Nucleotide Global Alignment
Description
- Query:
- TRCN0000469746
- Subject:
- XR_001741632.1
- Aligned Length:
- 3542
- Identities:
- 239
- Gaps:
- 3272
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCTGTTTTGCTGCACTCGATTCCCGCGGGCCCTGTTCTGTCTACTTTCCTTCCTTCGGCCCGGTTCCTCCCTCA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCACCCTCCAGACCTCCTTTACCATCGCCTTCTTTACCAGCCAGCTTTCTCGTCCATCCCCCGTTAATTTCTTA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ATTAGCGACTGTCCGCCGTGCGCCAGATGCTCTCTGTCGCTCGCGCAATTAATCCTTTTATCAGTCTGCTTAGT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TTACAGGAGAGGGAACCGCGGCTCCGCTGCGCGGCTTTGGACGAGTCACTCGTCCTTCTTGAGGGAGGTTTGTA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CGTATCAGAGACAAAGGGGCAAATCTCTGGCCCGAGAGGGCCTGCTGGGGGATTCTAAAACCGGAGCTGCGGGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTTCTGCACCAAGACTAGCCTAGGAGGAACGTTGTTTCAGCATCCGAGCTACTCTCTTTCTCCATCCCATCCTC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TCTCCCTCCATCCCATCCTCTCTCCCTGTTCCCTGTGCTGGGATGCCTTGGCCAAGGCAGAGAGCCAGCATCCG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GTCCCATCCATGGGGCCACGGGGCGCTTCCGTATTGTCTGGGTGGGGGCCACCGAGAACAGATACCTGTTTCCT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CCTCCTCAAGTTGCCATCCTCCGCCCTCTGCACCACACTGCCCTTACAAGTGGGCTGTGCCTGACTATGACCTG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CCCAGGGATACTGGGCAGCTGAGACACAGATTCCTTGGGCCTCCATGCCTTTATAAATAGGAATCATGCCAGCA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GCTGGGCCTGGGGAGCAAAGAGGATATCTGTCTTGACCCTAGCAGCATTATTTAGGCCACAACAGATCTACAAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CGTTTCAAAATAGCTTGGAGAGGACAGGTTTCCTCTTTCTTTGTAATCTTGTAGTTGCATCAAGCTACTGTCTA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CCTCTGTGGCTCTAGAAGCATGTAAATCAGTTATTCAATCTCTCCCCAGATTCATGGACTATCTGCCATGCCCC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AAACACCAGGCAGAGTGCTAAGGGGACACAAAGATGAATAAGATGTGACCCCTGCTCTCTAGGATCCTGTCGCA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TAGATGAAGAGATAGAACATATCCATAAAAAGATAACTAATGACCGACATTGCGTGCTGCCGACACGTGTTATG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GTCCTGCGGGCTACAGAAATTCAGAGGAGGAAGACAGATGACTGCAGTGTGGCAGCTGCTCCTCGGGCACTTAC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AGGAGCTTGTTAGGATGAGGACAGAAGACTTCATAGCACAGAGGGAACTGTGACACCAGCTTTATATCACACGA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TAGAAAATACCCAGTTCTGTGAGTTGACTGGGCATTCTGCATCACAAGGTGTGGCTGGGCACTGGAACAGCCGA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AGTCACCTGGGAGCTGACTGGGTTGGACTGTCCAGGATGGTTCACTCCTACGACAGTGGATGCTCAACTGGGGC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TGTCAACTGGAGCCCCCATAGGTAACATCTCCCAGCATGGCAGCTCTGTTCCAAGAGGGAGTGCCGCATGAGAA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TCAGGAAGCAGCTGCAAGGTTCCTCATGGTTTTGCCTTACAAGACACCCAGAGTTGTTTCAGCCTCATTCTGTT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TGTCAACAGGTCACTGTTTCAAGGAGGAGGGGAACTAGACTCCAGCTCTTGATGAAAGCAGTGATAAGGAATTT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GCAGTTCTAGTTGATCTACTGCAGCTTTCATGGTGTTTTTTCCATATACTGATTATATAATAGTATTTGTCACC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TTTTGCCAAGCGCCACGTATTACAATTAAGTGTCTCTTTATCTCACAGGCTAGATTTTCAACTTCTGGTGAGAG 1776
Query 1 --------------------------------ATGGAGTCTTGCTCTGTCACCCAGGCTGGAGTGCAATGGCGC 42
|..||||.|||||.|||||||||||||.||||||| ||
Sbjct 1777 ATTGCATTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTTTTGCTGTGTCACCCAGGCTAGAGTGCA-----GC 1845
Query 43 GATCTCCACTCACTGCAACCTCTGCGTACCAGGTTCAAGCGATTCTCCTGTCTCAGCCTCCTGAGTAGCTGGGA 116
||||||..||||||||||||||.|| |.||.|||||||||||||||.|||.||||||||||.|.|||.||||||
Sbjct 1846 GATCTCGGCTCACTGCAACCTCCGC-TCCCGGGTTCAAGCGATTCTTCTGCCTCAGCCTCCCGGGTAACTGGGA 1918
Query 117 TTACAGGTGCCCACCACCACAG-CTGGCTAATTTTTGTATTTTTAGTAGAGACTGGGTTTTACCATATTGGCCA 189
|||||||||||..|||| | |.||||||||||.|||||||||||||||||.||||||.|||||.|||||||
Sbjct 1919 TTACAGGTGCCTGCCAC----GCCCGGCTAATTTTCGTATTTTTAGTAGAGACAGGGTTTCACCATCTTGGCCA 1988
Query 190 GACTGGTCTCGAACTCCTGACCTCAGGTGGTCCGCCTGCCTTGGCTTCCCAAAGTGCTGGGATTATAGGAGTGA 263
|.||||||||||||||||||||||| ||.|||.||..|||||||.|||||||||||||||||||.|||.||||
Sbjct 1989 GGCTGGTCTCGAACTCCTGACCTCA--TGATCCACCCACCTTGGCCTCCCAAAGTGCTGGGATTACAGGTGTGA 2060
Query 264 GCCACTGCGCCTGGCC-----ATT-------------------------------------------------- 282
|||||||||||.|||| |||
Sbjct 2061 GCCACTGCGCCCGGCCGAGAGATTGCATTTTATTTAACCCAATTCTTTCAGTGACATAGCTATAATAACAATAA 2134
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2135 AGATGTATTAAGTTCCTCTACCATGTGTTTGATCCCATCTAATTGAACACATGATCTTATCTCATCCCTACCCT 2208
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2209 GATAGAATAGACGTCTCATTTTCCAGATTGGGAACTGAGGCACAGAAAGATTCAGCTTTGCCCAAAAACCACAT 2282
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2283 AATGGACAAGTGGCAGAGCCAGGATTTGAACCACTTAAGAGCCTGTGTTTTTATTCTCTCTCTTCTAGTGCCAT 2356
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2357 CTCACAGTCTTGGCACCATCTTAGTAGCTTCAGGCTGCTATAAAAAGTTACCATAGGCTGGATGGCTTAAGCAA 2430
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2431 CAGACATTTATTTCTCATGCTTATGGAGGCTGGGAAGTTCAGGATCCAGGTGGAGGCTGACCCCATGTCTTTCT 2504
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2505 GGGAGGTCCAGCTGCTCCTGGACCAGATAGTGCCAACACAATACTTCTCATTGTGTTATGATTGCCTACAGCAG 2578
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2579 GTGAAGGCCTGCTTCCTGTTTTCCAGATGGCCGTCTTCTCATTGTATCTTAACATGGTGGAAGGAGAATGAGAA 2652
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2653 AGCTCGCTTGTGTCTCTTTTTATAAGGGCACTAATCCAGACGCGGAGGGCTCACCTTTACAACAGCTAAACCTG 2726
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2727 ATCACCCCCCAGAGGCCCCATCTCCAAATACCATCACATTGGGGATTGTGCTTTGACATATGAATGTGGGAGGA 2800
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2801 CACGAGCATTCAGTCCATAACAGGCACCAAGGCACCAAGTCAGTCTGCACAAGTGTGTCGCTGGGCAGAAGAAC 2874
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2875 AAAAGAGAAGGAAGAAGAAAGAACACAGTACAGAAAGTGAGTGGCGGTACCACAAAGAGTCATCAGCAAGTGCT 2948
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2949 GATGGTGGCTCCGGCCAGCACATTCCAAGCATCCTTGGGTAGCCTGATAAATGGAGTGCAGAATGTTCGGTAGC 3022
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3023 TCTGCAAGGAGTGGGAGTATTTATTGGGTCTGAGTGCTTGATGCGAAACTTTCCTCCAAAGTTCCAATTTTCTA 3096
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3097 TCCGCCAAGATAAGTGATGGAGGTTTATGGTTCATGTTGTAGCACATCCACCCAGGCCAAGGACCTACAACTCT 3170
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3171 GAATTTCTGGCCTGCCTCCTTCCAGCTAGAAGTGAATCTAGATTTACATGCCATCAGGAACAAGCATCGTCTTC 3244
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3245 CTGTTCTGTGAGTTCCTAGTTGTAGTAGGTACTGCTTTCATCCTGAGAATATCAATCTACATGCACAAGGTCCC 3318
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3319 TCTCTGTGGAGGAGTAGGTACTTAAACCCAAGATAAGTGGAAACTTTATATCCAAGGAGACAGAAAATAAAATT 3392
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3393 TCAGTATGTTTTATATTAAACAACTTATTATACTTCTATCCTTTTATGAACATAAGGTCATCAGTAGGCCAAAA 3466
Query 283 ---------------------------------------------------------------- 282
Sbjct 3467 GTCTGAAAACAGTCTCAGTTCCTCAATGTGAATGCAAACCATTAGTGCAAAAAAAAAAAAAAAA 3530
