Nucleotide Global Alignment
Description
- Query:
- TRCN0000469746
- Subject:
- NR_156186.2
- Aligned Length:
- 6071
- Identities:
- 241
- Gaps:
- 5794
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTGACCCTAGTCGGCCGCTGAGAGGCGCGCGGAGTCTGGGCCGCTGCCGTCTAGGGGTCCCGTCCCGAGGCGTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCCGGCATCTCCGGCCCGAATCCCGGAGTGCCGGGTCGCGCCTGCACCGAAGGTCCCGGCTCCTGTGCCCTCCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGCAGCCGTCAGGGCCCGTCCCCCAACTCCCCTTTCCGCTCAGGCAGGGTCCTCGCGGCCCATGCTGGCCGCTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGGACCCGCGCAGCCCAGACCGTTCCCGGGCCGGGCAGCCGGCCACCATGGTGGCCCTGAGGCCTGTGCAGCAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTCCAGGGGGGCTAAAGGGCTCAGAGTGCAGGCCGTGGGGCGCGAGGGTCCCGGGCCTGAGCCCCGCGCCATGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CCGGGGCCATCGCTTCCCGCATGAGCTTCAGCTCTCTCAAGAGGAAGCAACCCAAGACGTTCACCGTGAGGATC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GTCACCATGGACGCCGAGATGGAGTTCAATTGCGAGTCTTGCTCTGTCACCCTAGCTGGAGTGCAGTGGCGTGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TCTTGGTTTACTGCAACCTCTGCCTCCCAAGTTCAAGCGATTCTCCTGCCTCAGCTTCCCAAGTAGCTGGGACT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ACAGATGAAGTGGAAAGGGAAGGACCTCTTTGATTTGGTGTGCCGGACTCTGGGGCTCCGAGAAACCTGGTTCT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TTGGACTGCAGTACACAATCAAGGACACAGTGGCCTGGCTCAAAATGGACAAGAAGGTACTGGATCATGATGTT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TCAAAGGAAGAACCAGTCACCTTTCACTTCTTGGCCAAATTTTATCCTGAGAATGCTGAAGAGGAGCTGGTTCA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GGAGATCACACAACATTTATTCTTCTTACAGGTAAAGAAGCAGATTTTAGATGAAAAGATCTACTGCCCTCCTG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AGGCTTCTGTGCTCCTGGCTTCTTACGCCGTCCAGGCCAAGTATGGTGACTACGACCCCAGTGTTCACAAGCGG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GGATTTTTGGCCCAAGAGGAATTGCTTCCAAAAAGGGTAATAAATCTGTATCAGATGACTCCGGAAATGTGGGA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GGAGAGAATTACTGCTTGGTACGCAGAGCACCGAGGCCGAGCCAGGGATGAAGCTGAAATGGAATATCTGAAGA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TAGCTCAGGACCTGGAGATGTACGGTGTGAACTACTTTGCAATCCGGAATAAAAAGGGCACAGAGCTGCTGCTT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GGAGTGGATGCCCTGGGGCTTCACATTTATGACCCTGAGAACAGACTGACCCCCAAGATCTCCTTCCCGTGGAA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TGAAATCCGAAACATCTCGTACAGTGACAAGGAGTTTACTATTAAACCACTGGATAAGAAAATTGATGTCTTCA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AGTTTAACTCCTCAAAGCTTCGTGTTAATAAGCTGATTCTCCAGCTATGTATCGGGAACCATGATCTATTTATG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AGGAGAAGGAAAGCCGATTCTTTGGAAGTTCAGCAGATGAAAGCCCAGGCCAGGGAGGAGAAGGCTAGAAAGCA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GATGGAGCGGCAGCGCCTCGCTCGAGAGAAGCAGATGAGGGAGGAGGCTGAACGCACGAGGGATGAGTTGGAGA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GGAGGCTGCTGCAGATGAAAGAAGAAGCAACAATGGCCAACGAAGCACTGATGCGGTCTGAGGAGACAGCTGAC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CTGTTGGCTGAAAAGGCCCAGATCACCGAGGAGGAGGCAAAACTTCTGGCCCAGAAGGCCGCAGAGGCTGAGCA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GGAAATGCAGCGCATCAAGGCCACAGCGATTCGCACGGAGGAGGAGAAGCGCCTGATGGAGCAGAAGGTGCTGG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 AAGCCGAGGTGCTGGCACTGAAGATGGCTGAGGAGTCAGAGAGGAGGGCCAAAGAGGCAGATCAGCTGAAGCAG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GACCTGCAGGAAGCACGCGAGGCGGAGCGAAGAGCCAAGCAGAAGCTCCTGGAGATTGCCACCAAGCCCACGTA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CCCGCCCATGAACCCAATTCCAGCACCGTTGCCTCCTGACATACCAAGCTTCAACCTCATTGGTGACAGCCTGT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CTTTCGACTTCAAAGATACTGACATGAAGCGGCTTTCCATGGAGATAGAGAAAGAAAAAGTGGAATACATGGAA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 AAGAGCAAGCATCTGCAGGAGCAGCTCAATGAACTCAAGACAGAAATCGAGGCCTTGAAACTGAAAGAGAGGGA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 GACAGCTCTGGATATTCTGCACAATGAGAACTCCGACAGGGGTGGCAGCAGCAAGCACAATACCATTAAAAAGC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TCACCTTGCAGAGCGCCAAGTCCCGAGTGGCCTTCTTTGAAGAGCTCTAGCAGGTGACCCAGCCACCCCAGGAC 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 CTGCCACTTCTCCTGCTACCGGGACCGCGGGATGGACCAGATATCAAGAGAGCCATCCATAGGGAGCTGGCTGG 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 GGGTTTCCGTGGGAGCTCCAGAACTTTCCCCAGCTGAGTGAAGAGCCCAGCCCCTCTTATGTGCAATTGCCTTG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 AACTACGACCCTGTAGAGATTTCTCTCATGGCGTTCTAGTTCTCTGACCTGAGTCTTTGTTTTAAGAAGTATTT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 GTCTTCCTTTGTCTAATGTGGGATTCCTGACTCCCTTCGTCCAAGGCACCGGTGTGTGTGTGTCTTGCACTCCA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 GAGCTGACCTCCACCGCCCAGCCTGGGAAGTCATTGTAGGGAGTGAGACACTGAAGCCCTGAGAAGCCAGTGCC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 ATCATCCCCACCCCGCCCAGGGTTCCGGAACATTCATTCCCCCACCGGTGAGGACCTGGCATGCAGCGAAGCAG 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 CCCAGCCCGGCGGATCCCAGGCCAGCACGCCTGCCGGCTTCTCATCGTCAGGGAGCCCGCCCAGAGCTCGTGAC 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 GAGCAAGTGCTGGGTCCCCGCCAGGCACCCCGAGGCGGCGCTCTGGCTGGCAGCTGGTGGGGAATAGGCAGGGC 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 AGCTGTGGCTGGGGAGAGACTTTAGGCAGAAGCTGTGATGCAGGCTGACTGCCAGCCGAGGGGCTGGGTAGTGC 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 CGTGCGGGAGCTGATGGTACAGGGCACTCGCTGTCCCCCTCCGGCCACCCTAGACCAGGGTCCGAGAGGCAGGC 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 AGGAGCCACTCATGTCTTCCCCATTGCCCGACGCCCATAGACGCTCCTTCCTGTGTGGGGCTGGGGTACTCCCT 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 GGTCGTACTGCAGTCAGCACCCGTAACCCGGCTATGACCAGGGATCTGTAAGCCCTGTGGCTCCACAGGTGCTG 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 CTTCTCACTGGCCCAGACTCTGAGCTCCACCGGCCCAGTCTGCACGGCCCATCTGCTTCACCTTCCCTCCCAGC 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 CACGTGCCAGTGGCCACAGCCCACTTCCCAACCCACTGTTGTACCCAGGCCTCACTTTGCTGTTGCCCTTGTCC 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 CTCTTCGGGCCCTGAATTTTCTGTTCCCTGGGGGCCAGCCAGGGCCCTTTGTGCCCCTCCCAGCACAGGCCTGA 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 TGCAGGTGTCCACTCACAGGTGGCGCTCACCTAGGCTGTCACAGGACCCACCTCCATGCCAGGCAACAGAGGGC 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 CACAGAACCACCCCCACGGCTCACTCCTTGGTCTGGGGCCACCTTCTTGCCCTTTCTTTTTTTTTTTTTTTTTT 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 TTTTTCCGAGATGGAGTCTCTCTCTGTCACCCAGGTGGGAGTGTGGTGGCACAATCTCGGCTCACTGCAACCTC 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 CACCTCCTGAGTTCAAGCAATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCATGCACCACCACAC 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 TTGGCCAATGTTCTGTATTTTTAATAGGGACGGGGTTTTGCCATGTTAGCTAGGCTGGTCTCAAACTCACACCT 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 GGGATTACAGGCATGAGCCACTGCACCCAGCCCCTTCTTGCCCTTTCTTTTCTCCATGGCTGATGCTGCTGTGG 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 CCAGCCAGGGCCCTTGAGATCCTTCCAGTTTGGCTGTTATGCAAAGCAGGTGATTTGTCTTAATCAGATAAAAG 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 ATAGAGGCTATGGGGGCCTCAAGATTTTTGGAGAGCAGAGGTGGTCTCTGGCAATTCCATCTGGTTTTGAGAAA 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 CTTAGCAGCTCACAGAGCACAGAGATCCTGCCTTCTTCCTACTATCAGGCTGACCTAATGGGGTTGGGCTGCTC 4070
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4071 GGCAACTGCTTGGGTCACCTTGCCCCAAGGAAACCAGCCCTGGGTGCCACCCAGCCACTTAGGGTCTACAGGGT 4144
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4145 GGGACTCCAGACCTAGAGCGTAAGTATGGATGTTGTGGCCCTGTGTCTTCCTAGTGTGACCCAGCCAGGAGCGG 4218
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4219 AAGCTTCAGGCGTTTGTAAAGTGAGGTCTGGCTCTGCCTCCTCCGTTTTTTTTTTTTTTCTGTTTCTGTTTCTG 4292
Query 1 -------------ATGGAGTCTTGCTCTGTCACCCAGGCTGGAGTGCAATGGCGCGATCTCCACTCACTGCAAC 61
|||||||||.||||||||.||||||||||||||||.||.|.|||||||..|||||||||||
Sbjct 4293 TTTTTTTTTTGAGATGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGTCACGATCTCAGCTCACTGCAAC 4366
Query 62 CTCTGCGTACCAGGTTCAAGCGATTCTCCTGTCTCAGCCTCCTGAGTAGCTGGGATTACAG----GTGCCCACC 131
|||.||.|.||||||.||||.||||||||||.||||||||||.||||||||||||.||||| ||| ||
Sbjct 4367 CTCCGCCTCCCAGGTACAAGAGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGTGTG----CC 4436
Query 132 ACCACAGCTGGCTAATTTTTGTATTTTTAGTAGAGACTGGGTTTTACCATATTGGCCAGACTGGTCTCGAACTC 205
||||...|||||||||||||||||||||||||||||..||||||..||||.||.||||||||||||||||||||
Sbjct 4437 ACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCGCCATGTTAGCCAGACTGGTCTCGAACTC 4510
Query 206 CTGACCTCAGGTGGTCCGCCTGCCTTGGCTTCCCAAAGTGCTGGGATTATAGGAGTGAGCCAC--TGCGCCTGG 277
|||||||||||||.|||.||..||..|||||||||||||.|||||||||||||.||||||||| ||| ||.|.
Sbjct 4511 CTGACCTCAGGTGATCCTCCCACCCCGGCTTCCCAAAGTTCTGGGATTATAGGCGTGAGCCACCATGC-CCGGT 4583
Query 278 CCATT--------------------------------------------------------------------- 282
|..||
Sbjct 4584 CTCTTCTCAGTCTTGAAGCCCATCCCTGGATTTCCACCAGGAGTTACTTTCCTCCTGACCTGTAAATTTGTTCT 4657
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4658 TTAACAATGGCTGCAGGTGGGAGCATATGGTGGTTTATAAAAACGCTGTCGGGCTTTGTTTCCTTCTTTAGCTG 4731
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4732 CCGTGTCTACTTCTGAAGTCTGGGAAGTGCCAAGCCACGCGGCCTCAAGGGAGCTGGCTGGTGTTTGAGCTGTG 4805
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4806 GCAGAAGCACCTGGGGCTCCAGGGAGCAGGCTGGGAACTGCAGGACCTTGCTCAGCCAGGAGCACTTCCCCCTC 4879
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4880 CTTGAGGCAGGAATACTGAGGTGCCTCCCCACAGATGGAGAAGGTGGAGAGGAGGATGGGCCTCAGGAGCATCT 4953
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4954 CAAGCCCCAGTAGCAGGAGAAAGAAAGAAAGAGATGCCTGGTTTTCACAGACTGGTTCCTGTGGCTGGGATGAC 5027
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5028 TGCATCCTTTTTTTTTTTTTTTTGAGACGGAGTTTTTGCCTTTGTCGCCCAGGCTGGAGTGCAATGGCGTGATC 5101
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5102 TCGGCTCACCGCAACCTCCGCCTCCCGGATTCAAGCAATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTAC 5175
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5176 AGGCACGCACCTCCACGTCCGGCTAATTTTGTATTTTTAGTGGAGACGGGGTTTCTCCATGTCGGTCAGGCTGG 5249
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5250 TCTCGAACTCCCGACCTCAGGTGATCTGCCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACC 5323
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5324 GCGCTTGGCCAGACTGCGTCCTTTTTAAGCGAACATTTTAGGGCCTGGGAGTTTGTCAAGTAAGGAAGTCTCAA 5397
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5398 GCCCAAAGAGCAGCGTCCTGACCATGGTGGTTTCATTACGAGCCCTTCTGCTGGCTCTCAGGCAGAAGCCCCAC 5471
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5472 AGCACCGGGACCATTCATGAGGTCACTGCCCAGCTCATGATGTCCGTGAGGCTGTCCTTTTGGCCAGTAGCCGT 5545
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5546 GTGCAGCTGTGTGGCACAGATGGCTTCGTTCATCCTGATCAAGGCCCCACCTCAGCCACAGCAGTCCCCCCAAC 5619
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5620 CTGTGTTGTCCACCCTATTATTCATGTACCTGCCAGGCCCTGCTAGATAGCACCCCGTGGCATTACATAACACT 5693
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5694 TCATGAGTGGCTGTGTCTTGTAATTTTGGGGACAGGTTTCTCTCTTTCCCTCTCTTTTTTTTGTCAAAAGCCCA 5767
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5768 GAGACTGACAACCAGCTGCAGTGTCTAAGTGTTCCTCACTGACAGGGTGGGGCCTCACCACCCCTGGAGGGAGC 5841
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5842 AGCGTTGGCAGGGAGACAGCCTGGCCCAGTGACCCTGGGCCCAAGCCAGCCCCTCCAGGGCTTTCAGGGAAGCG 5915
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5916 CCATCCATTTTCAAAGATGTCAAACGTCACTTCTTCCTGTAGGGCCCGAGTCCTGCCTCCTATCAGGGCCAGAT 5989
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5990 CATAGAAGGCTATTTTCTATTCTGGGGAACGATTATAACTTAAATGATTGTTTTAATAAAAATTCTAAGCTGGA 6063
Query 283 --- 282
Sbjct 6064 AAA 6066
