Nucleotide Global Alignment
Description
- Query:
- TRCN0000469746
- Subject:
- XR_928392.3
- Aligned Length:
- 3452
- Identities:
- 120
- Gaps:
- 3315
Alignment
Query 1 ATGGAGTCTTGCTCTGTCACCCAGGCTGGAGTGCAATGGCGCGATCTCCACTCACTGCAACCTCTGCGTACCAG 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GTTCAAGCGATTCTCCTGTCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCCCACCACCACAGCTGGCTAATT 148
|||
Sbjct 1 -----------------------------------------------------------------------ATT 3
Query 149 TTTGTATTTTTAGTAGAGACTGGGTTTTACCATATTGGCCAGACTGGTCTCGAACTCCTGACCTCAGGTGGTCC 222
|||||||||||||||||||..|||||||.||||.||||||||.|||||||||||||||||||||||||||.|||
Sbjct 4 TTTGTATTTTTAGTAGAGATGGGGTTTTGCCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCC 77
Query 223 GCCTGCCTTGGCTTCCCAAAGTGCTGGGATTATAGGAGTGAGCCACTGCGCCTGGCCATT-------------- 282
.|.|||||..||.|||||||||||.|||||||.|||.||||||||||||.||..||||||
Sbjct 78 ACTTGCCTCAGCCTCCCAAAGTGCCGGGATTACAGGCGTGAGCCACTGCACCCAGCCATTAAAGGTGTTTTCTA 151
Query 283 -------------------------------------------------------------------------- 282
Sbjct 152 CAGGGATCAAGCAAAACACAAGACATAACCTCAGTATATTCCCATAAATTCTCATGGAGGCTGAAATGGATACA 225
Query 283 -------------------------------------------------------------------------- 282
Sbjct 226 AGGAATACCTAAAGAAACCTATTTATAGAAATTGCTAAGTGTTATATTCCCCTACATGCATAGAATAGGGCTTG 299
Query 283 -------------------------------------------------------------------------- 282
Sbjct 300 GTTTCAGTGCAGGAAGAATTTATCTTAAATACTTAATGCAGAGAAAAGATAACATATGTTCCACTGCAGGTACA 373
Query 283 -------------------------------------------------------------------------- 282
Sbjct 374 CTTCCTTCTAATGGGAAGATCAAAACTAGTGTTAACAACTACAGGAGACAAGGTACTCAGCAGTGAAATGACGT 447
Query 283 -------------------------------------------------------------------------- 282
Sbjct 448 ACTCAGCCACTGTTTGGCAATTGGGTAGTTTTTCTCTAAAAACCTAATCAGCACAGTACAGAATAAGTTGTAGA 521
Query 283 -------------------------------------------------------------------------- 282
Sbjct 522 AGAAAACTGAACTTGCACTGCTTCTCCATTCATTAAGACAGCTCACACTGAGCTCCACACAGCTGGAGCCCCAT 595
Query 283 -------------------------------------------------------------------------- 282
Sbjct 596 GCTGAAAACCATCACATTGTACTTTTAGCAAACCTCTTATACACTGTCCTCAAAATGAAACCCTTTTATAGGAA 669
Query 283 -------------------------------------------------------------------------- 282
Sbjct 670 GGGAGGGAGAAAAAAAGTCTAGAAAAAAAAGAAATGTCACATACTTTGATTTAAAGTTAGAAAAAAAGGCATAA 743
Query 283 -------------------------------------------------------------------------- 282
Sbjct 744 GTTTGAGCCATTCCTTTAAAAATAACTATAAAAATTTCAGATACCAAATAAAGACAGTTTTGTCCAAAAATTCA 817
Query 283 -------------------------------------------------------------------------- 282
Sbjct 818 AAACCACTTTAAAAAGAGGTATTTGTATTTTTAAATGAATCTGGACTTATTTAGCAAATGAATCCTTATGTTTT 891
Query 283 -------------------------------------------------------------------------- 282
Sbjct 892 AACAAGCTTTAGTTTGCAAATAGAGGTCCTGGATTTGATCTTCCAATATTGGAAAACTAATTTCCATAGCCACT 965
Query 283 -------------------------------------------------------------------------- 282
Sbjct 966 ATTTTTCCTACAAATCTTTTTAGTTTCAGCTCACATATCAATAAAATAAGAAAGGAGGAAAGTTGATTTGCAGC 1039
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1040 AAGCTAGTAGTTTAAGTATTTGCTCCAGTAAGTGTTCAATATAAATTTAACAAATAAAGGCACCATGGCAGAGG 1113
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1114 GACAAGAACTCTATAGGGTTGTTTCCCCTTAACTTGGCTCTTGCACAGAATCTCCTTTTCAGAGACCTTACCCA 1187
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1188 TCCTCACGACATGAGGGTTCATCTTTGTGGAAATATGTCTAAATACCTTAACCTGTTGGCCTGACTTCTCTCCT 1261
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1262 TCTAACATCTAACTAGGTATTTCTGCCTAAGTGTCCCATTGTACCTTGAAATTCATACATCAAAAACACTAGTT 1335
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1336 CACCTTCTCACCTTACCTCACAAATTCTCTCTCATGTGTCTCTTCCTTTTCTGTTAATGGTACAATTAATTGTT 1409
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1410 TCAGAAACACAGGCTCCAATCCTCAGATTCTTATTTGAGCTCCCCCTGTTCTTAACCCATTCAATAGTGCTGTT 1483
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1484 AATTGCACTTCAAGTGTTTCAAATCTGCCATTTTCTTCTCACTCATTAGCTTAATATAGGCCCATCTCATATCA 1557
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1558 TACCTGATTTCACTGGGTTCAGTTTCACAAACCTCCTCTTCAATGCCATTTTCTGAGCTGGTATTAGTGTCTCT 1631
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1632 GAGCCTCATTTTTCTTGTTTTAACCCATTTTGCATTTGTTTTAATTCACTTTGCATCTTGCTGCCCAATTTCCT 1705
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1706 ATCTAAAGGATTTTTTTTGGTTTGTCACTTAGCTGTTAAAAAATAATAAATGCCTTCTGTTGTTTCCAAGTCCA 1779
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1780 AATTCCTTAGACTATTATTTGAGGCTATCCATAATCTGGCCCTCTTCGGTCCATACAACCTTATTTGTTACTAC 1853
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1854 TTCCCTACATGAAAGACTCTTAACCAGGCCAATCTACTGAACCTTGCAGATGCCATCACCTTGCTCATGCCATC 1927
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1928 ACCTTACCTGAATGCCCTTTCCAGCTATCCTCTACTGAAATTTTACTTCTCCATAGCAAATATTACTTTCCTTG 2001
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2002 TTAGTTTGTTAGCTTATCAGCATTTATTCCAACTTTAATGACAATACATTTTCTTTTCATTGAATTATCTCTTC 2075
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2076 TTCTTTCTGTACTGTGCTCTGGGATTGTTATCAAGACTTTTCCCCCTCCCCTATCCAGGAGGCCAGCAATGCAA 2149
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2150 CCCTACCATGACCAACCAGACTCTTCCTTCTGGGAAGCAGAATTTTGAACAGAAGGCCAACAGACTGGAAATGC 2223
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2224 CACGGAAGCCCTAGTCTGGCAGGAAAGAAGAGTCATTAGGCATCATCTGGCAACTTGGCTTGGAGAAGTCAGAT 2297
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2298 CAGTCACCAAGAGTCTGGTGGGGCTGCAGCAATGGCTAGAAAGAACCAGTGACATGATTGCCAGATAGAGTGGT 2371
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2372 CAGAGAAGACCTTTCTGAGGCCATGGTATTTAAGATGAGACTTGAAGAGCAACAAGAAGCTAGACACACAAAGC 2445
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2446 AGATAATTTTTTAATGGCCATTTCTGGAGAGAAGTTTCCAAGGGATGAAGTTATTATACAGTTTCCAAATATTC 2519
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2520 CTGAAGAGGTCTAAAGAAAATGTATTCTGATTCCACCTTTTACCTGTTTTCCTTTTTTTTTTTCTCTCTCTCTC 2593
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2594 TTTTTGGAATTTGTTATTTGGATATAGGATACACTAGGCTGGTGCTCCAATTTTCTTATATTTTCTGTTTTCCT 2667
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2668 TGAAGTTTTAGGGGACTTTCTGAACTTTATTTTTCAAAATTCAGTTGAGTCTTTATTGTTTTCCAAATATCAAC 2741
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2742 ATTTCTTACCCAGACTAATGAACTAGCCTACTCACTCATCTTTCTGATCCTATTCCTCTATATTATCCACCCCA 2815
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2816 ATCCCAAGTTAATTCTTGTATGGTCTTTTTGAAAGACTGCATGAGGTTTTTTGTTTTTATTTCTGCTTAAATTA 2889
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2890 TTTGCTGATTTATTTGCACTTAGGATACAGGCCTAAATCCTTAGCTTTGCTGACATCATGAAAGATGTGGGCCC 2963
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2964 TCCCTAGCACTCCAGTTTCATCTTACATCATGCCACTCTTTGGTACTTTATCCTTACTGTCCAGCTTCATTTCC 3037
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3038 TAGAGTGTCCTGTGACCCTCTTGACTCAGAGCCTCTGCACGTGCTGTTCCCTGTGTTTGTCTCCTTTGTCCAGC 3111
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3112 TCTACCAACTTCCTTTATCTCTCAGTGTTCAGGTGTCATCTCATCTCCAGCATGAATTAGATGTCTTATCTTGT 3185
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3186 GCTTCTCATTGGGCTATACTGTAATGCTTAGCACATTAGTCAGTTCCCTCATTGCTATAAAGAAATACCTGAGG 3259
Query 283 ------------------------------------------------ 282
Sbjct 3260 CTGGGTAATTTATAAAGAAAGGAGGTTTAATTGGCTCACAGTTCTGCA 3307
