Nucleotide Global Alignment

Description

• Query: TRCN0000469752
• Subject: XR_002956417.1
• Aligned Length: 1543
• Identities: 914
• Gaps: 628

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GATGATGCAACAGAAGAATCAGAAGCTTTTCAAAATTCCGTCTTCAAGAAGAAACACCCGTGGAGGAAGAAGAC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  ATTATACAAAACAAATTTAGAAACTGGGATCATGAGTGGAAAAACAAAGGCAAGAAGGGCTGCCATGTTTTTTA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GACGTTGCTCTGAAGACGCCAGCGGTAGCGCCAGTGGCAATGCTTTGTTATCAGAGGACGAAAATCCTGATGCG  222

Query    1  ---------------------------------------ATGCTTACACTGACTTTTCTTCTTGTAGGACTCCT  35
                                                   |||||||||||||||||||||||||||||||||||
Sbjct  223  AATGGGGTAACTCGATCATGGAAGATTATTCTAAGTACAATGCTTACACTGACTTTTCTTCTTGTAGGACTCCT  296

Query   36  AAATCATCAGTGGCTTAAAGAAACAGATGTTCCTCAGAAATCCAGACAATTATATGCCATAATTGCAGAATATG  109
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  AAATCATCAGTGGCTTAAAGAAACAGATGTTCCTCAGAAATCCAGACAATTATATGCCATAATTGCAGAATATG  370

Query  110  GTTCAAGGCTTTATAAATATCAGGCCAGACTTCGTATGCCTAAAGAGCAACTGGAACTTTTAAAGAAGGAAAGC  183
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  GTTCAAGGCTTTATAAATATCAGGCCAGACTTCGTATGCCTAAAGAGCAACTGGAACTTTTAAAGAAGGAAAGC  444

Query  184  CAGAATCTGGAAAACAATTTTCGTCAAATTCTATTTTTGGTCGAACAAATAGATGTCCTGAAGGCATTGCTAAG  257
            |||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||
Sbjct  445  CAGAATCTGGAAAACAATTTTCGTCAAATTCTATTTTTGATCGAACAAATAGATGTCCTGAAGGCATTGCTAAG  518

Query  258  AGATATGAAGGATGGTATGGACAATAATCACAACTGGAACACCCATGGAGACCCTGTGGAGGACCCGGACCACA  331
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  AGATATGAAGGATGGTATGGACAATAATCACAACTGGAACACCCATGGAGACCCTGTGGAGGACCCGGACCACA  592

Query  332  CAGAGGAAGTGTCAAACTTGGTCAATTATGTACTTAAAAAGTTGAGAGAAGACCAAGTCGAGATGGCTGATTAT  405
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  CAGAGGAAGTGTCAAACTTGGTCAATTATGTACTTAAAAAGTTGAGAGAAGACCAAGTCGAGATGGCTGATTAT  666

Query  406  GCCCTGAAGTCGGCCGGAGCCTCCATCATTGAAGCTGGGACCTCAGAAAGTTATAAAAATAATAAAGCAAAATT  479
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  GCCCTGAAGTCGGCCGGAGCCTCCATCATTGAAGCTGGGACCTCAGAAAGTTATAAAAATAATAAAGCAAAATT  740

Query  480  GTACTGGCATGGGATAGGTTTCCTAAATCATGAAATGCCTCCAGATATTATTCTTCAGCCGGATGTCTACCCTG  553
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  GTACTGGCATGGGATAGGTTTCCTAAATCATGAAATGCCTCCAGATATTATTCTTCAGCCGGATGTCTACCCTG  814

Query  554  GAAAGTGCTGGGCTTTTCCAGGTTCCCAGGGTCATACCCTAATCAAGCTTGCTACAAAGATCATACCAACTGCT  627
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  GAAAGTGCTGGGCTTTTCCAGGTTCCCAGGGTCATACCCTAATCAAGCTTGCTACAAAGATCATACCAACTGCT  888

Query  628  GTTACCATGGAGCACATCTCAGAGAAGGTGTCTCCGTCAGGAAACATCTCCAGTGCACCCAAGGAATTTTCTGT  701
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  GTTACCATGGAGCACATCTCAGAGAAGGTGTCTCCGTCAGGAAACATCTCCAGTGCACCCAAGGAATTTTCTGT  962

Query  702  CTAT----------------------------------------------------------------------  705
            ||||                                                                      
Sbjct  963  CTATGGTCTCAGCTCTGTTGCCCAGGTTGGAGAACAATCACAGCTCACTGCAACTTCAAACTCGTGGGATTGTT  1036

Query  706  --------------------------------------------------------------------------  705
                                                                                      
Sbjct 1037  TTTTAAATTTTTTAGTAGAGATAAGGGTCTTATTATGTTGCCCAGGCTGGTCTCAAACTCCAGGGCTCAGGATC  1110

Query  706  --------------------------------------GGCATCACAAAAAAATGTGAAGGAGAAGAAATTTTC  741
                                                  ||||||||||||||||||||||||||||||||||||
Sbjct 1111  CTCCCGCCTTGGCCTCCCACAGTGCTGGGATTACAGACGGCATCACAAAAAAATGTGAAGGAGAAGAAATTTTC  1184

Query  742  CTAGGTCAGTTTATATATAACAAAACAGGAACCACCGTTCAAACATTTGAACTCCAGCATGCAGTTTCTGAATA  815
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  CTAGGTCAGTTTATATATAACAAAACAGGAACCACCGTTCAAACATTTGAACTCCAGCATGCAGTTTCTGAATA  1258

Query  816  TTTATTATGTGTGAAACTTAATATCTTTAGCAACTGGGGACACCCGAAGTATACTTGTTTATATCGATTCAGGG  889
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  TTTATTATGTGTGAAACTTAATATCTTTAGCAACTGGGGACACCCGAAGTATACTTGTTTATATCGATTCAGGG  1332

Query  890  TCCATGGCACACCAGGCAAGCACATC------------------------------------------------  915
            ||||||||||||||||||||||||||                                                
Sbjct 1333  TCCATGGCACACCAGGCAAGCACATCTAGAAGAGTTGGTACAGAAGGCCATGCCACATGTCCAGAATATTCAAG  1406

Query  916  --------------------------------------------------------------------------  915
                                                                                      
Sbjct 1407  AATGCTTATTCTCTTAGATGATACCGCACCCATAGGAATTGAGAATTGGGAGTGGGAAGAAAACCTCAAAGTGG  1480

Query  916  ---------------------------------------------------------------  915
                                                                           
Sbjct 1481  TTCATACTTGCCTGTAAAAAGTAAATGCATTTTACTAATAAAAAAATATGGAAGTAAATTAAA  1543