Nucleotide Global Alignment

Description

Query:
TRCN0000469746
Subject:
XR_928392.3
Aligned Length:
3452
Identities:
120
Gaps:
3315

Alignment

Query    1  ATGGAGTCTTGCTCTGTCACCCAGGCTGGAGTGCAATGGCGCGATCTCCACTCACTGCAACCTCTGCGTACCAG  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  GTTCAAGCGATTCTCCTGTCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCCCACCACCACAGCTGGCTAATT  148
                                                                                   |||
Sbjct    1  -----------------------------------------------------------------------ATT  3

Query  149  TTTGTATTTTTAGTAGAGACTGGGTTTTACCATATTGGCCAGACTGGTCTCGAACTCCTGACCTCAGGTGGTCC  222
            |||||||||||||||||||..|||||||.||||.||||||||.|||||||||||||||||||||||||||.|||
Sbjct    4  TTTGTATTTTTAGTAGAGATGGGGTTTTGCCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCC  77

Query  223  GCCTGCCTTGGCTTCCCAAAGTGCTGGGATTATAGGAGTGAGCCACTGCGCCTGGCCATT--------------  282
            .|.|||||..||.|||||||||||.|||||||.|||.||||||||||||.||..||||||              
Sbjct   78  ACTTGCCTCAGCCTCCCAAAGTGCCGGGATTACAGGCGTGAGCCACTGCACCCAGCCATTAAAGGTGTTTTCTA  151

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct  152  CAGGGATCAAGCAAAACACAAGACATAACCTCAGTATATTCCCATAAATTCTCATGGAGGCTGAAATGGATACA  225

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct  226  AGGAATACCTAAAGAAACCTATTTATAGAAATTGCTAAGTGTTATATTCCCCTACATGCATAGAATAGGGCTTG  299

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct  300  GTTTCAGTGCAGGAAGAATTTATCTTAAATACTTAATGCAGAGAAAAGATAACATATGTTCCACTGCAGGTACA  373

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct  374  CTTCCTTCTAATGGGAAGATCAAAACTAGTGTTAACAACTACAGGAGACAAGGTACTCAGCAGTGAAATGACGT  447

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct  448  ACTCAGCCACTGTTTGGCAATTGGGTAGTTTTTCTCTAAAAACCTAATCAGCACAGTACAGAATAAGTTGTAGA  521

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct  522  AGAAAACTGAACTTGCACTGCTTCTCCATTCATTAAGACAGCTCACACTGAGCTCCACACAGCTGGAGCCCCAT  595

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct  596  GCTGAAAACCATCACATTGTACTTTTAGCAAACCTCTTATACACTGTCCTCAAAATGAAACCCTTTTATAGGAA  669

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct  670  GGGAGGGAGAAAAAAAGTCTAGAAAAAAAAGAAATGTCACATACTTTGATTTAAAGTTAGAAAAAAAGGCATAA  743

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct  744  GTTTGAGCCATTCCTTTAAAAATAACTATAAAAATTTCAGATACCAAATAAAGACAGTTTTGTCCAAAAATTCA  817

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct  818  AAACCACTTTAAAAAGAGGTATTTGTATTTTTAAATGAATCTGGACTTATTTAGCAAATGAATCCTTATGTTTT  891

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct  892  AACAAGCTTTAGTTTGCAAATAGAGGTCCTGGATTTGATCTTCCAATATTGGAAAACTAATTTCCATAGCCACT  965

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct  966  ATTTTTCCTACAAATCTTTTTAGTTTCAGCTCACATATCAATAAAATAAGAAAGGAGGAAAGTTGATTTGCAGC  1039

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 1040  AAGCTAGTAGTTTAAGTATTTGCTCCAGTAAGTGTTCAATATAAATTTAACAAATAAAGGCACCATGGCAGAGG  1113

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 1114  GACAAGAACTCTATAGGGTTGTTTCCCCTTAACTTGGCTCTTGCACAGAATCTCCTTTTCAGAGACCTTACCCA  1187

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 1188  TCCTCACGACATGAGGGTTCATCTTTGTGGAAATATGTCTAAATACCTTAACCTGTTGGCCTGACTTCTCTCCT  1261

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 1262  TCTAACATCTAACTAGGTATTTCTGCCTAAGTGTCCCATTGTACCTTGAAATTCATACATCAAAAACACTAGTT  1335

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 1336  CACCTTCTCACCTTACCTCACAAATTCTCTCTCATGTGTCTCTTCCTTTTCTGTTAATGGTACAATTAATTGTT  1409

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 1410  TCAGAAACACAGGCTCCAATCCTCAGATTCTTATTTGAGCTCCCCCTGTTCTTAACCCATTCAATAGTGCTGTT  1483

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 1484  AATTGCACTTCAAGTGTTTCAAATCTGCCATTTTCTTCTCACTCATTAGCTTAATATAGGCCCATCTCATATCA  1557

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 1558  TACCTGATTTCACTGGGTTCAGTTTCACAAACCTCCTCTTCAATGCCATTTTCTGAGCTGGTATTAGTGTCTCT  1631

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 1632  GAGCCTCATTTTTCTTGTTTTAACCCATTTTGCATTTGTTTTAATTCACTTTGCATCTTGCTGCCCAATTTCCT  1705

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 1706  ATCTAAAGGATTTTTTTTGGTTTGTCACTTAGCTGTTAAAAAATAATAAATGCCTTCTGTTGTTTCCAAGTCCA  1779

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 1780  AATTCCTTAGACTATTATTTGAGGCTATCCATAATCTGGCCCTCTTCGGTCCATACAACCTTATTTGTTACTAC  1853

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 1854  TTCCCTACATGAAAGACTCTTAACCAGGCCAATCTACTGAACCTTGCAGATGCCATCACCTTGCTCATGCCATC  1927

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 1928  ACCTTACCTGAATGCCCTTTCCAGCTATCCTCTACTGAAATTTTACTTCTCCATAGCAAATATTACTTTCCTTG  2001

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 2002  TTAGTTTGTTAGCTTATCAGCATTTATTCCAACTTTAATGACAATACATTTTCTTTTCATTGAATTATCTCTTC  2075

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 2076  TTCTTTCTGTACTGTGCTCTGGGATTGTTATCAAGACTTTTCCCCCTCCCCTATCCAGGAGGCCAGCAATGCAA  2149

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 2150  CCCTACCATGACCAACCAGACTCTTCCTTCTGGGAAGCAGAATTTTGAACAGAAGGCCAACAGACTGGAAATGC  2223

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 2224  CACGGAAGCCCTAGTCTGGCAGGAAAGAAGAGTCATTAGGCATCATCTGGCAACTTGGCTTGGAGAAGTCAGAT  2297

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 2298  CAGTCACCAAGAGTCTGGTGGGGCTGCAGCAATGGCTAGAAAGAACCAGTGACATGATTGCCAGATAGAGTGGT  2371

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 2372  CAGAGAAGACCTTTCTGAGGCCATGGTATTTAAGATGAGACTTGAAGAGCAACAAGAAGCTAGACACACAAAGC  2445

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 2446  AGATAATTTTTTAATGGCCATTTCTGGAGAGAAGTTTCCAAGGGATGAAGTTATTATACAGTTTCCAAATATTC  2519

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 2520  CTGAAGAGGTCTAAAGAAAATGTATTCTGATTCCACCTTTTACCTGTTTTCCTTTTTTTTTTTCTCTCTCTCTC  2593

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 2594  TTTTTGGAATTTGTTATTTGGATATAGGATACACTAGGCTGGTGCTCCAATTTTCTTATATTTTCTGTTTTCCT  2667

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 2668  TGAAGTTTTAGGGGACTTTCTGAACTTTATTTTTCAAAATTCAGTTGAGTCTTTATTGTTTTCCAAATATCAAC  2741

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 2742  ATTTCTTACCCAGACTAATGAACTAGCCTACTCACTCATCTTTCTGATCCTATTCCTCTATATTATCCACCCCA  2815

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 2816  ATCCCAAGTTAATTCTTGTATGGTCTTTTTGAAAGACTGCATGAGGTTTTTTGTTTTTATTTCTGCTTAAATTA  2889

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 2890  TTTGCTGATTTATTTGCACTTAGGATACAGGCCTAAATCCTTAGCTTTGCTGACATCATGAAAGATGTGGGCCC  2963

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 2964  TCCCTAGCACTCCAGTTTCATCTTACATCATGCCACTCTTTGGTACTTTATCCTTACTGTCCAGCTTCATTTCC  3037

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 3038  TAGAGTGTCCTGTGACCCTCTTGACTCAGAGCCTCTGCACGTGCTGTTCCCTGTGTTTGTCTCCTTTGTCCAGC  3111

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 3112  TCTACCAACTTCCTTTATCTCTCAGTGTTCAGGTGTCATCTCATCTCCAGCATGAATTAGATGTCTTATCTTGT  3185

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 3186  GCTTCTCATTGGGCTATACTGTAATGCTTAGCACATTAGTCAGTTCCCTCATTGCTATAAAGAAATACCTGAGG  3259

Query  283  ------------------------------------------------  282
                                                            
Sbjct 3260  CTGGGTAATTTATAAAGAAAGGAGGTTTAATTGGCTCACAGTTCTGCA  3307

GPP Web Portal Terms of Service

Effective Date: December 8, 2025
By using this site, you agree to our terms and conditions below.

Overview of Terms

The data made available on this website were generated for research purposes and are not intended for clinical or commercial uses. Commercial use (or other use for profit-making purposes) of the GPP Web Portal and its tools, is not permitted under these terms and may require a separate license agreement from Broad or its contributors. For more information, please contact partnering@broadinstitute.org.

The original data may be subject to rights claimed by third parties, including but not limited to, patent, copyright, other intellectual property rights, biodiversity-related access and benefit-sharing rights. It is the responsibility of users of Broad Institute services to ensure that their use of the data does not infringe any of the rights of such third parties.

Any questions or comments concerning these Terms of Use can be addressed to: legal@broadinstitute.org.

By accessing and viewing this GPP Web Portal, you agree to the following terms and conditions:

Attribution

You agree to acknowledge the Broad Institute (e.g., in publications, services or products) for any of your use of its online services, databases or software in accordance with good scientific practice. You agree to use the acknowledgment wording provided for the relevant tools as indicated on the FAQ for each tool.

Updating the Terms of Use

We reserve the right to update these Terms of Use at any time. When alterations are inevitable, we will attempt to give reasonable notice of any changes by placing a notice on our website, but you may wish to check each time you use the website. The date of the most recent revision will appear on this, the "GPP Web Portal Terms of Use" page. If you do not agree to these changes, please do not continue to use our online services. We will also make available an archived copy of the previous Terms of Use for comparison.

Indemnification and Disclaimer of Warranties

You are using this GPP Web Portal at your own risk, and you hereby agree to hold Broad and its contributors and their trustees, directors, officers, employees, and affiliated investigators harmless for any third party claims which may arise from your use of the GPP Web Portal, the tools available therein, or any portion thereof. Further, you agree to indemnify Broad, its contributors, and its and their trustees, directors, officers, employees, affiliated investigators, students, and affiliates for any loss, costs, claims, damages, or other liabilities arising from any unpermitted commercial or profit-making use you make of the GPP Web Portal. The GPP Web Portal is a research tool and is provided "as is". Broad does not represent that the GPP Web Portal is free of errors or bugs or suitable for any particular tasks.

ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE, NONINFRINGEMENT, OR THE ABSENCE OF LATENT OR OTHER DEFECTS ARE DISCLAIMED. IN NO EVENT SHALL BROAD OR ITS CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THE GPP WEB PORTAL, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

Governing Law

The terms and conditions herein shall be construed, governed, interpreted, and applied in accordance with the internal laws of the Commonwealth of Massachusetts, U.S.A. Furthermore, by accessing, downloading, or using the Database, You consent to the personal jurisdiction of, and venue in, the state and federal courts within Massachusetts with respect to Your download or use of the Database.