Nucleotide Global Alignment

Description

Query:
TRCN0000469771
Subject:
XM_017317991.1
Aligned Length:
2407
Identities:
1095
Gaps:
1172

Alignment

Query    1  ATG-------GGGCTCCCAG-CGCT--------CGAGTTCAGCGACTGCTGC-----------CTCGATAG---  44
            |||       ||.||.|||| .|||        |.||...|||.|||||.||           |..|||||   
Sbjct    1  ATGTCTCACAGGTCTTCCAGAGGCTTCCAGAGGCCAGAGAAGCCACTGCAGCATGAGTTACTTCAAGATAGCTG  74

Query   45  ------TCC-------GCACTTC-CGAGAGAC----------GCTCAAGTCG----------CACGAAG-----  79
                  |||       ||.|||| |..|||||          ||| ||| ||          |||  ||     
Sbjct   75  GGAGCCTCCACTGGCTGCTCTTCTCTTGAGACCACAGGAAATGCT-AAG-CGGGATGCTTGACAC--AGTTGGT  144

Query   80  ------CAGAGCTGGACAAGACC--------------------AACAAATTCAT---CAAGGA------GCTCA  118
                  ||| |||..|.|||.||                    ||.|||||..|   ||||.|      .||||
Sbjct  145  CACTCCCAG-GCTCCAAAAGTCCTGACTTCCCATCTCACACAGAAGAAATTGGTTTACAAGAACATTACTCTCA  217

Query  119  ------TCAAGGACGGGAAGTCACTCATAAGCG---------CGCT------CAAGAATTTGTCTTCAGCGAAG  171
                  |||     |.||||       .|||||         .|||      ||.|.||||||||||.||.|||
Sbjct  218  CCTACTTCA-----GAGAAG-------AAAGCGGGTATTTTTGGCTAAGGTACATGGATTTGTCTTCGGCAAAG  279

Query  172  CGGAAGTTTGCAGATTCCTTAAATGAATTTAAATTTCAGTGCATAGGAGATGCAGAAACAGATGATGAGATGTG  245
            |||||||||||||||||||||||||||||||||||||||||.|||||||||||.||||||||||||||||||||
Sbjct  280  CGGAAGTTTGCAGATTCCTTAAATGAATTTAAATTTCAGTGTATAGGAGATGCCGAAACAGATGATGAGATGTG  353

Query  246  TATAGCAAGGTCTTTGCAGGAGTTTGCCACTGTCCTCAGGAATCTTGAAGATGAACGGATACGGATGATTGAGA  319
            ||||||.||.||||||||.||.|||||..||||.|||||||||||||||||.||.||||..||.|||||.||||
Sbjct  354  TATAGCGAGATCTTTGCAAGAATTTGCTGCTGTTCTCAGGAATCTTGAAGACGAGCGGAGTCGAATGATCGAGA  427

Query  320  ATGCCAGCGAGGTGCTCATCACTCCCTTGGAGAAGTTTCGAAAGGAACAGATCGGGGCTGCCAAGGAAGCCAAA  393
            ||||||||||||||||||||||.|||||||||||||||||||||||.|||||.|||||.||||.||||||||||
Sbjct  428  ATGCCAGCGAGGTGCTCATCACACCCTTGGAGAAGTTTCGAAAGGAGCAGATTGGGGCCGCCAGGGAAGCCAAA  501

Query  394  AAGAAGTATGACAAAGAGACAGAAAAGTATTGTGGCATCTTAGAAAAACACTTGAATTTGTCTTCCAAAAAGAA  467
            ||||||||||||||||||||.||.|||||.||.||||.||||||||||||.|||||||||||||||||||||||
Sbjct  502  AAGAAGTATGACAAAGAGACCGAGAAGTACTGCGGCACCTTAGAAAAACATTTGAATTTGTCTTCCAAAAAGAA  575

Query  468  AGAATCTCAGCTTCAGGAGGCAGACAGCCAAGTGGACCTGGTCCGGCAGCATTTCTATGAAGTATCCCTGGAAT  541
            .|||||.|||||.|||||||||||||||||||||||||||||.|||||.||||||||.||||||||||||||.|
Sbjct  576  GGAATCCCAGCTACAGGAGGCAGACAGCCAAGTGGACCTGGTTCGGCAACATTTCTACGAAGTATCCCTGGAGT  649

Query  542  ATGTCTTCAAGGTGCAGGAAGTCCAAGAGAGAAAGATGTTTGAGTTTGTGGAGCCTCTGCTGGCCTTCCTGCAA  615
            |||||||.||||||||||||||.||||||||||||||||||||||||||.||||||||||||||||||||||||
Sbjct  650  ATGTCTTTAAGGTGCAGGAAGTGCAAGAGAGAAAGATGTTTGAGTTTGTAGAGCCTCTGCTGGCCTTCCTGCAA  723

Query  616  GGACTCTTCACTTTCTATCACCATGGTTACGAACTGGCCAAGGATTTCGGGGACTTCAAGACACAGTTAACCAT  689
            |||||||||||||||||||||||||||||.||.||||||||||||||.||.|||||.|||||||||||.|||||
Sbjct  724  GGACTCTTCACTTTCTATCACCATGGTTATGAGCTGGCCAAGGATTTTGGTGACTTTAAGACACAGTTGACCAT  797

Query  690  TAGCATACAGAACACAAGAAATCGCTTTGAAGGCACTAGATCAGAAGTGGAATCACTGATGAAAAAGATGAAGG  763
            .||||||||.||.||||||||.|||||||||||.||.||.||.||.||||||||.||||||||.||||||||||
Sbjct  798  CAGCATACAAAATACAAGAAACCGCTTTGAAGGAACCAGGTCTGAGGTGGAATCGCTGATGAAGAAGATGAAGG  871

Query  764  AGAATCCCCTTGAGCACAAGACCATCAGTCCCTACACCATGGAGGGATACCTCTACGTGCAGGAGAAACGTCAC  837
            |.||.|||||.|||||||||||||||||.||.|||||||||||.||.|||||.||||||||||||||.||||||
Sbjct  872  AAAACCCCCTGGAGCACAAGACCATCAGCCCGTACACCATGGAAGGGTACCTGTACGTGCAGGAGAAGCGTCAC  945

Query  838  TTTGGAACTTCTTGGGTGAAGCACTACTGTACATATCAACGGGATTCCAAACAAATCACCATGGTACCATTTGA  911
            |||||||||||.||||||||||||||||||||.||.|||||||||||||||||||||||||||||.|||||.||
Sbjct  946  TTTGGAACTTCCTGGGTGAAGCACTACTGTACCTACCAACGGGATTCCAAACAAATCACCATGGTTCCATTCGA  1019

Query  912  CCAAAAGTCAGGAGGAAAAGGGGGAGAAGATGAATCAGTTATCCTCAAATCCTGCACACGGCGGAAAACAGACT  985
            ||||||||||||||||||.|||||||||||.||.||.||||.|||||||||||||||||||||.||.|||||||
Sbjct 1020  CCAAAAGTCAGGAGGAAAGGGGGGAGAAGACGAGTCCGTTACCCTCAAATCCTGCACACGGCGAAAGACAGACT  1093

Query  986  CCATTGAGAAGAGGTTTTGCTTTGATGTGGAAGCAGTAGACAGGCCAGGGGTTATCACCATGCAAGCTTTGTCG  1059
            ||||.||||||.|.||.||||||||.||||||||||||||||||||||||||||||||||||||.||.||||||
Sbjct 1094  CCATCGAGAAGCGATTCTGCTTTGACGTGGAAGCAGTAGACAGGCCAGGGGTTATCACCATGCAGGCGTTGTCG  1167

Query 1060  GAAGAGGACCGGAGGCTCTGGATGGAAGCCATGGATGGCCGGGAACCTGTCTACAACTCGAACAAAGACAGCCA  1133
            |||||||||||.||||||||||||||||||||||||||||||||||||||.||||||||.||||.|||||||||
Sbjct 1168  GAAGAGGACCGTAGGCTCTGGATGGAAGCCATGGATGGCCGGGAACCTGTGTACAACTCCAACAGAGACAGCCA  1241

Query 1134  GAGTGAAGGGACTGCGCAGTTGGACAGCATTGGCTTCAGCATAATCAGGAAATGCATCCATGCTGTGGAAACCA  1207
            |||.||||||||.|..|||||...|       |||||||||                ||.||            
Sbjct 1242  GAGCGAAGGGACAGGCCAGTTCCCC-------GCTTCAGCA----------------CCCTG------------  1280

Query 1208  GAGGGATCAACGAGCAAGGGCTGTATCGAATTGTGGGGGTCAACTCCAGAGTGCAGAAGTTGCTGAG----TGT  1277
            |||||  ||.|                    ||||       |||.||.|| |||.||||....|||    || 
Sbjct 1281  GAGGG--CACC--------------------TGTG-------ACTGCAAAG-GCAAAAGTATTAGAGGAGATG-  1323

Query 1278  CCTGATGGACCCCAAGACTGCTTCTGAGACAG-AAACAGATATCTGTGCTGAATGGGAGATAAAGACCATCACT  1350
            ||||.|||   .||||.|           ||| ||.|.||| |.|.|.||   |||            .|||  
Sbjct 1324  CCTGCTGG---GCAAGCC-----------CAGCAACCTGAT-TATTTCCT---TGG------------TTCA--  1365

Query 1351  AGTGCTCTGAAGACCTACCTAAGAATGCTTCCAGGACCACTCATGATGTACCAGTTTCAAAGAAGTTTCATCAA  1424
                                                                                      
Sbjct 1366  --------------------------------------------------------------------------  1365

Query 1425  AGCAGCAAAACTGGAGAACCAGGAGTCTCGGGTCTCTGAAATCCACAGCCTTGTTCATCGGCTCCCAGAGAAAA  1498
                                                                                      
Sbjct 1366  --------------------------------------------------------------------------  1365

Query 1499  ATCGGCAGATGTTACAGCTGCTCATGAACCACTTGGCAAATGTTGCTAACAACCACAAGCAGAATTTGATGACG  1572
                                                                                      
Sbjct 1366  --------------------------------------------------------------------------  1365

Query 1573  GTGGCAAACCTTGGTGTGGTGTTTGGACCCACTCTGCTGAGGCCTCAGGAAGAAACAGTAGCAGCCATCATGGA  1646
                                                                                      
Sbjct 1366  --------------------------------------------------------------------------  1365

Query 1647  CATCAAATTTCAGAACATTGTCATTGAGATCCTAATAGAAAACCACGAAAAGATATTTAACACCGTGCCCGATA  1720
                                                                                      
Sbjct 1366  --------------------------------------------------------------------------  1365

Query 1721  TGCCTCTCACCAATGCCCAGCTGCACCTGTCTCGGAAGAAGAGCAGTGACTCCAAGCCCCCGTCCTGCAGCGAG  1794
                                                                                      
Sbjct 1366  --------------------------------------------------------------------------  1365

Query 1795  AGGCCCCTGACGCTCTTCCACACCGTTCAGTCAACAGAGAAACAGGAACAAAGGAACAGCATCATCAACTCCAG  1868
                                                                                      
Sbjct 1366  --------------------------------------------------------------------------  1365

Query 1869  TTTGGAATCTGTCTCATCAAATCCAAACAGCATCCTTAATTCCAGCAGCAGCTTACAGCCCAACATGAACTCCA  1942
                                                                                      
Sbjct 1366  --------------------------------------------------------------------------  1365

Query 1943  GTGACCCAGACCTGGCTGTGGTCAAACCCACCCGGCCCAACTCACTCCCCCCGAATCCAAGCCCAACTTCACCC  2016
                                                                                      
Sbjct 1366  --------------------------------------------------------------------------  1365

Query 2017  CTCTCGCCATCTTGGCCCATGTTCTCGGCGCCATCCAGCCCTATGCCCACCTCATCCACGTCCAGCGACTCATC  2090
                                                                                      
Sbjct 1366  --------------------------------------------------------------------------  1365

Query 2091  CCCCGTCAGCACACCGTTCCGGAAGGCAAAAGCCTTGTATGCCTGCAAAGCTGAACATGACTCAGAACTTTCGT  2164
                                                                                      
Sbjct 1366  --------------------------------------------------------------------------  1365

Query 2165  TCACAGCAGGCACGGTCTTCGATAATGTTCACCCATCTCAGGAGCCTGGCTGGTTGGAGGGGACTCTGAACGGA  2238
                                                                                      
Sbjct 1366  --------------------------------------------------------------------------  1365

Query 2239  AAGACTGGCCTCATCCCTGAGAATTACGTGGAGTTCCTC  2277
                                                   
Sbjct 1366  ---------------------------------------  1365

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