Nucleotide Global Alignment
Description
- Query:
- TRCN0000469746
- Subject:
- NR_135911.2
- Aligned Length:
- 3807
- Identities:
- 242
- Gaps:
- 3533
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTCATTCGAGGTCCGGGTCCGGCTTGCGGGGTCAGCGAACTGGAGAGGCGCCATGGGCTGGAGTAAGCCCCCCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCACCTTCCGTCCTCGATCGTTCCCCTTGTGGAAGTAGTCCCGGGTCTCGTGGGATCCTCGCCGCCCGCTCCCG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCCTGCGCTGTCGGTTCCCCCGCGCCTGGGCGGACCCTAACCCCACCCGGCCCTCCGCACCGCAGCCCCGGCTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CACCAGGTCCTCTGCAGACTGGCCGGACAGCCTGGCCTTTTCCAGCTCAGGTTCCTAATCTGTAAAATGGGCGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGCCGTGGGAAGGGGAGGAAGAGGCAGAAAGGCACTGGACTCCAGGAAAGGGGTCGGGGAACGTGCAGGGGTTT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGGCGCCAGACACACCACGTTCCGGCCAAGTGGCTCCTTACTGGCTGTGAACGTGGGCCAGTCACTGTCTCCAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GCCGCAATCTTCGGACTCATTCCGGAAGGCAGTGTAGCCTAATGGTGGAGGGTTCCGACTCTGGAGCCAGGGTT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GAAGTCCTCCCTCTTCCTGTGACTTTGAGCGAGTGACTTCACCCCTTGGGCCTCAGCTTCTTCATCTCCAAAAT 592
Query 1 -----------------------------------------------------------------------ATG 3
|
Sbjct 593 AATGGCAATCATACTACTGTTTTAGACACAGTAAGTGTTATAAACGTGTTTTTGTTTGTTTGTTTGAGACAA-- 664
Query 4 GAGTCTTGCTCTGTCACCCAGGCTGGAGTGCAATGGCGCGATCTCCACTCACTGCAACCTCTGCGTACCAGGTT 77
||||.||||||||||.||||||||||||||||..|||||||||||..|.|||||||.||||.||.|.||.||||
Sbjct 665 GAGTTTTGCTCTGTCGCCCAGGCTGGAGTGCAGCGGCGCGATCTCGGCCCACTGCAGCCTCCGCCTCCCGGGTT 738
Query 78 CAAGCGATTCTCCTGTCTCAGCCTCCTGAGTAGCTGGGATTACAG-GTGCCCACCACCACAGCTGGCTAATTTT 150
|||||.|||||||||.|||||||.||||||||||||||||||||| ||| |||||||||..|.||||||||||
Sbjct 739 CAAGCAATTCTCCTGCCTCAGCCACCTGAGTAGCTGGGATTACAGCGTG--CACCACCACGCCAGGCTAATTTT 810
Query 151 TGTATTTTTAGTAGAGACTGGGTTTTACCATATTGGCCAGACTGGTCTCGAACTCCTGACCTCAGGTGGTCCGC 224
||||||.|||||||||||.|||||||.||||.||||||||.|||||||||||||||||||||||||||.|||||
Sbjct 811 TGTATTCTTAGTAGAGACGGGGTTTTGCCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCGC 884
Query 225 CTGCCTTGGCTTCCCAAAGTGCTGGGATTATAGGAGTGAGCCACTGCGCCTGGCCATT---------------- 282
|.||||.|||.||.||||||||||.|||||.|||.|||||||||||||||.|| |
Sbjct 885 CCGCCTCGGCCTCTCAAAGTGCTGCGATTACAGGCGTGAGCCACTGCGCCCGG----TAGTAAACGTGTTTCTT 954
Query 283 -------------------------------------------------------------------------- 282
Sbjct 955 TAAGAATATACTAACAAACTGCAAGGTGATGCGGGATGTGAAGAGCTGGCAAAACTTGACCTGACTGTGAATTT 1028
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1029 CATTGGAGAGCTGAGCAGCATTAAAAACTTGCAGCACAATATCCATCTGAAGGAGCTCTTTCTCATGGGGAACC 1102
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1103 CATGTGCTTCCTTTGACCACTATAGGGAGTTCGTGGTAGCAACTCTTCCACAATTAAAGTTCCTCTTTAGAGAG 1176
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1177 CAAAGACCACCTACAGGCACCAGACACAGAGGAACACAACACAAAGAAATTAGACAACAGTGAAGATGACTTGG 1250
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1251 AATTCTGGAATAAGCCCTGTTTGTTTACTCCTGAATCAAGATTGGAAACTCTTAGACACATGGAAAAACAACGG 1324
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1325 AAGAAACAGGAAAAATTAAGTGAAAAAAAGAAGAAAGTGAAACCACCCAGGACTTTGATCACTGAAGATGGGAA 1398
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1399 AGCCCTAAATGTGAATGAGCCCAAAATTGACTTCTCTTTGAAAGATAACGAAAAGCAGATCATCCTGGACCTTG 1472
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1473 CTGTCTATAGGTATATGGATACCTCTTTAATCGATGTTGATGTGCAACCAACTTACGTGCGAGTAATGATCAAA 1546
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1547 GGAAAGCCATTTCAGCTTGTCCTTCCTGCAGAAGTGAAACCCGATAGTAGTTCTGCTAAAAGATCTCAGACAAC 1620
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1621 GGGTCATTTGGTCATCTGCATGCCCAAGGTAGGAGAAGTAATCACAGGTGGTCAGCGAGCATTCAAATCTATGA 1694
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1695 AAACTACCTCGGACAGGAGCAGAGAACAAACAAATACAAGAAGCAAGCACATGGAGAAACTAGAAGTAGACCCT 1768
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1769 AGCAAGCACTCATTCCCTGATGTGACTAACATAGTTCAAGAGAAAAAACACACACCCAGAAGACGACCTGAACC 1842
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1843 CAAAATTATACCAAGTGAGGAAGACCCAACCTTTGAAGACAACCCTGAAGTGCCTCCGCTGATTTGAAACATCT 1916
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1917 GGCTGCGTTGCCATTGGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCT 1990
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1991 GGGATAAACACAGAGTTATTTGTCAATATCGCTGCTCCAGTGTTTTAACTCTTACTTTGCATAGTAATATCCTT 2064
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2065 AAGATAGCTTAAAATTAAAATGTATGTCTTAAATGCTATAACTCATCATTTACCTATAATAAAGGGTTGGTATT 2138
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2139 GAAAATGTTTAGTAAGATCATAGAACTATTGCATAAAACACTGATTATAAATACTGTCTACTTATGCAAAGTAT 2212
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2213 TAATTCATAGATAAAAGGACTGAGTATTAAATTGGTACTTCAGCAAAGTGGTCAAGCTTAGAAGTTAAAACTGT 2286
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2287 AATTTCAGACCCAATTGGAATACTTTAATATGATTTTAAACAGCATTTCCATTTTCCTTCCCATGATGTGTCTG 2360
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2361 CTTTCTCTGGTGGCATGGTATAATGGCAAGAATATGAGTTTTGAAACCAGACACTCTATATTTGGATTCCAGCT 2434
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2435 CAATCACTTTGTAAAGACCTTCAGCAAGTCCTTTAATTCTCTGAGCCTTAGTGGCTTCATGTATAATCTGGGAA 2508
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2509 TAATAACACTTGCCTCACAGGTTTGTCTCAAGATAAACTGCAGAAAGCACTTAGTACAGTGTCAGCCATACATT 2582
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2583 TAGAGCCTCTTCTCTCTCTCCTTCTTCCCTTTCTCCTCTCTCTTCTCCTCCCTTTCTCCTGTCTCTCCTCCTCC 2656
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2657 CTGCTCCTTCTTCCCCTCCCTCCCCAATTACTTTTCTCCCCTTATTCTTTTTCTTCACCTTTTTACTCCCCATC 2730
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2731 CCACTCCTTCTCCTCTATTTCCTTCTTTACTTTTTTAATATCCTACCTCTTCTTTATCTAGAACATTATGAATT 2804
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2805 CAATATTTCACATACATTGTAGGACAAATTACTGTTACTCTGATCATGATATAGCAACATTTAAGTCAGTTTCC 2878
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2879 CCAAATATTCATTCAACAAATACTTATTGAGCAACTATTGAGTGCTAGCCCCCTCTCTGTTCATCAGGGATTTA 2952
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2953 GTAGTAACAAAGCAGACAAATACATACACACAGACTATGTCAGGTGGTGTTCAGAGCTGTGAAGGAGAGTCAGA 3026
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3027 GTGAGGGAATCAAGGGTGATGGGTGCTTTTTCAGACAGGGCCTTTCTCTATTAAACAGGCTTCCAGTGGAAGAC 3100
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3101 TCTGCTAATGTTTAGCAGATAACCAAAATGCATCAGTTAGAAAAAAATATGATGAGAATGAGGGACTGGTTATA 3174
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3175 GGAATGCAATTGGGCACAAATGTGGGAAGAGCTGGGTAGTGAAGCTCTAGAAGGGAGAGGTAGAGAATTGGAAG 3248
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3249 AAGAAGCACTGGTACAGGTAGACAATTCAGAACTTGCACAGAATCTGAGAAGCTGAAGTAGGACTGTGATTGGG 3322
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3323 AGCTTGTGGAGAGGTCTATGGAAATTATCATGCTGCTGAAATTGTTGCCTCTATTTATCTGCTACCCTTCTGGT 3396
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3397 CCGTGGCCAAGATCCTGGTGGGTGGGCTTGGAGCCAGCCTTCGTCAGCAGGCCTGCGGTAAGAAAGATGGGATG 3470
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3471 GACACACAGTGGTGGAGATCAAGGATCAGCTGCAGCAGGCTGGGTCCCTCTGCATCTGTCCATCACTGCGACTG 3544
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3545 ATGGCAATGACTGAGTATAACACCTTTCTTCATGGTCAACTCTACCCAGGAACCACGTAGGGAAGGAAATTCTG 3618
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3619 GAAAACAGCTCCCAGCCTTAGCCAACTTGACATATCATAATCCAACAGAACTCAACCTCTACCAACTTGGAAAT 3692
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3693 CATGTACATTTGTCAGGACTGTATTTAATTTCCACATAGAGAGAAAGCAAAATTATACTTTTGACCAAACTAAT 3766
Query 283 --------------------------------- 282
Sbjct 3767 AGAATTATCCATTAAACAAACAAAACTGTGCCA 3799
