Nucleotide Global Alignment
Description
- Query:
- TRCN0000469746
- Subject:
- NR_136511.2
- Aligned Length:
- 3185
- Identities:
- 242
- Gaps:
- 2912
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACTTTTGATGGGTTCCGGGTCCCAAAAGGGTTCGAGGCCTCTTGCCTTCGCTCCGTAGGAGGGAGTTCTCTTCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGCCCTGGGGGCCGCAGGACTGTCCAGGAATACAGTTTCCAGGTGAGATCTTACTTGAAACACCGGTAGTTCTA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCACAGCTAAAATGGCATCTACTTGGGCTATCCAGGCCCACATGGACCAGGATGAACCTTTGGAAGTAAAGATA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GAGGAAGAGAAATATACCACCAGACAGGATTGGGACCTGCGTAAAAACAACACCCATAGCAGAGAGGTCTTCCG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCAGTACTTCAGACAGTTCTGCTACCAGGAGACATCTGGTCCCCGTGAGGCTTTGAGCCGACTCCGAGAACTTT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCCATCAGTGGCTGAGGCCAGAGACCCACACCAAAGAACAGATTCTGGAGCTGCTGGTGCTGGAGCAGTTCCTG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ACCATCCTACCTGAGGAGCTCCAGGCCTGGGTGCAGGAGCAGCATCCAGAGAGTGGGGAGGAGGTGGTGACTGT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GCTGGAGGATTTAGAGAGAGAACTGGATGAACCAGGAGAGCAGGTCTCAGTCCACACTGGGGAACAGGAAATGT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TCTTGCAGGAGACGGTACGTCTACGAAAAGAAGGAGAACCCAGTATGTCCCTCCAGTCCATGAAAGCCCAGCCA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AAGTATGAATCTCCAGAACTTGAATCCCAACAGGAGCAAGGAAGAAGACCAGCTACAAGGAAATACTTCTGAAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AATCACTCTGAACCCCAAGCTGGAGTGAATCTTCTCCTGAGCTCTCTCATTCCAGAATGGCAATCTTGTTTCAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GAGAGATCTCTAATAGTGACTGATGGTAAAGGAAGAAGGCTGTGCCTAGAACAAAGAATCAGGCTGGCAAAGAA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ATCACAGGTCTTTCCTCAAACTTTAAATTGCTACTCTCTGGAGATAGCTACCTGGACTTTACAGAGCTGTCAGA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AGACTTGGGAAGGTTTGCCAGCATTGGAAAAAGCCACTTGGACTTCACAGAGCTGTCAGAAGACTTAGGAAGCT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TTGCCAGTAGTTCCTGAGACCAGAAATACATATTATGAAGCAGGTGCTGGAACAGGCCCTGGCCCCTACTTGTG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AAGCTGCAGATATAGATGGTGTTACTGAGAAGGAAACTAAGGACTTGGCTCCAAAACAAAACAAAACAAAATCT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GGAGATGCTGAATTTTGTTGGGGGGAATGTCTGTAGAACTGCAACATCAATGCAGTAAGTGTAGTAAAAGCTTT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AGTTTATGGTGAGTCATTACTCAGCATCATGGAGTCCACGATGAAGAGAATCTCTTTTCAATCTGTGCAATCAA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CAAGTTTTTGAAAGGCTTTTGTTTATAGTGGAACCCTCTTTTCCCCCTAGAAGAACCACCACAAGGAAAAATGC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TGTCACCATAAGGAATGTGGGAAAGTTTTCAGCCACATGGCCTTATTTGACTTCAAAGAATCCACATGAGAGAG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AGACTGCATAAATGTAATAACTGAGGAGGCCTTTGTTCAGCAAAGAAACCTTATACAAACTCGTATAAAGAATG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TAGGAAGACCTTCACCCAGAAGCCAGGACTGACTGTGCACCAGAGAATCTGCACAATAAACATGATGAATGTGG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 AGATGCTTGCTTCAGCATTGGAGAATTCACAGTAAAGGGAAACCCTGCCAGTGTGATGAGTACGGAAAAGTCTT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CAGAGGTTGGAACTTGGGAAAAATCAGTGAGTGAATTCATATTAGAGAGGCTCTTATAAATGAGAGGATTGTGG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 AAACTTGTATAGACAGAGATCAGACCTCAACAAGGGAGCCTCCACAGTATTGAAAAGTTAATATAATTAATGTA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 AGTGGGCAAGTTGTATGGGGAATGGGTAGTCTAAATTGCTCATTTTAGCCAGTAAAAACATTAAATTAGTTTCT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TAGATCAAGAAAAGGAAATGTTAGAAGTTATTTTTCCCTTCCAGAGGGGTCTATATGTGTAAGCAACCAGGACT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TTTGAAATAAGTTGCATCTCTGGATTTGTGATCTGTCTCCTGGATGATTATCTCTGTTTTGGGAGACAGGTATT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TTTTCTTCATGCCTGCTCTAGTCTCATCTCATATCTTTAATTCATTCAGCAAGTATACACAATAGTATTATCGT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CTACTGTTTGTTGTAAATATATATATATTATTTTCTTTTTGGTCTGAGTAGGCTTGTATTGGTACCCTAGGACA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TAAAAATCACATATATCATGTTTCAGTAAATGCAGTGAAAGGAACTATATTATTAAATTGCTGGGAATTTCTGT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 AAATTTGAGACTACCTTTATATTCTCCAACACAAGACCGTGTAGGTGTCCCTTCAGAGAGTATATTTTTCTAGC 2368
Query 1 -------------------------------ATGGAGTCTTGCT-CTGTCACCCAGGCTGGAGTGCAATGGCGC 42
||||||||||||| |||||.|||||||||||||||||||||.|
Sbjct 2369 TTGGCTTCTTTATTTTCTTTATTTTTTTGAGATGGAGTCTTGCTCCTGTCGCCCAGGCTGGAGTGCAATGGCAC 2442
Query 43 GATCTCCACTCACTGCAACCTCTGCGTACCAGGTTCAAGCGATTCTCCTGTCTCAGCCTCCTGAGTAGCTGGGA 116
||||||..||||||||||||||.||.|.|||||||||||.||||||||||||||||.||||.||||||||||||
Sbjct 2443 GATCTCGGCTCACTGCAACCTCCGCCTCCCAGGTTCAAGTGATTCTCCTGTCTCAGTCTCCCGAGTAGCTGGGA 2516
Query 117 TTACAGG----TGCCCACCA---CCACAGCTGGCTAATTTTTGTATTTTTAGTAGAGACTGGGTTTTACCATAT 183
||||||| || |||||| ||| |||||||||||||||||||||||||||.||||||.|||||.|
Sbjct 2517 TTACAGGCACTTG-CCACCATTCCCA------GCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGT 2583
Query 184 TGGCCAGACTGGTCTCGAACTCCTGACCTCAGGTGGTCCGCCTGCCTTGGCTTCCCAAAGTGCTGGGATTATAG 257
|||||||.||||||||||||||||||||| .|||.||.|||..|||||||.|||||||||.|.|||||||.||
Sbjct 2584 TGGCCAGGCTGGTCTCGAACTCCTGACCT--TGTGATCTGCCCACCTTGGCCTCCCAAAGTTCAGGGATTACAG 2655
Query 258 GAGTGAGCCACTGCGCCTGGCCATT------------------------------------------------- 282
|..||||||||...|||.|||..||
Sbjct 2656 GCATGAGCCACCATGCCCGGCTGTTTTTTTAAGATAGAAAAATATACTTCATGTATAGCCTATTGACAGATAAT 2729
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2730 GACTGATATTTTTTCTTATAGATAACACATAATAAACATTGTGAAGACTAATAAGTAACTTGCTTATTCTTTTC 2803
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2804 AGTTCTAAAACCTGTAGGAAAGAATCTTTAGAAGCTGTCAACAAGTTGATAATGTAGCCCAATCTCTACCCATG 2877
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2878 ATAGGAGAGTAAGGCTTATATATTTTATAGTAGGGCACTAAATACAGGAACCATGTATTTAAAAACTTTTTAGT 2951
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2952 GATTATCTCAGAATTCTAGGTGTCCCTCTGCTGTACATCCCTAAATTTTTTGCATAGGTATTATTAATAAATTC 3025
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3026 ATTATTTTCAAAGATGGACTGTGTTCTGTAAAAAGCTTTTCCAGTATCTGCAAATCACACAGTTTTTTTTAACT 3099
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3100 CTATTACTATTATATAAAATGATTTCTTAATATTGAACCAACCTTGCATTCCTAGAATAAACCTCACTTAGCCA 3173
Query 283 --- 282
Sbjct 3174 TGA 3176