Nucleotide Global Alignment
Description
- Query:
- TRCN0000469746
- Subject:
- NR_103831.1
- Aligned Length:
- 2856
- Identities:
- 240
- Gaps:
- 2580
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGTGCAAACCAGTCCGGCTGCTTTAGAAACAAGTTGTTTTCTGCTTCCAGAACCACCCAGGAGCCTGCGTGATG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCTCTTCCCCCACCCGACCCCCTCTTCCCTCTGCCGGTCTCCTTGCTCCAGGATCTGCACAAGCAGAGGCGGCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CAGGGTTTGGCTTCCAGTTGGGAAATGAAGCTCCAAGGGCAGCCCTACTATGGCGGGCTGTGTGACCTGGGCCA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGCCCCTTGACATCTCCAGACTCGGCTTCCACATCTGCCACCACCAGGACACTGGATTGAATGTTGGGTACGTT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GTAAGGCAAGGGAGACACAGAAGTCCTAAAGGCAATAAAGCTTTTCCCCACTGCCCCTCCATCTGGACGAGTCT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CCTGCCAAGCATCTTCAAGTCCCACTTTGAAACACGATTCTGCCACCTTCCTGTTCTGAGGATCTGGGAAAGCA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AGGGGGAAGGGGCTATTGGGAGTCCCGCTTGCTCCAGGCCCAGACCAGGAGGCTCAGGCAGGCTTATCTACTTC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGATGTGGTGGGGGGCCCAGGATGCTGCCAGGGTCTCACAGCCATGGTCTCACAGCCACTATCAGCCTGTCCTC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AAGGGTATAAGAGAAGCTGGAAGCCTAGATGGGCACTGCCCTCAGGCAACTTCCAATCCAGCCAAGAAGAATAA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AGAGTAACACACAAAATATTGGGGGCATGAGGCAATAACTGTGGGTACACCTATAAAAACCTCTAATTGGGCTT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ACCTGGTACCAGACAGTATTTTAATTGGATCATATATAGTGCATTAATTCAGTTAATATTCACAACACCCCTAT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GAGGTAGCTACAATTATTATCCCCATTCGATGATGGGGAAAACTGACATCAGAAGAGGTCAACTTGCCCAAGTT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TCCAGAGCTGAAAAGCAACAGAGCTGAGATTTCACTGCAGGTATTCTGGCCCCAGAGTCTTGGTACAAATAGTG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TTAATGAACAAGTCTTCTTCTGGTAAGAGCACCCCAATTTTCCTTTGGAGAACCTCCACTTCCTCATTTCATGT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GCCATGGGTGACCCTACCCTTGAGCTCTTGAGGTGAACACATGGACACACGATCCAGTCCTGACCAAACAGAAT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ATCTCACTTCCCTGGCTACAGTTAGTGATAGGTTCAGGATTGTAGCAATGACCCAAGACTGGCTTCTGAGAGTC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ACATTTGAGACTGTGGCTCAAACTCTTAGAGAAGCACTCGTTTTTCAACTGAGACACTACAGTCTTTACTACTC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CTTGAAGACGGACTACCAGGAAGAAAGCCAACCTAGAGGGCTGCAAAGCTGAGCAGTGGAGAACAGCAAGTTCC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TGATGACATTGTTTGATGGCCTAAACCCCATTATACTTCCACTGGTTATCTCCCTGGACTTTCCTGTTACACAG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AAATTATCCCTTTTGTGTTGAAGCCAATTTGAATTGGATATCTGTCACTTACAACCAAAAAGGTCCAAATGTGC 1480
Query 1 --------------------------------------------------------------------ATGGAG 6
|..|||
Sbjct 1481 TAGTGAACACAGAGCACATACTGTGAGCAACTACTCTTTTTCTTCTTTCTTTCTTTCTTTTTTCTGAGACAGAG 1554
Query 7 TCTTGCTCTGTCACCCAGGCTGGAGTGCAATGGCGCGATCTCCACTCACTGCAACCTCTGCGTACCAGGTTCAA 80
||||.||||||||||||||||||||||||.|||.||.|||||..|||||||||||||||||.|.|..|||||||
Sbjct 1555 TCTTTCTCTGTCACCCAGGCTGGAGTGCAGTGGTGCAATCTCGGCTCACTGCAACCTCTGCCTCCTGGGTTCAA 1628
Query 81 GCGATTCTCCTGTCTCAGCCTCCTGAGTAGCTGGGATT----ACAGGTGCCCACCACCACAGCTGGCTAATTTT 150
|.||||||||||.||||||||||.|||||||||||||| |||.||| |||||||..|.||||||||||
Sbjct 1629 GTGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTATAGACACGTG----CCACCACGCCCGGCTAATTTT 1698
Query 151 TGTATTTTTAGTAGAGACTGGGTTTTACCATATTGGCCAGACTGGTCTCGAACTCCTGACCTCAGGTGGTCCGC 224
||||||.|||||||||||.||||||.|||||.||||||||.||||||||||||||||||||| .|||.||.||
Sbjct 1699 TGTATTCTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCT--TGTGATCTGC 1770
Query 225 CTGCCTTGGCTTCCCAAAGTGCTGGGATTATAGGAGTGAGCCACTGCGCCTGGC-------------------- 278
|..|||.|||.|||.|||||||||||||||.|||.|||||||||.|||||.|||
Sbjct 1771 CCACCTCGGCCTCCTAAAGTGCTGGGATTACAGGTGTGAGCCACCGCGCCCGGCCCGAGCACCTAAGCTTTTCA 1844
Query 279 ---CATT------------------------------------------------------------------- 282
||||
Sbjct 1845 AGACATTTCCAGAAAAACAAATGCAGGTAAGAAAGGATCAGTCTTCAAAGAACTTGGAAGCTGGTGAGGGATTA 1918
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1919 CAAAGATTCTCAAATAACTTTAAAACAAGTCAGAACACAATTGACAGCACAAGGCAGCTACCCGGGTTCTCTGG 1992
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1993 TTAATGCAAAGGGTGAGAATTTTCTATATTGGATGGAACACATCAGAAAAGTTCTCACGAAGGTGGTAGCAGTG 2066
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2067 AAATTGGCCTCAGAAGTCTGATAGGATGTTGGCAGGTGAAGGCAGGGAAGCTACAGGGCAGACAGCATGAGGAA 2140
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2141 GGGCCCAGGTTCAGGGAAGTATGGGCATGCAGGGGCAAGTGTAAATTGATGGGATTGCCTGGGACCAGAGGAAA 2214
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2215 GGTCTAAAACGTACAGTCTGAGGCTGGGGCGGGGTGGGGAAAGGATGGTTCTGAGGTATCTGAAGTATCTCCAA 2288
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2289 ATATCTGAAGATATTCCCCATGGAAAAGAAACTAGGCTTATTTGGAGTGACCCCAGAGGACAAGACTACGACTA 2362
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2363 AAAATGGACGCTCGCAAATGGAGGAAGTAGACCTGACCCCTGACTAAGGAAGATGGTGCTACCTGTTTGGGGCA 2436
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2437 AATGTTCAAAAAGAGGCTGTGTCTGTATGGTGGATGCTGTTAAAAGGGACTCAGAAACCAAATGAGAGTCTGAA 2510
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2511 TTAGCTGAGTTTAACATTCTGTGAGTTTTGTGCCAGACTTGGGACTACTGCAGAAGACCCTGGGAGAGTTGGGA 2584
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2585 TTGAATTCCAAAGGCAGTGCTGATGGACACTGACTTGAGGAGCCAGGAAAGAAGGCAGGAACAGTGGTGGGGAT 2658
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2659 CACAGCCTCACCTGTATCTGTGCACTTCTATAAATTCACAGACTGGGAATTTTTAATGTGAACTGGATATTAGA 2732
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2733 TGATGACCAGGAATTGTTTTAATTCTGTTAGGTGGGATAATACCATTCACTGTGCTGTGTAAGATAATGTCCAT 2806
Query 283 -------------------------------------------- 282
Sbjct 2807 ATTGTTTAGAGATGCATACTGAAGAATATAGGATGAAATGACAT 2850
