Nucleotide Global Alignment
Description
- Query:
- TRCN0000469746
- Subject:
- XR_935264.2
- Aligned Length:
- 3038
- Identities:
- 249
- Gaps:
- 2756
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGTTGAGTCTGCGGAGCCGCGGGCAGTGGCAGTCAGGCCTCCCCGCTCTGTGCTACCTGCGGCCCGGCTCTCCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCGCGCCCCCACTCGCGCTGCGATGACGCGCTCACTGTTCAAGGGAAACTTTTGGAGTGCAGACATCCTCAGCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCATCGGCTATGACAACATTATCCAACATCTGAACAATGGCCGCAAGAACTGCAAAGAGTTTGAAGACTTTCTA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AAAGAAAGGGCAGCAATTGAAGAGAGGTATGGCAAAGATCTGCTCAACCTCTCTAGGAAGAAGCCGTGTGGACA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GTCTGAAATCAACACCCTGAAGCGGGCCCTTGAAGTCTTCAAGCAGCAAGTAGACAATGTGGCACAATGTCACA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TTCAGCTTGCACAGAGTTTAAGAGAAGAGGCCAGGAAGATGGAAGAATTCAGGGAAAAGCAAAAACTACAACGA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AAAAAGACAGAGCTCATAATGGATGCTATCCATAAACAAAAGAGCTTACAATTCAAGAAAACCATGGATGCAAA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GAAGAACTATGAGCAGAAATGCCGGGACAAAGATGAGGCAGAACAGGCCGTCAGCCGGAGTGCCAACCTGGTGA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ACCCGAAGCAACAAGAAAAGCTTTTTGTGAAACTGGCAACTTCAAAGACCGCAGTAGAGGACTCAGACAAAGCA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TACATGCTGCACATCGGCACCCTGGATAAGGTCCGAGAAGAGTGGCAGAGTGAGCACATCAAGGCCTGCGAGCT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ATTTTTCTGTAGGCATTTGAGGCTCAAGAATGTGAACGAATAAACTTCTTCCGGAATGCATTGTGGTTACATGT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GAATCAGCTGTCACAACAATGTGTCACCAGTGATGAAATGTACGAACAAGTCCGAAAGAGTTTAGAAATGTGCA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GCATTCAGAGGGACATTGAATACTTTGTGAATCAACGCAAAACTGGACAGATTCCACCAGCACCCATCATGTAT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GAGAATTTCTACTCCTCCCAGAAGAATGCAGTCCCAGCAGGAAAGGCTACAGGGCCTAACTTGGCAAGGAGAGG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ACCCCTCCCAATTCCTAAAAGCTCACCAGATGATCCCAATTACTCTTTGGTTGATGACTACAGTTTGCTCTATC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AGTAAAATCAATGAAACCAGAGCTTTTTCCGGCTAGTGCTTCTGTGATATGGAAAGGGCACCCAGAGCAGCAGG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ACCTATAGCCACGTTATGTCAGCAATGAAGACTTTGAAGTGAACCCTTGCTATAATTTTTTAGAGATTTAAAAT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TTATGGTAGACATTTAGGACAACATAAGCAAGTAGAGTTCTGCAGTTTTTTGAAGTTTACAAATTGCCCCATTC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TGAAGAATTATTCTTTCCCAGTTACTCAGGTTATGAATGAATTAGGTTTTCAACATGGGAAGCATGAAATCCAC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TTCTGGATTTGGAGCATCCACTTGAGGAGCAGAGGTGGCAGCAGAGGATTCTGAGCCACCAACTGCAGTAGTGG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CTCCTTTGGCTTTGGGCAGCCTGGCTGTGGAGTTTCCACGGCGACACACAGCCTCAGTGGTGCAAGATTTAAAA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TTACCTTCCTTTTTGGCTGGAAGACTTAGAAGCCGCCTGATCATACTTTCTCATTTTACAGATGAGGAAATAAA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GCCTACAAGTGTGAAATTAATTTCCTTACAGTTTTCCTAGCTGATGAGGGACAGAACCAGAACTAGAGCCTGAG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CCCAACCCACATCACTATTCTTCTAACCCTTCCTGAAGTTGTGATGCTCATGCTGAAATTTAAGATGCCAAATA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TTTTTGCCAGCACTTTTTCAGTTGGGAGAATCACCAGGGTTTAAATGTCAGATTTATTTTTATGTGGATCCCTG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TGTATGCTGAACTACAGAGCATGATGTTTAATCTAATTTAAGGAGCCACTGATTGTAAAACATGCCATTATTTT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 ATGTTGCACTAAGAAGGTGGGGTCGAGGAGTTGCCAATAAACTTGGGACAGACTATTGATGGCCAAGCCCATCT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GAATTTAAGATGCTAAAGTATGAAAAAAATACATCTTAGAATCAATGAAATACCATATTTTGATTCCATTCCTC 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 AAGATAATTTTAGAGTTATAAAACCAGTCCTCAATTTTGGGTCTTCACAGAGAATCTTTCCCTTGCTAGACCCC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 AGAATTTTAAATGCATCCGTCTTACACTTTCACAAATATTTGGGTTTTCCTTTTTCACTCACAAACAGCAGGGA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GGTCATGTACTTTTTGTACAACACCTGTGCACTATGAGAAAATGGTACCTTTTAGTTATTGACAAGTTAAAATA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GCACTCTCAGTTTTTCAGTATTACAGAGAGCAAATAGTTTCCTCTCCTGCTCTGTGCAGTAGCTTTTCCAGAAC 2368
Query 1 -------------------------------------------------------------ATGGAGTCTTGCT 13
|..||||||..||
Sbjct 2369 TATGGACAAATTGATCAGAAGAAGATTGATTATTTCCTCATCTTTTTTTCTTTTTTTTGAGACAGAGTCTCTCT 2442
Query 14 CTGTCACCCAGGCTGGAGTGCAATGGCGCGATCTCCACTCACTGCAACCTCTGCGTACCAGGTTCAAGCGATTC 87
|||||.|||||||||.||||||..|||..||||||..|||||||||||||||||.|.||.||||||||.|||||
Sbjct 2443 CTGTCCCCCAGGCTGAAGTGCAGCGGCATGATCTCAGCTCACTGCAACCTCTGCCTCCCGGGTTCAAGTGATTC 2516
Query 88 TCCTGTCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCCCACCACCACAGCTGGCTAA-TTTTTGTATTTTTA 160
|||||.||||||||||||||||||||||||||||||..||||||||||||.|||||||| ||||||||||||||
Sbjct 2517 TCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACCCACCACCACACCTGGCTAATTTTTTGTATTTTTA 2590
Query 161 GTAGAGACTGGGTTTTACCATATTGGCCAGACTGGTCTCGAACTCCTGACCTCAGGTGGTCCGCCTGCCTTGGC 234
|||.||||.||||||||||||.||||.|||.||||||||.||||||||||||||||||.|||.|||||||.|||
Sbjct 2591 GTAAAGACAGGGTTTTACCATGTTGGTCAGGCTGGTCTCAAACTCCTGACCTCAGGTGATCCACCTGCCTCGGC 2664
Query 235 TTCCCAAAGTGCTGGGATTATAGGAGTGAGCCACTGCGCCTGGCC-ATT------------------------- 282
.|||||||||||||||||||.|||.|||||||||||||||.|||| |||
Sbjct 2665 CTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGCGCCCGGCCTATTTCCCCACCTTTCGTGTAAGGTGCTA 2738
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2739 CTGAACATGACAGCTTCTTGTCATGACAGGAAACTTGCATCAGTTGGATATCCTTTTGAGAAACTGAATTTTGC 2812
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2813 AAAGGGCCAAATTTCCCCAAACTGAACGGGCTCAGGAAATGTTCCTTTACACTCAGAACATTCTATTTTAAGTA 2886
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2887 TATTATTTATTGTTGGCAGTTCCTCAGGGATTTCCCTTTTCTCTGTATTGGTCAGTGTAGTTGATGTAAAACCG 2960
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2961 TTTTGTGGATGGAAAATATTTTTATTTTATTGCTCTTTTAGTTTGGTAGGTTAAATAAAGGTTCTTGGTAATTT 3034
Query 283 ---- 282
Sbjct 3035 GGGA 3038
