Nucleotide Global Alignment

Description

Query:
TRCN0000469771
Subject:
XM_017317989.1
Aligned Length:
2323
Identities:
1886
Gaps:
209

Alignment

Query    1  ATG------GGG--------------------CTCCCAGCGCTCGAGTTCAGCGACTGCTGCCTCGATAGTCCG  48
            |||      |||                    ||||||| ||||                    |.|.|||||.
Sbjct    1  ATGCTAAGCGGGATGCTTGACACAGTTGGTCACTCCCAG-GCTC--------------------CAAAAGTCCT  53

Query   49  CACTTCCGAGAGACGCTCAAGTCGCACGAAGCAGA----GCTGGACAAGA---------CCAACAAATTCATCA  109
            .||||||.|            ||.|||..||.|||    |.|..||||||         .||.|.|.||||   
Sbjct   54  GACTTCCCA------------TCTCACACAGAAGAAATTGGTTTACAAGAACATTACTCTCACCTACTTCA---  112

Query  110  AGGAGCTCATCAAGGA--CGGGAA-----GTCACTCATAAGCGCGCTCAAGAATTTGTCTTCAGCGAAGCGGAA  176
              |||      |||.|  ||||.|     |.|     ||||   |..||.|.||||||||||.||.||||||||
Sbjct  113  --GAG------AAGAAAGCGGGTATTTTTGGC-----TAAG---GTACATGGATTTGTCTTCGGCAAAGCGGAA  170

Query  177  GTTTGCAGATTCCTTAAATGAATTTAAATTTCAGTGCATAGGAGATGCAGAAACAGATGATGAGATGTGTATAG  250
            ||||||||||||||||||||||||||||||||||||.|||||||||||.|||||||||||||||||||||||||
Sbjct  171  GTTTGCAGATTCCTTAAATGAATTTAAATTTCAGTGTATAGGAGATGCCGAAACAGATGATGAGATGTGTATAG  244

Query  251  CAAGGTCTTTGCAGGAGTTTGCCACTGTCCTCAGGAATCTTGAAGATGAACGGATACGGATGATTGAGAATGCC  324
            |.||.||||||||.||.|||||..||||.|||||||||||||||||.||.||||..||.|||||.|||||||||
Sbjct  245  CGAGATCTTTGCAAGAATTTGCTGCTGTTCTCAGGAATCTTGAAGACGAGCGGAGTCGAATGATCGAGAATGCC  318

Query  325  AGCGAGGTGCTCATCACTCCCTTGGAGAAGTTTCGAAAGGAACAGATCGGGGCTGCCAAGGAAGCCAAAAAGAA  398
            |||||||||||||||||.|||||||||||||||||||||||.|||||.|||||.||||.|||||||||||||||
Sbjct  319  AGCGAGGTGCTCATCACACCCTTGGAGAAGTTTCGAAAGGAGCAGATTGGGGCCGCCAGGGAAGCCAAAAAGAA  392

Query  399  GTATGACAAAGAGACAGAAAAGTATTGTGGCATCTTAGAAAAACACTTGAATTTGTCTTCCAAAAAGAAAGAAT  472
            |||||||||||||||.||.|||||.||.||||.||||||||||||.|||||||||||||||||||||||.||||
Sbjct  393  GTATGACAAAGAGACCGAGAAGTACTGCGGCACCTTAGAAAAACATTTGAATTTGTCTTCCAAAAAGAAGGAAT  466

Query  473  CTCAGCTTCAGGAGGCAGACAGCCAAGTGGACCTGGTCCGGCAGCATTTCTATGAAGTATCCCTGGAATATGTC  546
            |.|||||.|||||||||||||||||||||||||||||.|||||.||||||||.||||||||||||||.||||||
Sbjct  467  CCCAGCTACAGGAGGCAGACAGCCAAGTGGACCTGGTTCGGCAACATTTCTACGAAGTATCCCTGGAGTATGTC  540

Query  547  TTCAAGGTGCAGGAAGTCCAAGAGAGAAAGATGTTTGAGTTTGTGGAGCCTCTGCTGGCCTTCCTGCAAGGACT  620
            ||.||||||||||||||.||||||||||||||||||||||||||.|||||||||||||||||||||||||||||
Sbjct  541  TTTAAGGTGCAGGAAGTGCAAGAGAGAAAGATGTTTGAGTTTGTAGAGCCTCTGCTGGCCTTCCTGCAAGGACT  614

Query  621  CTTCACTTTCTATCACCATGGTTACGAACTGGCCAAGGATTTCGGGGACTTCAAGACACAGTTAACCATTAGCA  694
            ||||||||||||||||||||||||.||.||||||||||||||.||.|||||.|||||||||||.|||||.||||
Sbjct  615  CTTCACTTTCTATCACCATGGTTATGAGCTGGCCAAGGATTTTGGTGACTTTAAGACACAGTTGACCATCAGCA  688

Query  695  TACAGAACACAAGAAATCGCTTTGAAGGCACTAGATCAGAAGTGGAATCACTGATGAAAAAGATGAAGGAGAAT  768
            ||||.||.||||||||.|||||||||||.||.||.||.||.||||||||.||||||||.|||||||||||.||.
Sbjct  689  TACAAAATACAAGAAACCGCTTTGAAGGAACCAGGTCTGAGGTGGAATCGCTGATGAAGAAGATGAAGGAAAAC  762

Query  769  CCCCTTGAGCACAAGACCATCAGTCCCTACACCATGGAGGGATACCTCTACGTGCAGGAGAAACGTCACTTTGG  842
            |||||.|||||||||||||||||.||.|||||||||||.||.|||||.||||||||||||||.|||||||||||
Sbjct  763  CCCCTGGAGCACAAGACCATCAGCCCGTACACCATGGAAGGGTACCTGTACGTGCAGGAGAAGCGTCACTTTGG  836

Query  843  AACTTCTTGGGTGAAGCACTACTGTACATATCAACGGGATTCCAAACAAATCACCATGGTACCATTTGACCAAA  916
            ||||||.||||||||||||||||||||.||.|||||||||||||||||||||||||||||.|||||.|||||||
Sbjct  837  AACTTCCTGGGTGAAGCACTACTGTACCTACCAACGGGATTCCAAACAAATCACCATGGTTCCATTCGACCAAA  910

Query  917  AGTCAGGAGGAAAAGGGGGAGAAGATGAATCAGTTATCCTCAAATCCTGCACACGGCGGAAAACAGACTCCATT  990
            |||||||||||||.|||||||||||.||.||.||||.|||||||||||||||||||||.||.|||||||||||.
Sbjct  911  AGTCAGGAGGAAAGGGGGGAGAAGACGAGTCCGTTACCCTCAAATCCTGCACACGGCGAAAGACAGACTCCATC  984

Query  991  GAGAAGAGGTTTTGCTTTGATGTGGAAGCAGTAGACAGGCCAGGGGTTATCACCATGCAAGCTTTGTCGGAAGA  1064
            ||||||.|.||.||||||||.||||||||||||||||||||||||||||||||||||||.||.|||||||||||
Sbjct  985  GAGAAGCGATTCTGCTTTGACGTGGAAGCAGTAGACAGGCCAGGGGTTATCACCATGCAGGCGTTGTCGGAAGA  1058

Query 1065  GGACCGGAGGCTCTGGATGGAAGCCATGGATGGCCGGGAACCTGTCTACAACTCGAACAAAGACAGCCAGAGTG  1138
            ||||||.||||||||||||||||||||||||||||||||||||||.||||||||.||||.||||||||||||.|
Sbjct 1059  GGACCGTAGGCTCTGGATGGAAGCCATGGATGGCCGGGAACCTGTGTACAACTCCAACAGAGACAGCCAGAGCG  1132

Query 1139  AAGGGACTGCGCAGTTGGACAGCATTGGCTTCAGCATAATCAGGAAATGCATCCATGCTGTGGAAACCAGAGGG  1212
            |||||||.||.||.||||||||.||.||||||||||||||.|||||||||||||||||.|||||.|||||||||
Sbjct 1133  AAGGGACCGCACAATTGGACAGTATCGGCTTCAGCATAATAAGGAAATGCATCCATGCGGTGGAGACCAGAGGG  1206

Query 1213  ATCAACGAGCAAGGGCTGTATCGAATTGTGGGGGTCAACTCCAGAGTGCAGAAGTTGCTGAGTGTCCTGATGGA  1286
            |||||.|||||.|||||.||.|||||.|||||||||||||||||.|||||||||||||||||.|||||||||||
Sbjct 1207  ATCAATGAGCAGGGGCTCTACCGAATCGTGGGGGTCAACTCCAGGGTGCAGAAGTTGCTGAGCGTCCTGATGGA  1280

Query 1287  CCCCAAGACTGCTTCTGAGACAGAAACAGATATCTGTGCTGAATGGGAGATAAAGACCATCACTAGTGCTCTGA  1360
            ||||||..|.|||||||||||||||||.|||||||||||.||||||||||||||||||.||||.||||||||||
Sbjct 1281  CCCCAAAGCAGCTTCTGAGACAGAAACTGATATCTGTGCCGAATGGGAGATAAAGACCGTCACCAGTGCTCTGA  1354

Query 1361  AGACCTACCTAAGAATGCTTCCAGGACCACTCATGATGTACCAGTTTCAAAGAAGTTTCATCAAAGCAGCAAAA  1434
            ||||||||||.||||||||.||||||||.||||||||||||||||||||||||||||||||||||||||||||.
Sbjct 1355  AGACCTACCTGAGAATGCTCCCAGGACCCCTCATGATGTACCAGTTTCAAAGAAGTTTCATCAAAGCAGCAAAG  1428

Query 1435  CTGGAGAACCAGGAGTCTCGGGTCTCTGAAATCCACAGCCTTGTTCATCGGCTCCCAGAGAAAAATCGGCAGAT  1508
            |||||.|||||.|||.||||.||.|||||.||||||||.|||||.|||||||||||.|||||.|||||||||||
Sbjct 1429  CTGGAAAACCAAGAGACTCGAGTGTCTGAGATCCACAGTCTTGTCCATCGGCTCCCGGAGAAGAATCGGCAGAT  1502

Query 1509  GTTACAGCTGCTCATGAACCACTTGGCAAATGTTGCTAACAACCACAAGCAGAATTTGATGACGGTGGCAAACC  1582
            |||.||||||||||||||||||.||||.|||||||||||||||||||||||||||.|||||||.||||||||||
Sbjct 1503  GTTGCAGCTGCTCATGAACCACCTGGCCAATGTTGCTAACAACCACAAGCAGAATCTGATGACTGTGGCAAACC  1576

Query 1583  TTGGTGTGGTGTTTGGACCCACTCTGCTGAGGCCTCAGGAAGAAACAGTAGCAGCCATCATGGACATCAAATTT  1656
            |.||.|||||||||||||||||..||||..||||||||||||||||.||.||.|||||||||||||||||.|||
Sbjct 1577  TGGGCGTGGTGTTTGGACCCACCTTGCTTCGGCCTCAGGAAGAAACTGTGGCGGCCATCATGGACATCAAGTTT  1650

Query 1657  CAGAACATTGTCATTGAGATCCTAATAGAAAACCACGAAAAGATATTTAACACCGTGCCCGATATGCCTCTCAC  1730
            ||||||||||||||.||||||.||||.||.|||||.||.||||||||.|||||.|||||.|||.||||.|||||
Sbjct 1651  CAGAACATTGTCATCGAGATCTTAATCGAGAACCATGAGAAGATATTCAACACGGTGCCTGATGTGCCCCTCAC  1724

Query 1731  CAATGCCCAGCTGCACCTGTCTCGGAAGAAGAGCAGTGACTCCAAGCCCCCGTCCTGCAGCGAGAGGCCCCTGA  1804
            |||.||||||||.||||||||.||||||||.||||||||||||||||||||.|||||||||.||||||||||||
Sbjct 1725  CAACGCCCAGCTACACCTGTCCCGGAAGAAAAGCAGTGACTCCAAGCCCCCATCCTGCAGCAAGAGGCCCCTGA  1798

Query 1805  CGCTCTTCCACACCGTTCAGTCAACAGAGAAACAGGAACAAAGGAACAGCATCATCAACTCCAGTTTGGAATCT  1878
            ||||||||||..|.||.|..||.|||||.||||||||.||.||||||||||||||||||||||||||||||||.
Sbjct 1799  CGCTCTTCCATGCTGTGCCATCCACAGAAAAACAGGAGCAGAGGAACAGCATCATCAACTCCAGTTTGGAATCG  1872

Query 1879  GTCTCATCAAATCCAAACAGCATCCTTAATTCCAGCAGCAGCTTACAGCCCAACATGAACTCCAGTGACCCAGA  1952
            |||||.||.|.|.||||||||||||||||.||.|||||||||.|.||||||||..||||.|||||.|||.||.|
Sbjct 1873  GTCTCCTCGAGTGCAAACAGCATCCTTAACTCTAGCAGCAGCCTGCAGCCCAATCTGAATTCCAGCGACTCAAA  1946

Query 1953  CCTGGCTGTGGTCAAACCCACCCGGCCCAACTCACTCCCCCCGAATCCAAGCCCAACTTCACCCCTCTCGCCAT  2026
            |||||.||||||||||||.|..|||||||..|||||                                      
Sbjct 1947  CCTGGATGTGGTCAAACCTAGTCGGCCCAGTTCACT--------------------------------------  1982

Query 2027  CTTGGCCCATGTTCTCGGCGCCATCCAGCCCTATGCCCACCTCATCCACGTCCAGCGACTCATCCCCCGTCAGC  2100
                                                                                     |
Sbjct 1983  -------------------------------------------------------------------------C  1983

Query 2101  ACACCGTTCCGGAAGGCAAAAGCCTTGTATGCCTGCAAAGCTGAACATGACTCAGAACTTTCGTTCACAGCAGG  2174
            |||||.||||||||||||||.||.|||||.||||||.|||||||.||.|||||.||.||.||.||||||||.||
Sbjct 1984  ACACCATTCCGGAAGGCAAAGGCTTTGTACGCCTGCCAAGCTGAGCACGACTCGGAGCTCTCCTTCACAGCGGG  2057

Query 2175  CACGGTCTTCGATAATGTTCACCCATCTCAGGAGCCTGGCTGGTTGGAGGGGACTCTGAACGGAAAGACTGGCC  2248
            |||.|||||||||||||||||.||||||||||||||||||||||||||||||||||||||.|||||||||||||
Sbjct 2058  CACCGTCTTCGATAATGTTCATCCATCTCAGGAGCCTGGCTGGTTGGAGGGGACTCTGAATGGAAAGACTGGCC  2131

Query 2249  TCATCCCTGAGAATTACGTGGAGTTCCTC  2277
            |||||||.|||||.||||||||.||||||
Sbjct 2132  TCATCCCAGAGAACTACGTGGAATTCCTC  2160

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