Nucleotide Global Alignment

Description

Query:
TRCN0000469746
Subject:
NR_102347.2
Aligned Length:
4084
Identities:
239
Gaps:
3809

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATCCGAGCGGGTTTGACGGAAGGAGCGGCGGCGACGGAGGAGGAGGATGGAGGCGGTGGTGTTCGTCTTCTCTC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TCCTCGATTGTTGCGCGCTCATCTTCCTCTCGGTCTACTTCGTATCCTTGCCTGAGGCAGGCGAACGCCTTGCC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GGGGGACACGGCTGAGGTGGGTAATTCCAGAATTGATTGGCCATACCATTGTCACTGTATTACTGCTCATGTCA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TTGCACTGGTTCATCTTCCTTCTCAACTTACCTGTTGCCACTTGGAATATATATCGATACATTATGGTGCCGAG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TGGTAACATGGGAGTGTTTGATCCAACAGAAATACACAATCGAGGGCAGCTGAAGTCACACATGAAAGAAGCCA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TGATCAAGCTTGGTTTCCACTTGCTCTGCTTCTTCATGTATCTTTATAGTATGATCTTAGCTTTGATAAATGAC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TGAAGCTGGAGAAGCCGTGGTTGAAGTCAGCCTACACTACAGTGCACAGTTGAGGAGCCAGAGACTTCTTAAAT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CATCCTTAGAACCGTGACCATAGCAGTATATATTTTCCTCTTGGAACAAAAAACTATTTTTGCTGTATTTTTAC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  CATATAAAGTATTTAAAAAACATGAATTGAGTTTCTGTAGATTTCTAGTTCTCAACTTTAGCCTGAACGCCAAC  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  ACTTGAAGGTGTTTTTCATCCTCTGTATGTTGAAGGTGGTTATTTGTATGTAGGAACAGGACTGCCATCCCAGC  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  TTTGCATGCCAAAGAAATAAAGAACACACTTTAAAGGGCAAACTGAAGAGATGAGCGAGCAAAGGTGCCCTTCA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  GGTCTACTGAAAAGTTAGAGTACAAAACAACACTGTTGATCTGGACAAAAGAAGAAAAATTACCCTTTTTGCTT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  GTGTTGTGACAACTTCATTTAATATGGTTTAAAGATTTATGAGACTGTCAGCTAAAAGTCTTTTCACAAGAATG  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  TCAACAGAGAATGGCATCTCAAAATATATATATTTCTTTGCACAATTTGTGAAACCTTATAAGCCATTTTCCCC  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  AGGTACAATGTAGTTCCTGCTGATAGAAAGGAAATATTTTGTCAAGAGCTTTCATTTAAAAGCTACTACCTCCA  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  CAATCACCCCCAAACCCAGAAAATCCCCACTGGCTCTTGCCAGTCTGGTTTTCGTATTGCAGTTATTCCAATTG  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  TATTTGATCTCCCTGATAACGTATTTTCATGGGTTTGGGTAGAAGATGCTAATCAGATTAGAAGCAGGAATAGT  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  TATTTGCTGTCTGTGAAATTGAGCCTTTTGGTGCGCCACGTGGTGCCAGATCAACACTTCTATCCCTCTGCACT  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  GACCACGTTGTGAACTGGGAGACCAAATGCAAGCCATTTCATGGACATAGCAATATACAACCAAACTCTGTTCC  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  TTGGAGTTATATTGTAAACTCTTGCAGGTGGGAGAGCAGTTCACCTCCTTAGCTCTGTTTGCCAGCTCTTACAG  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  GGTAAAATAAACCTGGCAATTTATCCTCAGTCCTAGTTTGTGGTTTAATGTTGCTATCTTAAGCACTGGCATTT  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  GGGCAAAACATGACTGTGTTCTGTGGGAGAATCCAAAGGCATTATTCACTCTAGTTGAGATAGAATTGGGTGGC  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  TAAACAGGGTGTGTGGTACCCAAAAGATTAAATGTTACATGTCCTTTTAGTCCTTGACCAGGTCTAGCCTTGGC  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  AGAAGCAAGGGAGCCACTAAGCCAAACTCCCTGTGCAGACAGACCATGTTTCAAGGCTGGAAGTAGTGCCCTGG  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  CAACACACAAAAGGAACGGTGAAATGGTAGGCAAAGTGAACTTGGCTCTGCTGGCCTCTTTGGGGTCACAGAAA  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  TTGCTCCTTGTGGTAATCTTATATTTCTGTCAGGCACAGGGCCAAGAAGCTGTGTAACAGACATTACTTTGCTT  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  GCATCTCTTTTTCATACCTTTTCCCTCTGAGGCAGCTTTTGCTTAGAAAACAGTCCCTTCACTCTGCCTTTCCT  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  CCTAACTTCCTGTGCCTCTTCATGTTCTGCTCAAGCTTTTTAAAGCAACGAAGCTGTTGGAGAACTTAAATCCT  2072

Query    1  -----------------------------------------------------------ATGGAGTCTTGCTCT  15
                                                                       ||||.||||||||.|
Sbjct 2073  TGCAACTGAGAGATAAGCTACTTAAAGGCGGTAGAGATCTTTTTTTTTTTTTTTTTGAGATGGGGTCTTGCTGT  2146

Query   16  GTCACCCAGGCTGGAGTGCAATGGCGCGATCTCCACTCACTGCAACCTCTGCGTACCAGGTTCAAGCGATTCTC  89
            ||..||||||||||||||||.|||.|.||||||..|||||||||||||||||.|.|..||||||||||||||||
Sbjct 2147  GTTGCCCAGGCTGGAGTGCAGTGGTGTGATCTCAGCTCACTGCAACCTCTGCTTTCTGGGTTCAAGCGATTCTC  2220

Query   90  CTGTCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCCCACCA-CCACAGCTGGCTAATTTTTGTATTTTTAGT  162
            |||.||||||||||..|||||||||||||||.|       |.| |.||..||||||||||||||||||||||||
Sbjct 2221  CTGCCTCAGCCTCCCAAGTAGCTGGGATTACGG-------CTAGCTACTCCTGGCTAATTTTTGTATTTTTAGT  2287

Query  163  AGAGACTGGGTTTTACCATATTGGCCAGACTGGTCTCGAACTCCTGACCTCAGGTGGTCCGCCTGCCTTGGCTT  236
            |||||..||||||.|||||.||||||||.||||||||.||||||||||||||...|.||.|||||||||||..|
Sbjct 2288  AGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAAACGATCTGCCTGCCTTGGTCT  2361

Query  237  CCCAAAGTGCTGGGATTATAGGAGTGAGCCACTGCGCCTGGCCATT----------------------------  282
            ||||||||||||||||||||||.||||||||||||||||||||||.                            
Sbjct 2362  CCCAAAGTGCTGGGATTATAGGTGTGAGCCACTGCGCCTGGCCATGTAGATGACTTTTGACCAAAATGTTTCAC  2435

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 2436  CTTCTCATTCAGATATTCTTAGTAACCAAAACAGTGACTCATGCAGTTGAGAGAGCCTTTGGGCTGTCAGTTTA  2509

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 2510  CAGTACATCAGGCTTGCTGAGGCTAAGCAAATCAGAAAGGTGCCATGTTTATAACAGAGGTCAAAGCTCCTTAC  2583

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 2584  TTCTGAAACATTAGCTGTGGTTAAAAACAAAAACTCTTCCTTCTTGTATTGCTTGTCTATCAAAGCCAGGAAAG  2657

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 2658  TGGGGGATCACTGTAGTTAAATTTTTTTTTTTTTTAATTAGAGACAGAGTCTTGCCCTGTCGCCCAAGCTGGAG  2731

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 2732  TGCACTGGCGCAATCGTGGTACACTGCAGCCTTGAACTCCTGGACTCAAGCAGTCCTCCTGCCTCAGCTTCCCA  2805

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 2806  AGTAGTTGGGAGTAGGTGCACACCACCATGCCCAGCGAATTTTTTGTAGAGACAGAGGTCTTGCTATGTTGCCT  2879

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 2880  AGGCTGGTATCAAAATTACTGGCCTCAAGCGATTCTCCTGCCTCGGCCTCCCAGATGTTGGGATTACTGGTGTG  2953

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 2954  AGCCACCACGCCCAGCTCAAAAACAATTTTTTTAGGGGCACTTCTACAAATCATGAAAGGGGGATAAAAGCACT  3027

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 3028  GACTTTAAAAAGCCATGTTTAAGATGCTATAAATGTTCTCCCCTTTTCATTGATTGGAGAGTTGTAGAGGACCT  3101

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 3102  TAGAGATCATTTTGTCTAACTCCCTCATCCCAAAGATAAACTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACT  3175

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 3176  GGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTA  3249

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 3250  GAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTG  3323

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 3324  GGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAG  3397

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 3398  AGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGG  3471

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 3472  GAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCTTAGT  3545

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 3546  CCAGTGTTCTCTCTCCCTTACCACTCCTCTTCCCCTTCCCTCTATAATGGCAGTACCCAGGGCCCGGTCCATAG  3619

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 3620  ACTACTATCGAGTGCTCCTATGTGCATCTTAGTACGTATCATTTTCCCTTGCCTTTTTCCTTCTATCCTTTCAG  3693

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 3694  TGGTAGCAACTGCCCTTGCTAATCACCGTAACCTCGGCTGAGAAAGAAGAGGAAGCGAAATCCAAGATGCAGCT  3767

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 3768  CAGTTCATCAAAGCCTAGCAGGTCCCCTCAGCTGCCTTTTCATGCCTGCCACAGACTACAGTAGGACAAAACCT  3841

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 3842  GACCTGGTCTTTGAAGTTAAGAGCTAAGAAAGCTTCCTATAGTAGTATCTCCCATGGCACTTACCACATTCTAT  3915

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 3916  CTGGTATTACAGTTATTTGTATGCAATTAATCACTCTTAGATTGTATGTTCCTGGAGGGCAGAATATGCCCATT  3989

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 3990  CATATTTGTATCTTCTTCCTTCTGCTCTTGGCACCTAACACAGTGCCTTGCACACAAACAATAAATGATTGTTG  4063

Query  283  --------------  282
                          
Sbjct 4064  AGTGAATAAGTAAA  4077

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