Nucleotide Global Alignment

Description

Query:
TRCN0000469746
Subject:
NR_133669.1
Aligned Length:
2679
Identities:
242
Gaps:
2406

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CAGCCGTTGACGGCAGCGGCACGTGAAAGTACCGACCTTTCTGGCCTTTGTGACGGACCTTTGGAGGCGGGTGG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TTTCAGATTCGTGCGCTCCGGCCTTTCAGTGTCTCTGGTGAGGTTGGGCCTGATAGGTTGAGAGCTGCCAGGGG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  AAGTTAAGGATGACTTCCAAGTTTTGAGGAAGAAGACCAGCTACAAGGAAATACTTCTGAAAAATCACTCTGAA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CCCCAAGCTGGAGTGAATCTTCTCCTGAGCTCTCTCATTCCAGAATGGCAATCTTGTTTCAGGAGAGATCTCTA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  ATAGTGACTGATGGTAAAGGAAGAAGGCTGTGCCTAGAACAAAGAATCAGGCTGGCAAAGAAATCACAGGTCTT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TCCTCAAACTTTAAATTGCTACTCTCTGGAGATAGCTACCTGGACTTTACAGAGCTGTCAGAAGACTTGGGAAG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GTTTGCCAGCATTGGAAAAAGCCACTTGGACTTCACAGAGCTGTCAGAAGACTTAGGAAGCTTTGCCAGTAGTT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CCTGAGACCAGAAATACATATTATGAAGCAGGTGCTGGAACAGGCCCTGGCCCCTACTTGTGAAGCTGCAGATA  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TAGATGGTGTTACTGAGAAGGAAACTAAGGACTTGGCTCCAAAACAAAACAAAACAAAATCTGGAGATGCTGAA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  TTTTGTTGGGGGGAATGTCTGTAGAACTGCAACATCAATGCAGTAAGTGTAGTAAAAGCTTTAGTTTATGGTGA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  GTCATTACTCAGCATCATGGAGTCCACGATGAAGAGAATCTCTTTTCAATCTGTGCAATCAACAAGTTTTTGAA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  AGGCTTTTGTTTATAGTGGAACCCTCTTTTCCCCCTAGAAGAACCACCACAAGGAAAAATGCTGTCACCATAAG  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  GAATGTGGGAAAGTTTTCAGCCACATGGCCTTATTTGACTTCAAAGAATCCACATGAGAGAGAGACTGCATAAA  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  TGTAATAACTGAGGAGGCCTTTGTTCAGCAAAGAAACCTTATACAAACTCGTATAAAGAATGTAGGAAGACCTT  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  CACCCAGAAGCCAGGACTGACTGTGCACCAGAGAATCTGCACAATAAACATGATGAATGTGGAGATGCTTGCTT  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  CAGCATTGGAGAATTCACAGTAAAGGGAAACCCTGCCAGTGTGATGAGTACGGAAAAGTCTTCAGAGGTTGGAA  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  CTTGGGAAAAATCAGTGAGTGAATTCATATTAGAGAGGCTCTTATAAATGAGAGGATTGTGGAAACTTGTATAG  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  ACAGAGATCAGACCTCAACAAGGGAGCCTCCACAGTATTGAAAAGTTAATATAATTAATGTAAGTGGGCAAGTT  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  GTATGGGGAATGGGTAGTCTAAATTGCTCATTTTAGCCAGTAAAAACATTAAATTAGTTTCTTAGATCAAGAAA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  AGGAAATGTTAGAAGTTATTTTTCCCTTCCAGAGGGGTCTATATGTGTAAGCAACCAGGACTTTTGAAATAAGT  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  TGCATCTCTGGATTTGTGATCTGTCTCCTGGATGATTATCTCTGTTTTGGGAGACAGGTATTTTTTCTTCATGC  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  CTGCTCTAGTCTCATCTCATATCTTTAATTCATTCAGCAAGTATACACAATAGTATTATCGTCTACTGTTTGTT  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  GTAAATATATATATATTATTTTCTTTTTGGTCTGAGTAGGCTTGTATTGGTACCCTAGGACATAAAAATCACAT  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  ATATCATGTTTCAGTAAATGCAGTGAAAGGAACTATATTATTAAATTGCTGGGAATTTCTGTAAATTTGAGACT  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  ACCTTTATATTCTCCAACACAAGACCGTGTAGGTGTCCCTTCAGAGAGTATATTTTTCTAGCTTGGCTTCTTTA  1850

Query    1  -------------------ATGGAGTCTTGCT-CTGTCACCCAGGCTGGAGTGCAATGGCGCGATCTCCACTCA  54
                               ||||||||||||| |||||.|||||||||||||||||||||.|||||||..||||
Sbjct 1851  TTTTCTTTATTTTTTTGAGATGGAGTCTTGCTCCTGTCGCCCAGGCTGGAGTGCAATGGCACGATCTCGGCTCA  1924

Query   55  CTGCAACCTCTGCGTACCAGGTTCAAGCGATTCTCCTGTCTCAGCCTCCTGAGTAGCTGGGATTACAGG----T  124
            ||||||||||.||.|.|||||||||||.||||||||||||||||.||||.|||||||||||||||||||    |
Sbjct 1925  CTGCAACCTCCGCCTCCCAGGTTCAAGTGATTCTCCTGTCTCAGTCTCCCGAGTAGCTGGGATTACAGGCACTT  1998

Query  125  GCCCACCA---CCACAGCTGGCTAATTTTTGTATTTTTAGTAGAGACTGGGTTTTACCATATTGGCCAGACTGG  195
            | ||||||   |||      |||||||||||||||||||||||||||.||||||.|||||.||||||||.||||
Sbjct 1999  G-CCACCATTCCCA------GCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGG  2065

Query  196  TCTCGAACTCCTGACCTCAGGTGGTCCGCCTGCCTTGGCTTCCCAAAGTGCTGGGATTATAGGAGTGAGCCACT  269
            |||||||||||||||||  .|||.||.|||..|||||||.|||||||||.|.|||||||.|||..||||||||.
Sbjct 2066  TCTCGAACTCCTGACCT--TGTGATCTGCCCACCTTGGCCTCCCAAAGTTCAGGGATTACAGGCATGAGCCACC  2137

Query  270  GCGCCTGGCCATT-------------------------------------------------------------  282
            ..|||.|||..||                                                             
Sbjct 2138  ATGCCCGGCTGTTTTTTTAAGATAGAAAAATATACTTCATGTATAGCCTATTGACAGATAATGACTGATATTTT  2211

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 2212  TTCTTATAGATAACACATAATAAACATTGTGAAGACTAATAAGTAACTTGCTTATTCTTTTCAGTTCTAAAACC  2285

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 2286  TGTAGGAAAGAATCTTTAGAAGCTGTCAACAAGTTGATAATGTAGCCCAATCTCTACCCATGATAGGAGAGTAA  2359

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 2360  GGCTTATATATTTTATAGTAGGGCACTAAATACAGGAACCATGTATTTAAAAACTTTTTAGTGATTATCTCAGA  2433

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 2434  ATTCTAGGTGTCCCTCTGCTGTACATCCCTAAATTTTTTGCATAGGTATTATTAATAAATTCATTATTTTCAAA  2507

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 2508  GATGGACTGTGTTCTGTAAAAAGCTTTTCCAGTATCTGCAAATCACACAGTTTTTTTTAACTCTATTACTATTA  2581

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 2582  TATAAAATGATTTCTTAATATTGAACCAACCTTGCATTCCTAGAATAAACCTCACTTAGCCATGAAAAAAAAAA  2655

Query  283  ---------------  282
                           
Sbjct 2656  AAAAAAAAAAAAAAA  2670

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