Nucleotide Global Alignment
Description
- Query:
- TRCN0000469746
- Subject:
- NR_135912.2
- Aligned Length:
- 4366
- Identities:
- 242
- Gaps:
- 4092
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTCATTCGAGGTCCGGGTCCGGCTTGCGGGGTCAGCGAACTGGAGAGGCGCCATGGGCTGGAGTAAGCCCCCCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCACCTTCCGTCCTCGATCGTTCCCCTTGTGGAAGTAGTCCCGGGTCTCGTGGGATCCTCGCCGCCCGCTCCCG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCCTGCGCTGTCGGTTCCCCCGCGCCTGGGCGGACCCTAACCCCACCCGGCCCTCCGCACCGCAGCCCCGGCTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CACCAGGTCCTCTGCAGACTGGCCGGACAGCCTGGCCTTTTCCAGCTCAGGTTCCTAATCTGTAAAATGGGCGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGCCGTGGGAAGGGGAGGAAGAGGCAGAAAGGCACTGGACTCCAGGAAAGGGGTCGGGGAACGTGCAGGGGTTT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGGCGCCAGACACACCACGTTCCGGCCAAGTGGCTCCTTACTGGCTGTGAACGTGGGCCAGTCACTGTCTCCAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GCCGCAATCTTCGGACTCATTCCGGAAGGCAGTGTAGCCTAATGGTGGAGGGTTCCGACTCTGGAGCCAGGGTT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GAAGTCCTCCCTCTTCCTGTGACTTTGAGCGAGTGACTTCACCCCTTGGGCCTCAGCTTCTTCATCTCCAAAAT 592
Query 1 -----------------------------------------------------------------------ATG 3
|
Sbjct 593 AATGGCAATCATACTACTGTTTTAGACACAGTAAGTGTTATAAACGTGTTTTTGTTTGTTTGTTTGAGACAA-- 664
Query 4 GAGTCTTGCTCTGTCACCCAGGCTGGAGTGCAATGGCGCGATCTCCACTCACTGCAACCTCTGCGTACCAGGTT 77
||||.||||||||||.||||||||||||||||..|||||||||||..|.|||||||.||||.||.|.||.||||
Sbjct 665 GAGTTTTGCTCTGTCGCCCAGGCTGGAGTGCAGCGGCGCGATCTCGGCCCACTGCAGCCTCCGCCTCCCGGGTT 738
Query 78 CAAGCGATTCTCCTGTCTCAGCCTCCTGAGTAGCTGGGATTACAG-GTGCCCACCACCACAGCTGGCTAATTTT 150
|||||.|||||||||.|||||||.||||||||||||||||||||| ||| |||||||||..|.||||||||||
Sbjct 739 CAAGCAATTCTCCTGCCTCAGCCACCTGAGTAGCTGGGATTACAGCGTG--CACCACCACGCCAGGCTAATTTT 810
Query 151 TGTATTTTTAGTAGAGACTGGGTTTTACCATATTGGCCAGACTGGTCTCGAACTCCTGACCTCAGGTGGTCCGC 224
||||||.|||||||||||.|||||||.||||.||||||||.|||||||||||||||||||||||||||.|||||
Sbjct 811 TGTATTCTTAGTAGAGACGGGGTTTTGCCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCGC 884
Query 225 CTGCCTTGGCTTCCCAAAGTGCTGGGATTATAGGAGTGAGCCACTGCGCCTGGCCATT---------------- 282
|.||||.|||.||.||||||||||.|||||.|||.|||||||||||||||.|| |
Sbjct 885 CCGCCTCGGCCTCTCAAAGTGCTGCGATTACAGGCGTGAGCCACTGCGCCCGG----TAGTAAACGTGTTTCTT 954
Query 283 -------------------------------------------------------------------------- 282
Sbjct 955 TAAGAATATACTAACAAACTGCAAGGTGATGCGGTCACAGAAGATCTTATTAGACGGAATGCTGAACACAACGA 1028
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1029 CTGTGTCATTTTTTCCCTGGAGGAACTCTCGTTGCATCAGCAAGAAATAGAAAGACTAGAACACATTGATAAAT 1102
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1103 GGTGCCGGGATTTAAAAATTCTCTATCTTCAAAATAATCTTATTGGGAAAATTGAAAATGTTAGCAAACTCAAG 1176
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1177 AAACTTGAATATTTGAATTTAGCTTTAAACAACATTGAAAAAATAGAAAACTTGGAAGATGTCATCTATTGACT 1250
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1251 TCCTGATGTGGACGATGCAGATTTTGTTCTCTCACACCATCTGCAAGGTTCTCAATTTTCTCCTACCCACCCTC 1324
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1325 CGTGTATTTTCATATGACATTGACAGGATATCATAATGAAATATGGCATACGGACCCATTTACGGGGACTGGTC 1398
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1399 TTTTGAATTAACTGTGTTGGGAGAGGATATTACACTTGCTCCCCAACTCTCCCACATCTAATCTCTGGCCTTTC 1472
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1473 TTATCCTACCTGCCTCCTCCTGCCTTCTTCCAAGCTGGTCTCTCCATCTCCACCTGTGTCATGAATTCCAGGCA 1546
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1547 GGATGTGAAGAGCTGGCAAAACTTGACCTGACTGTGAATTTCATTGGAGAGCTGAGCAGCATTAAAAACTTGCA 1620
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1621 GCACAATATCCATCTGAAGGAGCTCTTTCTCATGGGGAACCCATGTGCTTCCTTTGACCACTATAGGGAGTTCG 1694
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1695 TGGTAGCAACTCTTCCACAATTAAAGTTCCTCTTTAGAGAGCAAAGACCACCTACAGGCACCAGACACAGAGGA 1768
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1769 ACACAACACAAAGAAATTAGACAACAGTGAAGATGACTTGGAATTCTGGAATAAGCCCTGTTTGTTTACTCCTG 1842
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1843 AATCAAGATTGGAAACTCTTAGACACATGGAAAAACAACGGAAGAAACAGGAAAAATTAAGTGAAAAAAAGAAG 1916
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1917 AAAGTGAAACCACCCAGGACTTTGATCACTGAAGATGGGAAAGCCCTAAATGTGAATGAGCCCAAAATTGACTT 1990
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1991 CTCTTTGAAAGATAACGAAAAGCAGATCATCCTGGACCTTGCTGTCTATAGGTATATGGATACCTCTTTAATCG 2064
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2065 ATGTTGATGTGCAACCAACTTACGTGCGAGTAATGATCAAAGGAAAGCCATTTCAGCTTGTCCTTCCTGCAGAA 2138
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2139 GTGAAACCCGATAGTAGTTCTGCTAAAAGATCTCAGACAACGGGTCATTTGGTCATCTGCATGCCCAAGGTAGG 2212
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2213 AGAAGTAATCACAGGTGGTCAGCGAGCATTCAAATCTATGAAAACTACCTCGGACAGGAGCAGAGAACAAACAA 2286
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2287 ATACAAGAAGCAAGCACATGGAGAAACTAGAAGTAGACCCTAGCAAGCACTCATTCCCTGATGTGACTAACATA 2360
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2361 GTTCAAGAGAAAAAACACACACCCAGAAGACGACCTGAACCCAAAATTATACCAAGTGAGGAAGACCCAACCTT 2434
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2435 TGAAGACAACCCTGAAGTGCCTCCGCTGATTTGAAACATCTGGCTGCGTTGCCATTGGCTGAGACCCACCAGGT 2508
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2509 CCAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAACACAGAGTTATTTGTCAATATCGCT 2582
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2583 GCTCCAGTGTTTTAACTCTTACTTTGCATAGTAATATCCTTAAGATAGCTTAAAATTAAAATGTATGTCTTAAA 2656
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2657 TGCTATAACTCATCATTTACCTATAATAAAGGGTTGGTATTGAAAATGTTTAGTAAGATCATAGAACTATTGCA 2730
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2731 TAAAACACTGATTATAAATACTGTCTACTTATGCAAAGTATTAATTCATAGATAAAAGGACTGAGTATTAAATT 2804
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2805 GGTACTTCAGCAAAGTGGTCAAGCTTAGAAGTTAAAACTGTAATTTCAGACCCAATTGGAATACTTTAATATGA 2878
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2879 TTTTAAACAGCATTTCCATTTTCCTTCCCATGATGTGTCTGCTTTCTCTGGTGGCATGGTATAATGGCAAGAAT 2952
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2953 ATGAGTTTTGAAACCAGACACTCTATATTTGGATTCCAGCTCAATCACTTTGTAAAGACCTTCAGCAAGTCCTT 3026
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3027 TAATTCTCTGAGCCTTAGTGGCTTCATGTATAATCTGGGAATAATAACACTTGCCTCACAGGTTTGTCTCAAGA 3100
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3101 TAAACTGCAGAAAGCACTTAGTACAGTGTCAGCCATACATTTAGAGCCTCTTCTCTCTCTCCTTCTTCCCTTTC 3174
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3175 TCCTCTCTCTTCTCCTCCCTTTCTCCTGTCTCTCCTCCTCCCTGCTCCTTCTTCCCCTCCCTCCCCAATTACTT 3248
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3249 TTCTCCCCTTATTCTTTTTCTTCACCTTTTTACTCCCCATCCCACTCCTTCTCCTCTATTTCCTTCTTTACTTT 3322
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3323 TTTAATATCCTACCTCTTCTTTATCTAGAACATTATGAATTCAATATTTCACATACATTGTAGGACAAATTACT 3396
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3397 GTTACTCTGATCATGATATAGCAACATTTAAGTCAGTTTCCCCAAATATTCATTCAACAAATACTTATTGAGCA 3470
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3471 ACTATTGAGTGCTAGCCCCCTCTCTGTTCATCAGGGATTTAGTAGTAACAAAGCAGACAAATACATACACACAG 3544
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3545 ACTATGTCAGGTGGTGTTCAGAGCTGTGAAGGAGAGTCAGAGTGAGGGAATCAAGGGTGATGGGTGCTTTTTCA 3618
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3619 GACAGGGCCTTTCTCTATTAAACAGGCTTCCAGTGGAAGACTCTGCTAATGTTTAGCAGATAACCAAAATGCAT 3692
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3693 CAGTTAGAAAAAAATATGATGAGAATGAGGGACTGGTTATAGGAATGCAATTGGGCACAAATGTGGGAAGAGCT 3766
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3767 GGGTAGTGAAGCTCTAGAAGGGAGAGGTAGAGAATTGGAAGAAGAAGCACTGGTACAGGTAGACAATTCAGAAC 3840
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3841 TTGCACAGAATCTGAGAAGCTGAAGTAGGACTGTGATTGGGAGCTTGTGGAGAGGTCTATGGAAATTATCATGC 3914
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3915 TGCTGAAATTGTTGCCTCTATTTATCTGCTACCCTTCTGGTCCGTGGCCAAGATCCTGGTGGGTGGGCTTGGAG 3988
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3989 CCAGCCTTCGTCAGCAGGCCTGCGGTAAGAAAGATGGGATGGACACACAGTGGTGGAGATCAAGGATCAGCTGC 4062
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4063 AGCAGGCTGGGTCCCTCTGCATCTGTCCATCACTGCGACTGATGGCAATGACTGAGTATAACACCTTTCTTCAT 4136
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4137 GGTCAACTCTACCCAGGAACCACGTAGGGAAGGAAATTCTGGAAAACAGCTCCCAGCCTTAGCCAACTTGACAT 4210
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4211 ATCATAATCCAACAGAACTCAACCTCTACCAACTTGGAAATCATGTACATTTGTCAGGACTGTATTTAATTTCC 4284
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4285 ACATAGAGAGAAAGCAAAATTATACTTTTGACCAAACTAATAGAATTATCCATTAAACAAACAAAACTGTGCCA 4358
