||||||||||||||..|.|.
Sbjct 4219 TGAGACAGAGTCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGTGCGAGCTCAGCTCACTGCAACCTCCACCTC 4292
Query 71 CCAGGTTCAAGCGATTCTCCTGTCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCCCACCACCACAGCT-GGC 143
||||||||||||||||||||||.||||||||||||||||||||||||||||||..||||||||||| ||| |||
Sbjct 4293 CCAGGTTCAAGCGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACCCACCACCAC-GCTCGGC 4365
Query 144 TAATTTTTGTATTTTTAGTAGAGACTGGGTTTTACCATATTGGCCAGACTGGTCTCGAACTCCTGACCTCAGGT 217
|||||||||||||||||||.||||..||||||||||||.|||||||||.||||.|.|||||||||.|||||.||
Sbjct 4366 TAATTTTTGTATTTTTAGTGGAGATGGGGTTTTACCATGTTGGCCAGAGTGGTTTTGAACTCCTGGCCTCAAGT 4439
Query 218 GGTCCGCCTGCCTTGGCTTCCCAAAGTGCTGGGATTATAGGAGTGAGCCA-----CTGCGCCTGGCCATT---- 282
|.|||.|||||||||||.|||||||||||||||||||.|||..||||||| ||..|||| |||.|
Sbjct 4440 GATCCACCTGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGAGCTCAGCCT--CCACTTCTT 4511
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4512 ATTTTGATTCTTTTCTGTTTTGATGGTGAGAGGAAAGGGTGATTTACCCAATACTGTCACAGAAAAATGAAACT 4585
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4586 GTGACTGGTTTTCACAATGTATGTAGCTGATCTCATGTTCTCCTATTATTATGTTTCTGACAGTGATAAAATAT 4659
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4660 CACTCTCCCTCCCTGGGGCATTAGAGGAGTCCTCACCCACCCACCTCCTACACAAGTATCTTTTAGGGACAGTG 4733
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4734 GCTCACCATTGTGGACTTTTTGAGTGTCCACCTGATATTACAAGTTGCATTGACCAGAACACAGATTTTGCTCT 4807
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4808 TCTGTGTCAATACCCATTTCTTTTCTGAAGGTCAGAAGTTGGTTAAGGGTTTGGGGGACCAGCTAGACACTCTT 4881
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4882 CTTAGTCCCATGGAGCTGACTGGAAGTTCCATGAGGGGAGGAAATTGATGTCAAAGTGTCATTTTAAAGCTTAA 4955
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4956 GCTGAAAGTTTATTTTTTAAATTCTCATTCATTCATTTAGCATATATTGATTGAGCATCTACAATGTGCCAGTT 5029
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5030 GTAGAATTCCATCTCAGAAGAGACTTGACTTGTGGATGGTGGAGGGGCAGTCCTGCTCGGAAGCAGATGATGTG 5103
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5104 AAATGTTCCTTTCCAGTCTGGTTCACGATGTTTAACAGATTTGTCAGGTCACCACTGTGACCCCAAGCTTTGCT 5177
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5178 GGCAGATTGTTATATAGTATTTACTGAGAGCCCTGCTATCTGGTAAAGGCAGTTAAAAAGCCTGCAATCTCGAC 5251
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5252 TCATTTCCAGCATGAACAGACTGGTCCTTGCTGCTTTACACAATAATCAAAGCTACCTTTTATGGCGTGCTCGC 5325
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5326 CACTCCCAAGCACTGGGCGAAGTGCTTTACCCGTCTTCCCCTCCGCGATGCCTCATGCCCACTTTAGCAGATAG 5399
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5400 TACTGTTAGCATTCCCATTTTACAGTGGAGGAAGCTGAGGCTCAGAGAGGTTAAGCAACTTAGCTGAAGGCCAC 5473
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5474 ACCACCAGCGAAGTGCCTGAGCCAAGATTTGGACTCGAGTCCATGGGACCCCCACGCTCGTGAGCTGACTGCTC 5547
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5548 TGCTCCACTGGGTCCCTTCATGAGGTCGTCCCACAGCACTGCTAGTTCCAGGGCGAGTGCCAGCACATGGCCCC 5621
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5622 ACTGGGAGCCGGGGCCTGACTTAGGTCTACTGGAAAAAGTGTCACCTTTGGGGACACTCAAGGACAGGCTGGTT 5695
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5696 GGTTTCGTTGTGGATTTTATATACTCATGCCCTAACCCTGTGTTCCTGGTTTCTATAAGGCCCCGGGGAAGGTG 5769
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5770 CAAGGAATTTGCAAATAGGGCCTGTATGACTTATTTCCTAGGACACGGGAAGCTTTTCTTACCTCCTTTCTACC 5843
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5844 CTCTTCTCCAACCTGAACTCCCAAGTTTCTTCTCCTGAAGGTCTTTGCACTATAAGCGCCAAGGAGCCCGTGTG 5917
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5918 CGTGGCAGGGGCGGCTGGGAGGGTATCTGGAGAACCTTAGTGAGGCCTCTGGCCTAGCCAGAGAGGCAATAAGC 5991
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5992 TTGGGGACGTTCCGTTCTGGGTTCTGACGTTGTTGGTTCTGACGTCGTTGTGCTCTTTTGTAAGAGGAATTTCA 6065
Query 283 ---------------------------------------------------------------- 282
Sbjct 6066 TACCTTGGAGACGCTTTGTACATATTTGTAATGACTTTATTAAAAAACTGATTGTGCACTTCTA 6129
