Nucleotide Global Alignment
Description
- Query:
- TRCN0000469746
- Subject:
- NR_164153.1
- Aligned Length:
- 4342
- Identities:
- 242
- Gaps:
- 4064
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGCAACCTGCTCGGGACCCCTCTCTGTGACTGTGAGCTGTTCTGTTCTTTTGCCTATTAAACTCCTGCTCCAAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTCACTCGATGTGTGTGTGCATGTCCTTGACCTCAATATCTGGTCGTGTGACCAAGAACCTCAGTATTCACCCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGACAACAAGGCTGCTTCATTTTGAGGGCTCGTCTGGGATTTGAAGGTGACTTCATCAGAATGGAAAGTCTCTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCTGACAAACAATTGCCTCCTCAAATACCAAGCTTTGCTGCTAAAGGGATCTGCAGTCCAGCTGAAAACCTGCC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTTGCCTGAGCCCAGCCACTTTCTCCCAGAGAAAACTGGAGAACCTAAACATGATTGTGAACAGAATGGCTTCC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GGTGGCCTGGGACTCCTTGGGGAAACAGAAAATGCACCACAAATCCCATTTTAGGAAAAATCTGTTTTCCTCGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AGCCCCTGGAATTAAAGGTGAATAAATACCTCTCAAAATCGTCTTTGTCTTCTGGCTATGCTTGCTTATTAGGC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CCTGGAAGCTGTATTCCTAGCTCTGTTCTGAAAGAACCTCACTCAGAGGCCAATAATCCAATTGGGACATTGGC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AAATGCAAAATCTTATAACTGCTGGATCTTCTTCTGTTTGTGTGGTTATATATGTGTTACTTGTGTAATGCCTA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TTAAAAAAAGGAGCTCTAATTAATTGGCCTAAGAAAAATAAGCGCTTAAATCAAACATTTTTAAGGGAAAAGTA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AAAGCTGTGGTACCTTTCAGTTCATGTGACTTTAATCTTTAAAAATAAAAAGAGTCTTAGGAATTATTGGTAAA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ATACAAATGTCTTCAAGGTATAAAAATGTGGTCTAAATTATGCAGGTCAAATACTAGTTTGCTAAATGTTTTAA 888
Query 1 ----------------------------ATGGAGTCTTGCTCTGTCACCCAGGCTGGAGTGCAATGGCGCGATC 46
|||||||||||||||||| .||||.||||||||||.|.|.||||||
Sbjct 889 GGTTGTAAACTGCTTTTTTTTTTTTGAGATGGAGTCTTGCTCTGTC-GCCAGACTGGAGTGCAGTAGTGCGATC 961
Query 47 TCCACTCACTGCAACCTCTGCGTACCAGGTTCAAGCGATTCTCCTGTCTCAGCCTCCTGAGTAGCTGGGATTAC 120
|...|.||||||||||||||..|.||.||||||||.||||||||||||||||||||||||||||||||||||||
Sbjct 962 TTGGCCCACTGCAACCTCTGACTCCCTGGTTCAAGTGATTCTCCTGTCTCAGCCTCCTGAGTAGCTGGGATTAC 1035
Query 121 AGGTGCCCACCACCACAGCTGGCTAATTTTTGTATTTTTAGTAGAGACTGGGTTTTACCATATTGGCCAGACTG 194
|||..|.|.||||||||.|...||||||||||.|||||||||||||||.||||||.|||||.||||||||..||
Sbjct 1036 AGGCACGCGCCACCACATCCATCTAATTTTTGCATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGATG 1109
Query 195 GTCTCGAACTCCTGACCTCAGGTGGTCCGCCTGCCTTGGCTTCCCAAAGTGCTGGGATTATAGG-AGTGAGCCA 267
|||||||.||||||||||| |||.||||||.||||||||.|||||||||||||||||||.||| || ||||||
Sbjct 1110 GTCTCGATCTCCTGACCTC--GTGATCCGCCCGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGCAG-GAGCCA 1180
Query 268 CTGCGCCTGGCCATT----------------------------------------------------------- 282
.||||.||||||||.
Sbjct 1181 TTGCGACTGGCCATAAAACTACTTCTTTATTTAGCCTTTAAAAACTATCAACGTGCCTGCTTCACAATTGGTAG 1254
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1255 CACCTGGGAACATACGGAAGCAACCAAGCCCCTAACTATGCTGAAAGGAGTCAAACATTATCTGCATCCAGCAC 1328
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1329 ATAATTAAAACAACCTAACAGGTTTTACATTAAAGTTAAAAATTACTAAAAGTTACCATTATAACATGTGATTG 1402
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1403 AAACTACTGAACATGGAATTACATGGAAAGTGTGTAAAAACAGTAAAAGATGTTTTTATTTAAAGATTATAAGA 1476
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1477 GGGCATGGAAATGTATATTTTGCTTAGAAATAAAGAATTGTCTTAAAGTAGAAGGTTTAAGCAAATTGTAAAAA 1550
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1551 AAAACTGTAAAAATCTTGCAAAAAAAAACACTGCGTGTAAACATATTAACTAAATGCAAAAGGGCATTATATGG 1624
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1625 TTTTTTTCTGTAAATTAATCACTGAAATAAAAGCACAGCAAGGTTTTCTTAAAATGCTAATCTACTCTTTAGCA 1698
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1699 AAACTTGTCAAGGGTTATAACAGGTATGTGAAAATCTCACTTCATGGTCAAACTGGTTAAAATTAAATAGGATT 1772
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1773 GTCTATAATGTTTCATTTAAAATTAAGTTTAACATTAATAGCAAACTAATGCAAGGGTAAAATTTAACTTTCTC 1846
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1847 TCTTAACACGGGATTTTCATGGAATAGAAAAGGCTAATGAATGGTTTTTGCTTTTTCAAATTTCTGGCTCAACA 1920
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1921 TTTTGGCAAAAACAAAAACTTTTGGTAATCTAAAATTCTATTTCATAATATCAAGTGTTTTAAATTTTAAATAT 1994
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1995 ACTTAACAGGCTTCCCAAAGTCAAACTTTAGTCTCAAGTCTGTCTTTCCTAACCCCTGGCTTTTGGGTGCTGCA 2068
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2069 GAGGACCCCTGAAGCATCTAGAAGAGAGGTAAACAGTATTATTTAACATGTTGAGGTACATAAAATTGCCAAAA 2142
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2143 TGATGTCTAATACTCTTCAGGTTATACTTTAGGGAATAATATTAACATGTGTTCCAAAACTGTATGGGATGTCT 2216
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2217 ATGGTTCTAGTGTCTGAATATGTGCTATTACAATTAAGGTTGTTATGCTGGGTTTTTGAAAAACACAAAAATAA 2290
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2291 CCAAATTTCTTTGTCAATTGTATTTCTGACTGTATCCAAACTGGACATTTTGTCATTTACAGACAATTGTTGTT 2364
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2365 TTGTTTTAATTCTCTTCAAAAGATGGTTCATAATCAAGCCATGGGACTTTAACAAGTTCTCTCCAATGCAGGTT 2438
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2439 TGTCATGACCAAAAAATGTATGGGACTCATAAAAGGCTAAAATGTTTATAAATATCAAAACAAAAGTTAATGGA 2512
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2513 ATGAACTGAACTAATAGAAAACTAAAGCAATATTCTTCACTTATTCTTAGAACACGGCTAATCCTTATTTTATT 2586
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2587 TTTTAGAGTCAAAAAAACTTGTCTTAAGCTAGCTACAGCCTTTGATAACTAAGCAAAGTGTACTACTATAGGCA 2660
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2661 AAGTTTGGAGCATGTTTATGTCTCTCTGCCTAATTCCTGTAGAATTTGGAAACTAGTTATAAATATTCTTAAAT 2734
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2735 TACAACAATATAGTTGTTTGAATCAGTGCAGCAAGAATCCATTTTCTCTTGCAACAAAACACAATTGGAAAAAC 2808
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2809 TGGTTGTTTTACCAAGGCTTTGACTAGAAGGGTATATTTCCCTTTAAGGAATCAAGCTTAACTTGCTGAGCCAA 2882
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2883 TAAAAGCCCCTGGGGAAAACTGGCCTCATATCTGTCTACACAGTCTCCATACAGGGTTCCTGACCTGCAGTGAG 2956
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2957 TAAAGAATGTCACTTTCTAACAGGCCTAGGAACCCCATGCTTCTGGAACCTCAAGAAGGAAAAAAATTTATCCA 3030
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3031 ACTCACAGGTATTTAAAAGTACAAACCTATGGCTGGGCTTGGCTTTAAAAAGTCCTATCTAAAATTCCTCATGG 3104
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3105 AACAAGGTTCCATCAAAGCCAATCTAAGAGGCTTATGTAAGGATGATTATTCTTGCTGTACTTTATGCAAATAA 3178
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3179 TTAGGCCAAGTATAGGACTGAAGTCTGTTTTGCAAACAACTCAGTCCTATCATAGATTATTTTTAACAAAAATG 3252
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3253 AGGACTAGAGAAAGAGAAATTATGTTTTAAGACTTATCATACATCTGTTATTAACCTGTAGTCCCATCAGTTGT 3326
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3327 TTTTAAGTTCTTGCCTACATTTTAAACTAACCCTGCTTACTCCTGTCAACCAACCAGGAATCTCTGGCTGCAGC 3400
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3401 TCAGAGAAAACAGAAAGGCATCGGTAATAGAAAAATCTGGAAACATGTTCTAGTTCTGGGCAATTATCCTACAA 3474
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3475 ATCCTGCCAGGTAAACTAGAACCCCAGGGTTTCTCCCTTTTTTGGGAAAGTAAGACCAAGGAAGCTAAACAAAG 3548
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3549 CCAAGCCCCATATACCCACTTACAGCAGCACAACCCATCTGAATGGCTCACAGGTATCAAACAAACTCTGTTGT 3622
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3623 CATGGTTACGGCCTATAGTGCCCCCATTAATAATAGTAATCTTAATACTCATATTTAGAACCTATATTCTAAAC 3696
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3697 CTCCTTGTGAAGTTTATCTCTTCTCGCTTAGAAACCATCAAGCTTCAGATGGTGCTGAAAATGGAGCCGAAAAT 3770
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3771 GAAACTGCCCTCCTACGAGGGACCCTTAAATCAACCCCAGGAGGAGCCCTAGCTGCTGTTCCCCACACAACGCC 3844
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3845 ACTCTCCAGCAGGAAGTAGCCAGAAGAAATCGTCACCCAGTTTCCCCTAGCAGCAGTTATGGATTTCATTCCTG 3918
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3919 AGGGGGGAAATATGTTATAGGAGGCAGAAAGAAATGATTTAGGCGCAGTAAGATTGAGGAGCTAAAAACAGACT 3992
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3993 TGGGTGGATGTCTGCAGCTGCAAGAAGATGTGTGGGAACAGACACAGAAACTCTCCCTCCCAGATAAGCAAGAC 4066
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4067 AAAGAAACACAGAATAAGAGTCCATCTATGTGGTCAGAGAATGGGATAAGAGCTGATTTAAAAAAACTCTGCTC 4140
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4141 TATATAGAAGGCACACCTGGTCCCAACCAAACCACTGGACCCTAGGAGGATAAGACCTCCTCTGCTCATGAGCC 4214
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4215 CCCTCCTCAGTAGCCCATTTATAAAAACCCTGACAATTTTACTACCACTTGGCAACCCGCTCGGGACCCCTCTC 4288
Query 283 -------------------------------------------------- 282
Sbjct 4289 TGTGATGGAGAGCTGTTCTTTTCTTTTGCCTATTAAACTCCTGCTCCAAA 4338
