Nucleotide Global Alignment
Description
- Query:
- TRCN0000469746
- Subject:
- NR_102347.2
- Aligned Length:
- 4084
- Identities:
- 239
- Gaps:
- 3809
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATCCGAGCGGGTTTGACGGAAGGAGCGGCGGCGACGGAGGAGGAGGATGGAGGCGGTGGTGTTCGTCTTCTCTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCCTCGATTGTTGCGCGCTCATCTTCCTCTCGGTCTACTTCGTATCCTTGCCTGAGGCAGGCGAACGCCTTGCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGGGGACACGGCTGAGGTGGGTAATTCCAGAATTGATTGGCCATACCATTGTCACTGTATTACTGCTCATGTCA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TTGCACTGGTTCATCTTCCTTCTCAACTTACCTGTTGCCACTTGGAATATATATCGATACATTATGGTGCCGAG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGGTAACATGGGAGTGTTTGATCCAACAGAAATACACAATCGAGGGCAGCTGAAGTCACACATGAAAGAAGCCA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGATCAAGCTTGGTTTCCACTTGCTCTGCTTCTTCATGTATCTTTATAGTATGATCTTAGCTTTGATAAATGAC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TGAAGCTGGAGAAGCCGTGGTTGAAGTCAGCCTACACTACAGTGCACAGTTGAGGAGCCAGAGACTTCTTAAAT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CATCCTTAGAACCGTGACCATAGCAGTATATATTTTCCTCTTGGAACAAAAAACTATTTTTGCTGTATTTTTAC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CATATAAAGTATTTAAAAAACATGAATTGAGTTTCTGTAGATTTCTAGTTCTCAACTTTAGCCTGAACGCCAAC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ACTTGAAGGTGTTTTTCATCCTCTGTATGTTGAAGGTGGTTATTTGTATGTAGGAACAGGACTGCCATCCCAGC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TTTGCATGCCAAAGAAATAAAGAACACACTTTAAAGGGCAAACTGAAGAGATGAGCGAGCAAAGGTGCCCTTCA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GGTCTACTGAAAAGTTAGAGTACAAAACAACACTGTTGATCTGGACAAAAGAAGAAAAATTACCCTTTTTGCTT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GTGTTGTGACAACTTCATTTAATATGGTTTAAAGATTTATGAGACTGTCAGCTAAAAGTCTTTTCACAAGAATG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TCAACAGAGAATGGCATCTCAAAATATATATATTTCTTTGCACAATTTGTGAAACCTTATAAGCCATTTTCCCC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AGGTACAATGTAGTTCCTGCTGATAGAAAGGAAATATTTTGTCAAGAGCTTTCATTTAAAAGCTACTACCTCCA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CAATCACCCCCAAACCCAGAAAATCCCCACTGGCTCTTGCCAGTCTGGTTTTCGTATTGCAGTTATTCCAATTG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TATTTGATCTCCCTGATAACGTATTTTCATGGGTTTGGGTAGAAGATGCTAATCAGATTAGAAGCAGGAATAGT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TATTTGCTGTCTGTGAAATTGAGCCTTTTGGTGCGCCACGTGGTGCCAGATCAACACTTCTATCCCTCTGCACT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GACCACGTTGTGAACTGGGAGACCAAATGCAAGCCATTTCATGGACATAGCAATATACAACCAAACTCTGTTCC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TTGGAGTTATATTGTAAACTCTTGCAGGTGGGAGAGCAGTTCACCTCCTTAGCTCTGTTTGCCAGCTCTTACAG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GGTAAAATAAACCTGGCAATTTATCCTCAGTCCTAGTTTGTGGTTTAATGTTGCTATCTTAAGCACTGGCATTT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GGGCAAAACATGACTGTGTTCTGTGGGAGAATCCAAAGGCATTATTCACTCTAGTTGAGATAGAATTGGGTGGC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TAAACAGGGTGTGTGGTACCCAAAAGATTAAATGTTACATGTCCTTTTAGTCCTTGACCAGGTCTAGCCTTGGC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AGAAGCAAGGGAGCCACTAAGCCAAACTCCCTGTGCAGACAGACCATGTTTCAAGGCTGGAAGTAGTGCCCTGG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CAACACACAAAAGGAACGGTGAAATGGTAGGCAAAGTGAACTTGGCTCTGCTGGCCTCTTTGGGGTCACAGAAA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TTGCTCCTTGTGGTAATCTTATATTTCTGTCAGGCACAGGGCCAAGAAGCTGTGTAACAGACATTACTTTGCTT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GCATCTCTTTTTCATACCTTTTCCCTCTGAGGCAGCTTTTGCTTAGAAAACAGTCCCTTCACTCTGCCTTTCCT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CCTAACTTCCTGTGCCTCTTCATGTTCTGCTCAAGCTTTTTAAAGCAACGAAGCTGTTGGAGAACTTAAATCCT 2072
Query 1 -----------------------------------------------------------ATGGAGTCTTGCTCT 15
||||.||||||||.|
Sbjct 2073 TGCAACTGAGAGATAAGCTACTTAAAGGCGGTAGAGATCTTTTTTTTTTTTTTTTTGAGATGGGGTCTTGCTGT 2146
Query 16 GTCACCCAGGCTGGAGTGCAATGGCGCGATCTCCACTCACTGCAACCTCTGCGTACCAGGTTCAAGCGATTCTC 89
||..||||||||||||||||.|||.|.||||||..|||||||||||||||||.|.|..||||||||||||||||
Sbjct 2147 GTTGCCCAGGCTGGAGTGCAGTGGTGTGATCTCAGCTCACTGCAACCTCTGCTTTCTGGGTTCAAGCGATTCTC 2220
Query 90 CTGTCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCCCACCA-CCACAGCTGGCTAATTTTTGTATTTTTAGT 162
|||.||||||||||..|||||||||||||||.| |.| |.||..||||||||||||||||||||||||
Sbjct 2221 CTGCCTCAGCCTCCCAAGTAGCTGGGATTACGG-------CTAGCTACTCCTGGCTAATTTTTGTATTTTTAGT 2287
Query 163 AGAGACTGGGTTTTACCATATTGGCCAGACTGGTCTCGAACTCCTGACCTCAGGTGGTCCGCCTGCCTTGGCTT 236
|||||..||||||.|||||.||||||||.||||||||.||||||||||||||...|.||.|||||||||||..|
Sbjct 2288 AGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAAACGATCTGCCTGCCTTGGTCT 2361
Query 237 CCCAAAGTGCTGGGATTATAGGAGTGAGCCACTGCGCCTGGCCATT---------------------------- 282
||||||||||||||||||||||.||||||||||||||||||||||.
Sbjct 2362 CCCAAAGTGCTGGGATTATAGGTGTGAGCCACTGCGCCTGGCCATGTAGATGACTTTTGACCAAAATGTTTCAC 2435
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2436 CTTCTCATTCAGATATTCTTAGTAACCAAAACAGTGACTCATGCAGTTGAGAGAGCCTTTGGGCTGTCAGTTTA 2509
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2510 CAGTACATCAGGCTTGCTGAGGCTAAGCAAATCAGAAAGGTGCCATGTTTATAACAGAGGTCAAAGCTCCTTAC 2583
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2584 TTCTGAAACATTAGCTGTGGTTAAAAACAAAAACTCTTCCTTCTTGTATTGCTTGTCTATCAAAGCCAGGAAAG 2657
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2658 TGGGGGATCACTGTAGTTAAATTTTTTTTTTTTTTAATTAGAGACAGAGTCTTGCCCTGTCGCCCAAGCTGGAG 2731
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2732 TGCACTGGCGCAATCGTGGTACACTGCAGCCTTGAACTCCTGGACTCAAGCAGTCCTCCTGCCTCAGCTTCCCA 2805
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2806 AGTAGTTGGGAGTAGGTGCACACCACCATGCCCAGCGAATTTTTTGTAGAGACAGAGGTCTTGCTATGTTGCCT 2879
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2880 AGGCTGGTATCAAAATTACTGGCCTCAAGCGATTCTCCTGCCTCGGCCTCCCAGATGTTGGGATTACTGGTGTG 2953
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2954 AGCCACCACGCCCAGCTCAAAAACAATTTTTTTAGGGGCACTTCTACAAATCATGAAAGGGGGATAAAAGCACT 3027
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3028 GACTTTAAAAAGCCATGTTTAAGATGCTATAAATGTTCTCCCCTTTTCATTGATTGGAGAGTTGTAGAGGACCT 3101
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3102 TAGAGATCATTTTGTCTAACTCCCTCATCCCAAAGATAAACTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACT 3175
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3176 GGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTA 3249
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3250 GAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTG 3323
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3324 GGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAG 3397
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3398 AGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGG 3471
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3472 GAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCTTAGT 3545
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3546 CCAGTGTTCTCTCTCCCTTACCACTCCTCTTCCCCTTCCCTCTATAATGGCAGTACCCAGGGCCCGGTCCATAG 3619
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3620 ACTACTATCGAGTGCTCCTATGTGCATCTTAGTACGTATCATTTTCCCTTGCCTTTTTCCTTCTATCCTTTCAG 3693
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3694 TGGTAGCAACTGCCCTTGCTAATCACCGTAACCTCGGCTGAGAAAGAAGAGGAAGCGAAATCCAAGATGCAGCT 3767
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3768 CAGTTCATCAAAGCCTAGCAGGTCCCCTCAGCTGCCTTTTCATGCCTGCCACAGACTACAGTAGGACAAAACCT 3841
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3842 GACCTGGTCTTTGAAGTTAAGAGCTAAGAAAGCTTCCTATAGTAGTATCTCCCATGGCACTTACCACATTCTAT 3915
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3916 CTGGTATTACAGTTATTTGTATGCAATTAATCACTCTTAGATTGTATGTTCCTGGAGGGCAGAATATGCCCATT 3989
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3990 CATATTTGTATCTTCTTCCTTCTGCTCTTGGCACCTAACACAGTGCCTTGCACACAAACAATAAATGATTGTTG 4063
Query 283 -------------- 282
Sbjct 4064 AGTGAATAAGTAAA 4077
