Nucleotide Global Alignment
Description
- Query:
- TRCN0000469746
- Subject:
- XR_002957767.1
- Aligned Length:
- 4869
- Identities:
- 243
- Gaps:
- 4591
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGTTAGCGCTTTCCTGGCCTAGAAGTGTAAATGTCTGTGTCTGTTGGTGAGACAGAGGACGTGGGCGCCCGCCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AAGAGAAGGCGCCTAGGCGCTGTCCGTAGTGCTGAAATGGTGCGTGGTGAGACCTGTCTCCCCAACACAAGCTA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GAAGACAACAAAATAGCAGCCAGGAAACGCTCTGATAAAGCTCTAGATAGCTGCCAGGCCGAGCTCAAGGGAGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGAACTAAGTTACATGATTCTGCTGCGGATGTATAAGCACCACTCCAATAATTTATTATCACGGTTGGAGACTT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGACTTGTCACTTTATGACTTGAAATATGGCTCCATGGTAAATGCCCATAAAGCTGATTTTTAAAATCTGGATA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TTACAGTTCTAATTCTCACTTAGTTTAAAAGGTAGAATAGGCTTCTTGTTTCATAGATCATTTGTGTGAATGTT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GATTTGTTATGTCATTGACATCATACACACATGCTTACATTTTGAAGGTTGCTAGCGTTTCCCATTAATGCTTC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGAATTGATGCCAAAGGAAAGCATTGATTATAAATTAGGTTCCTTGGTATTAGTTGGTGCATGACCCTGACCCT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TTTCAAGCTATATGAAAGGTAATGATGCTCTCAAAAGCCTGCAAAATGGCTTATTCAGGAAAGCATAATGGATT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AAAAATCCATTAGGTTCCACTTTCTTTGCTAGATGCTGAGATACAAAGATAAATGAGATTTGGTCTCTGCCCTC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GAGGAGATACGTGGCAAAATAATATGGTAAGTTCTACAAAGTTCTATACAAACACAGATTAATATGCTATTCAT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GTTTTATTAGCCATTGCCAAAGAAGGGATGAAGAACTGCAAAAAGATAAAACACAGAATACTTGTACTTCAGGT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CCTTGCCAATATCTACTGCCCAACTTTTACAAAAAAAATTGCTGAAAGGCATGAAATATATGAATGCCTTTCTA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AAGCACATGTGGATAATCTATACTTCTGGAGCATCTATGATTTATTTTCAGAACAATCCAAGTTATTAGAAAGG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TAAATATGTTGGTGACATTGTTTAGAAGTTCCTCAAGCAGAATTGCCTTTACTATGCTTTGACATTATGCTCTC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AGCTTATATACAGTAATTCTATGTGAAACAGTAGCCAGCTTACACAACCTGCTCTATATCTACTACAGAGCTGT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TACTAAAGTGTTGGTCAACATATAACTTACTATTTCTTATATAAAGATGCCCAAGAAATTTAGATTTCATAGAT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ATATCCCCAAAAGCATTTCTTTCAATACCAGTTTAATGAATTGAACTTTCATACCTCACTTAAATCAACCCAGG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GTAAAGTGGTATGTTCTGTTCTTACACACAATGAAAATCATGTAACTAATTAAAGTTAGCATTTATTTTAGCTA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CTAGGGATGCCAGAGTCAAATTAACAGCTGAAAATGAATAACTACATAAGACCTTAAGCCTTTTATATCTTTTC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TTTTTTTTTAATCACCTTAACTACTGCAATTTTGGTTTCTTAGGTAATGATAATATTATTTTCTTTTAATTATT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TGTTTTAATGTGTGACCTCATGTAAATGTCCTCATAAAATCAGAAGTGGAGTAAATAAATAAATAAAGTAAATT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TCTCTACTTTTTGATTATTGGGTGAGTGTATATGGTTGTTTTATAAATTTATTCTAAATAGGATACTAAAATAC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AGAAAATGTATCATCTAATTAGCTATGAAGATAAAAATCTAAACTATAATGAGGAAATATTAAAATGTCAAGAT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GACGAAGAAATTTTTCAGTTTATATAATTATAGATCAGCTTAATTTCAAACCACTTTGTTACCCTATTGCTATT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TTTATACTCTAAATAGTGTCCCTTATATGACTAAGACTTTTTGTTATCTCAGAGATTGGAAGTGTTAATTGTCC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 ACCTTGTTAGAAGACATGGTAACTATAGGAATTTAGAAAGCATGATAGCCCAACTGTAATGAATATATTCTAGA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 ATGAGGTTGTCACAAAGAAACTGAAAACAAGAATTTCCTCTAACAACTGAGCTCAGGATTCTTTTCAGAGGAAA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 ATTTAGCTTGCATAAATTCTTGCCATCTTGGCTCTAGTTGACTTCTTGCTCTCAACTTTTGCAAAGTGAGATCA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CCTTTACCTCTTCAACCTATGAGGCCAACATGTTACTTTCAATTTTTCAGGAAAATCTACGTCTTGTTTGGCTG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 AGGTTTGATTATTATTCCTTAACTAAAATATTTTAATGTAGCTGTGCTTTTTAATTTGAATATTGCTATTGATT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 CAAACATTGGGTAGCATATCTTTCAAATGTGAAATTTTAAAACATGTATTAAAGACAAACATAAATTAGTTTTG 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 GTATAACTATTTTTTAAGATTAATCCAATGCTTTTTTGGCTTTAGATGATGTTTGGTAATTAGCTATATTCAAA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 AGTCAACCTTTTTTTTTTTTCAAAAAATGAACTCCTATGTATATGAGTGTTATTTTTATCTACCCATGTCTTTT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TTGTCTACATATACAGTTTTAATCATTGTTTCGGGGGGAGGAATAAGAATGATTTTGAAATTTCACTAAGAAAG 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 ATATGCCCTCTTCCTAAAAATACATATATACAGATGTTTTGCTCACAGCTCAGGTATTCATGGATCTCTGGAAG 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 TTCATTTTTATAATCCCAAGGTAATCCAAAGAGCCTGCTAAAAAATTCTGCTGTAAATGCATGGTACATGATCT 2738
Query 1 ----------------------------------------------------------------------ATGG 4
||||
Sbjct 2739 CATTCCCTGTTTTACAACGAAGTATTGAATGGCTTAAACTCCTACTTTTTTTTTTTTTTTTTTTTTTGAGATGG 2812
Query 5 AGTCTTGCTCTGTCACCCAGGCTGGAGTGCAATGGCGCGATCTCCACTCACTGCAACCTCTGCGTACCAGGTTC 78
|||||..||||||.|||||||||||||||||.||||.|||||||..|||||||||||||||||.|.|..|||||
Sbjct 2813 AGTCTCCCTCTGTTACCCAGGCTGGAGTGCAGTGGCTCGATCTCTGCTCACTGCAACCTCTGCCTCCTGGGTTC 2886
Query 79 AAGCGATTCTCCTGTCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCCCA--CCACCACAGCTGGCTAA---- 146
||||||||||||||.||||||||.|||||||.||||||||||| .||.|| |||.||...||||||||
Sbjct 2887 AAGCGATTCTCCTGCCTCAGCCTTCTGAGTAACTGGGATTACA--AGCACATGCCATCAGGCCTGGCTAATTTT 2958
Query 147 -------TTTTTGTATTTTTAGTAGAGACTGGGTTTTACCATATTGGCCAGACTGGTCTCGAACTCCTGACCTC 213
|||||||||||||||||.|..|.||||||.|.|||.||||.|||.||||||||||||||||||||||
Sbjct 2959 TATTTTTTTTTTGTATTTTTAGTACAATCAGGGTTTCAGCATGTTGGTCAGGCTGGTCTCGAACTCCTGACCTC 3032
Query 214 AGGTGGTCCGCCTGCCTTGGCTTCCCAAAGTGCTGGGATTATAGGAGTGAGCCACTGCGCCTGGCC-------- 279
| ||.|||||||||||||||||||||||.|||||||||||.|||.||||||||..||||||||||
Sbjct 3033 A--TGATCCGCCTGCCTTGGCTTCCCAAAATGCTGGGATTACAGGCGTGAGCCAACGCGCCTGGCCAACTCCTA 3104
Query 280 ---ATT-------------------------------------------------------------------- 282
|||
Sbjct 3105 CATATTTTAAAGCCACCCCATTAGTTTTCTATTTTTTTCCCCTTGGAGATCTTCCTTTAGGTCATTTTTACCAT 3178
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3179 CTGATATCTCAAAACTAAGCCAAGGCTGAATGTGCTGAAATAGGATTAGAGAGTACAGTAATAGGATAATTAGA 3252
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3253 TTTGATTAGAAAATGACTGTGTGGGATTTTGTCAACAGTGAAGAAATGATCTAAGTATGTGGACTCCTAAGTGA 3326
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3327 ATTGAGCATGATGACACTTTAGTGTAGTTAATGATCTAATGCTGGTCTGGTTGATGAGTCCCATTGAAAATGAG 3400
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3401 ATGCTCTGTTTTCTGGTAAACTTTTCTGCAAAGAAAAATGTACTAAATGTTTCAGTTCAGAGTGTTCTATTTAA 3474
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3475 ATGAAATTTCATTTAATTGCTTTTAGTTTTACTGCCCATAAGCCTTCAGTTGTTTCATTTAAAGTGTACTTTAA 3548
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3549 GCCCTCCACTATATTCACTGTTGAATCTAATGAGTATGAGAGGGTACCTTGGGCACAATCTCCACGAATGTATG 3622
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3623 AGCCATAACTACAGTATAGTATATAGAGATTAGCTTAAGTTATTTTGCTCTGCTAAAGATAGAGAAACAAGAGC 3696
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3697 AGTTTTCTAACATAATGTATGCTTCTGTAATAGGACTCAGTTAAAAAATAATTGGCAAATAGGAATGTCAATGA 3770
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3771 AATGTGGAAATCAATTGTTTTATACATGATTTTCCCCAATACGTTAATGTTTTGACTACCAAGTAAAAGCAGTT 3844
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3845 GCACTCTAAGTCCACTAACACAGCTGAAGGTAGTAAGCTGTGGAGGAAAGTAGTCCTATATATAACACCCATTC 3918
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3919 ACTCCTCCTTTTTCCTCTTGGCTTAATTTCACCATACGATCTGTCTTGAAAATGCTTATTGCACAATTCTTCCT 3992
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3993 GATCTTTGTGCATTTGTCCTTGTTTTTGTAACTCAACCTTTGGTTTATTTATTCCATCATTCTTTCCTAACTCA 4066
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4067 AACAAATTTGTGAAGTTCTAAATGTATTGAAATATATGTCGTAACTTTTATTTTTAATTGTGCTAGCATTTTCT 4140
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4141 TAGCTTTGTAAATGTTTTTTGCAGTGCTATGGTTGTGATGTTATGTAAGTTTTACACTTTTTTCTCCAACATAA 4214
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4215 TTTTTTCCCGAAATATTGCCAGTTATTTTTGTTATTGAATAGACTTAATTTTCTTAGAGCAGTTTCAGGATTAC 4288
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4289 AGAAAAGTCAGAGAGTACAGAAAGTTCCCATATATCTCCCATCCCTTTTCTCACAGTTTCACTTGTTATTAACA 4362
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4363 TCTTACATTAGTGTGGTACATTTGTTAACAATTGATAAAACAATTTTGTTACATTATTATTAAGTACACAGTTT 4436
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4437 ACACTAGAGTTTATTCTTTTTGTTGGTCAGTTCTATGAGTTTTGAATAGTGTATAATGTCATATATTCACCATT 4510
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4511 ATATTGTCATGCAGAATAGTTTCACATTTCTGAATATCCCCTATTTATCCCTTCCTCTTCCCCTCACAAACCCC 4584
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4585 TGGAATCCATTGATCTGAAACTGTCTTGCAGTTTTCTCTTTTCCAGAATGTATGTATAGAGTCATACAGACTCT 4658
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4659 GTTGCCCTTTCAAACTGGCTTCTTTCATTTAACAACACGCATGTAAGCATCCTTCATGACTTTTCATGGCTTGA 4732
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4733 TAGCTCATTTATTTTTTATTGTTCAATAATATTTCATTGTATGGATATGCCACAGTTTATTTATCTATATATCT 4806
Query 283 ----------------------------------------------------------- 282
Sbjct 4807 GTTGAAAGATATCTCGGTTACTTCCAATTTTTGGCAATTATGAATAAAGATACTATAAA 4865
