Nucleotide Global Alignment
Description
- Query:
- TRCN0000469746
- Subject:
- NR_103517.2
- Aligned Length:
- 6113
- Identities:
- 244
- Gaps:
- 5836
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CCCTCGGGTAACGGTCGCGAGAGGCCGCTTGCATGACCCTGACATCGGCAGCGGGAGCGGCGGCCAGACTCTCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGGAAGTTTAGGATATTTCACAGTTCTGAATGTTAGCCACTGAAAATGCCAGTAGATGATGAAGCCTCTGAAGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGACACGGATTCATTTTTCTCAAACAGCCCAAGAACCTTTATTTTCCAATAAGAGAATATAACAATTTCTGTAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ACTATGGAAGAGTTTGACTTGGTGAAAACCTTACACAAAACTTCATCTTCTGTAGGATCTGATGAAAATTCTCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCATTCTCTTGGACTGAACTTAAATACTGATAGAAGTAGTCCCCACCTTAGTACAAATGGGGTATCCTCTTTCT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CAGGGAAGACCAGACCATCTGTAATTCAAGGTACAGTTGAAGTCCTAACTTCTTTAATGCAAGAGCTACAAAAC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AGTGGAAAGACTGATTCGGAACTTTGGAAAAACTGTGAGAATGTAGAGTAAGCGAAATGAAAGATTACCTGGTT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TAAGAATTCGATAGCAGCAACTGCTAAGTACCAGGTGGTTACAGCTATTCAATTTGGTGGAAAAACAATGCCAA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GAACAGATAGTTGCCCAGCAGGAGCAGTTCCACAACCAAATTCAACATATACAGGAGGAGATAAAAAATTTAGT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CAAATTACAGACTAGTAGTGCTTCCTTAGCTTCCTGTGAAGGAAATTCTTCAAACAAACAAGTATCTTCGGAAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GTCAAATGGGTTTTTTTTCTCTAAGCAGTGAGAGAAATGAATCTGTTATCCATTATCCTGAATCCACAGAACCT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GAAATACAGCAAGAAATGTCCACGTCACAACCAGACTGCAATGTGGATAGTTGCTCAGTAAGCAGTGGATATGG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CACCTTTTGTATCTCAGAATTAAATCTGTACAAATCTAAAGACCCTAAGGAGTTCATGGAGCACATAGATGTTC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CCAAAGGACAGTATGTAGCACCTGCGGTGCCGGCTGAGTCACTTGTAGATGGTGTGAAAAATGAGAATTTTTAT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ATACAGACTCCTGAAGAGTGTCATGTGTCTTTAAAGGAAGATGTATCCATTTCTCCTGGTGAATTTGAACATAA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TTTTCTTGGTGAAAATAAGGTTTCTGAAGTATACAGTGGGAAAACAAATAGTAATGCTATAACATCATGGGCAC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AAAAACTGAAGCAGAACCAACCAAAGAGAGCACATGTAGAAGATGGAGGTTCAAGATCTAAACAAGGAAATGAG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CAAAGTAAGAAGACACCAATTGAGAAATCTGATTTTGCTGCTGCTACACATCCTCGTGCTTTTTACCTCAGTAA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 ACCAGATGAAACTCCAAATGCTTGGATGTCTGATTCAGGAACAGGATTGACTTACTGGAAACTAGAGGAAAAGG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 ATATGCACCACTCTTTGCCTGAAACTTTAGAGAAGACGTTCATATCATTGTCTTCCACAGATGTGTCACCAAAC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CAGTCTAATACTAGTAATGAGATGAAGCTACCGTCACTGAAGGATATTTATTATAAAAAACAAAGGGAAAACAA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GCAGTTACCTGAGAGGAATCTCACTTCTGCTTCCAACCCAAATCATCCACCAGAGGTAAAGTTGTCCACATTCT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GCCGAGTGAACGTGAACAATGCTTCCTGACTCTAACTTTTACCTCAAGCTTCATTTTCCCTAGGAGATCTAAAG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CCTACTCACTTCAAAACAAGCAAAACAAAGCCGAGTTCTGAGGGATTAGGCAGAATCTGAAGGAAAAGCATGCT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CGACACATAGCAGATCTTCGAGCTTATTATGAATCAGAAATAAATAGTTTGAAACAGAAGCTGGAGGCAAAAGA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 AATCTCTGGAGTTGAAGATTGGAAGATAACCAATCAAATTCTTGTAGACAGATGTGGCCAATTAGATAGTGCTT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TGCATGAAGCTACTAGTCGCGTGAGAACACTTGAAAATAAGAATAACTTACTGGAAATTGAAGTGAATGATTTG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 AGAGAACGCTTCAGTGCAGCCAGCAGTGCTTCCAAAATTTTGCAGGAACGAATTGAAGAAATGAGAACAAGCAG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TAAAGAAAAAGACAATACCATCATTCGACTAAAATCTAGACTGCAAGATTTAGAAGAAGCATTTGAGAATGCTT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 ACAAACTCTCAGATGATAAAGAAGCTCAACTAAAACAAGAGAACAAAATGTTTCAAGATCTTTTAGGAGAGTAT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GAGTCCCTTGGAAAAGAACACAGGAGAGTAAAGGATGCATTAAATACAACTGAGAACAAATTGCTTGATGCATA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TACTCAGATTTCTGATTTGAAAAGAATGATTTCAAAACTTGAAGCTCAGGTCAAGCAAGTAGAACATGAAAATA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TGTTAAGCCTTCGTCATAATTCTAGAATTCACGTGAGACCCTCGCGTGCCAACACACTAGCAACTTCAGACGTC 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 AGCAGGCGGAAATGGCTGATTCCAGGTGCAGAGTATTCCATCTTTACTGGCCAGCCTCTGGACACCCAGGACAG 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TAACGTGGATAACCAGCTGGAGGAAACCTGTAGCCTAGGGCACCGTTCACCTCTGGAAAAGGATTCTTCACCTG 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 GAAGTTCATCAACAAGCTTGTTGATAAAAAAGCAAAGAGAGACTTCAGACACGCCGATCATGAGAGCTTTAAAA 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 GAACTTGATGAGGGAAAAATATTTAAAAATTGGGGGACACAGACAGAGAAAGAGGACACCTCAAATATAAATCC 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TCGGCAAACTGAAACTTCAGTTAATGCAAGTCGTTCTCCAGAAAAGTGTGCCCAACAGAGACAAAAGAGACTTA 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 ATTCGGCCTCACAGAGATCATCATCTTTACCACCTTCAAATCGTAAATCAAGTACTCCAACAAAAAGAGAGATT 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 ATGCTAACACCAGTGACTGTGGCTTATAGTCCAAAGCGATCCCCTAAAGAAAACTTGTCCCCAGGATTTAGTCA 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 TCTGCTTAGCAAAAATGAGAGCAGTCCAATTCGATTTGATATACTTTTGGATGATTTAGATACTGTTCCTGTGT 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 CTACATTACAACGTACCAATCCAAGAAAGCAACTCCAGTTTCTTCCTCTAGATGACTCGGAAGAAAAAACTTAT 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 TCTGAGAAAGCCACCGATAACCATGTTAATCATAGCTCTTGCCCTGAACCGGTGCCAAATGGAGTGAAGAAAGT 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 ATCTGTGAGAACAGCCTGGGAGAAGAATAAATCAGTTAGCTACGAACAGTGTAAGCCGGTTTCAGTCACTCCAC 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 AGGGGAATGATTTTGAATATACAGCAAAAATTCGGACCCTAGCTGAAACAGAACGATTTTTTGATGAACTTACA 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 AAAGAAAAGGACCAGATTGAGGCAGCACTAAGCAGGATGCCTTCTCCTGGAGGACGAATCACTTTACAGACAAG 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 ATTAAATCAGGAAGCCTTGGAAGATCGTTTGGAAAGGATTAATCGAGAACTGGGTTCAGTTCGCATGACGCTAA 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 AGAAATTCCATGTTTTGCGCACCTCTGCAAATCTTTGAGATTTGTAGCCATTAAATTTTGAGACATTTTTGTTT 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 GCACTAATGTATAATTATGCAGTCAGAAAAGGCAAACTATTTTGTACTGTTTATAAGCCTTCAAACAGTAGTTT 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 TACAATCATGCTATTCTTACACTTGCTATTTTATACTTCAAATGGCCACATATTTTCAAGATATTTTTGTTATG 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 CTCAGGAATCTCTTGTATATTTTACTATTTAAAAAGCATTATTTTTAAATAGTATCTGTCTCCAATTTATATCA 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 AGAATAAGGAAATATAAACAGAGGAAGCAGCTTGTTTCTAAACAAATAGTGTTATCCTTTTACAATTAACTGCA 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 CATCAATTTTATAGACTTGTTCTACATTGTAAATACAATTCAGTTTTTAAAAAATAAAGCTTAATAGCTTCCAT 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 AATGATAGACTAGTACATGCTGAATACATAAACAATTACAGTGTACCTTGGATTTCAGTTGTGTTGAGGTTTTT 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 AAAAAATGATAATGCAATTCGTATTTGAAACGTGTCTTAGAGTGAATATCAGAATAGTAATAATGGACTCTTGG 4070
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4071 AAAGCTTTGAAAACTACATGAATATAACTCATTTTCTTTAAACTTTATTGTCTGTAAGAGAAAAAAGAGAGATT 4144
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4145 GTAATTCTCTAATTTTATCTTTTCTAAAAAAGTTAAACAATTGGAGAGCCCTCTCTGGAGGGCTCTCAGAGTAG 4218
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4219 CTCTCTGCCCATTGTTCTGAATTAACTTGTGTCCCACCCTGGACAATAAATGGACAGATAAACCCTTTGAAATA 4292
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4293 CAAGCCACCACCCCGTGAGGGATTAAGAGGGCAGCCTGGTTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCAT 4366
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4367 AGTTGTCATCTGGATATGTTCACCCCTTTCCACTCCTTCACCCTGGCCAAAAGGAAAATATTTCCACTGTAGGT 4440
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4441 GCTGTAAGAACACTAGACTTTAGATCATCACAATCTACTGTATTTGTTAATGGACAGGGAGTGTGTCCGGATGG 4514
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4515 AGCCTGGTGCCTTCCCCTCGGCCTTGCAGAGGGCTCCAGCCCACTGCCTCTGTGGTAGCCGCTGGCTCTCAGAA 4588
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4589 GTAGCACGTGGGCAGGAGTCTCTCCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTT 4662
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4663 GGAGCTGTGTAACTACTTAGTTTTTGGTAGCCAATCAGAACGCAGTGCCCCACATATTCCAGCTCGGTACATGT 4736
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4737 TGATAAACAGACTCATCCAAACTTTCAAAATGGATTCGTACTAAACATGCTCAGGTTTTAAATTTTGGTTTGCT 4810
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4811 TTTGAGCTTTTCCTCTTTATGTGGCTCTTAATAATAAGTAGTTAGAATGAACCAAGCCATCCCAGTTATTCCAA 4884
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4885 GCAGGCTCTCAAATGACCTTTGAGCACCCTTCACCTGGCTGGTCCCCAGGCCAGGGGTCCACAGCCCTGCTCCC 4958
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4959 TTCTCAGCAAGGAGGGTGGCCTGTCTGACAGTGCAGTTGAACCTTTGCTCCCTACTCTGCAACTTTTGAAGACT 5032
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5033 TCAGGCTAATCAAAATTACTTATAATTAGAATCAAGTGCCTTTATTCTTGTTTTTTATTTTTATTTTATTTTAT 5106
Query 1 ----------------ATGGAGTCTTGCTC-TGTCACCCAGGCTGGAGTGCAATGGCGCGATCTCCACTCACTG 57
|||||||.||||.| |||..|||||||||||||||||||||..||||||..|||||||
Sbjct 5107 TTATTTATTTTTTTAGATGGAGTTTTGCCCTTGTTGCCCAGGCTGGAGTGCAATGGCATGATCTCAGCTCACTG 5180
Query 58 CAACCTCTGCGTACCAGGTTCAAGCGATTCTCCTGTCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCCCA-- 129
||||||||||.|.||.|||||||||||||||||||.||||||||.|||.||||||||||||||||| ||
Sbjct 5181 CAACCTCTGCCTCCCGGGTTCAAGCGATTCTCCTGCCTCAGCCTGCTGGGTAGCTGGGATTACAGG----CATC 5250
Query 130 --CCACCACAGCTGGCTAATTTT-------TGTA---------------------------------------- 154
|||||||..|.|||||||||| ||||
Sbjct 5251 TGCCACCACGCCCGGCTAATTTTGTGTGTGTGTATATGTCTATGTGTGTGTGTGTATGTATATATCTTTTTTTT 5324
Query 155 -TTTTTAGTAGAGACTGG-GTTTTACCATATTGGCCAGACTGGTCTCGAACTCCTGACCTCAGGTGGTCCGCCT 226
||||||||||||| ||| ||||.||||||||||||||.||||||||.|||||||||.||||.|||.|||||||
Sbjct 5325 TTTTTTAGTAGAGA-TGGTGTTTCACCATATTGGCCAGGCTGGTCTCAAACTCCTGAACTCATGTGATCCGCCT 5397
Query 227 GCCTTGGCTTCCCAAAGTGCTGGGATTATAGGAGTGAGCCACTGCGCCTGGCC-ATT----------------- 282
||||||||..|.||||||||||||||||.|||..||||||||..|.||.|||| |||
Sbjct 5398 GCCTTGGCCCCTCAAAGTGCTGGGATTACAGGCATGAGCCACCACACCCGGCCTATTCTTGGTATTCTTTATTC 5471
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5472 TTGGTTTTCTAGCCTTTAGAAAAAAAAAATCTAGTCTTGGTAAAGAAAATGTTCATTTTAATCAAGCTCCAGTA 5545
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5546 CAGCTTGTGTCAAGACCTAGTAAGACCACCTTTAATGTGTTCCTGGATATGACATTAAAAACTAACTTGAAAAT 5619
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5620 TGTTAGGATATTTCCTTGTTCCCTACTTTTATTGTAAAATCTACTACATTCTTAAGAATTAAAAAATGCCATTT 5693
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5694 CAGAAGAGATGATAGTTTTATCTTGCCAAGGAATTATCTTCTTAGTAGCCTATATTGGCTTATTCCAAAAAAGG 5767
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5768 CGTTAACCTCCATCAAAACATCTTCTGCGCCTCTCTCTCAGCATATGCTTTGATATTTGAAGTGTGTAATAGAT 5841
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5842 TGGAGCTATCAGTCACTTATTTCTAAAAAATGTATTCTTTTTTCTTCATAGCTGTGAAGAGGGATACCAAGGAA 5915
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5916 AGTTCTTTCTGCTGTCTTTCTCTTCGGTAATGCTTATCTTATGAACACTCAACTGAAAAAACACTCCACCTAAA 5989
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5990 AGCAGGAAAGATGGCAATTCTAAATAGCAGCTATTATCCCCGGGTATAAACTATTTTTGTTGTTGGCTTGGGGC 6063
Query 283 --------------------------------------------- 282
Sbjct 6064 TTTGCTGCAGGTATTAATAGTTTAAAAAGAAAAAAAAAAAAAAAA 6108
