Nucleotide Global Alignment
Description
- Query:
- TRCN0000469771
- Subject:
- XR_002956154.1
- Aligned Length:
- 3168
- Identities:
- 1128
- Gaps:
- 2029
Alignment
Query 1 ATGGGGCTCCCAGCGCTCGAGTTCAGCGACTGCTGCCTCGATAGTCCGCACTTCCGAGAGACGCTCAAGTCGCA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 CGAAGCAGAGCTGGACAAGACCAACAAATTCATCAAGGAGCTCATCAAGGACGGGAAGTCACTCATAAGCGCGC 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 TCAAGAATTTGTCTTCAGCGAAGCGGAAGTTTGCAGATTCCTTAAATGAATTTAAATTTCAGTGCATAGGAGAT 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 GCAGAAACAGATGATGAGATGTGTATAGCAAGGTCTTTGCAGGAGTTTGCCACTGTCCTCAGGAATCTTGAAGA 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 TGAACGGATACGGATGATTGAGAATGCCAGCGAGGTGCTCATCACTCCCTTGGAGAAGTTTCGAAAGGAACAGA 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 TCGGGGCTGCCAAGGAAGCCAAAAAGAAGTATGACAAAGAGACAGAAAAGTATTGTGGCATCTTAGAAAAACAC 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 TTGAATTTGTCTTCCAAAAAGAAAGAATCTCAGCTTCAGGAGGCAGACAGCCAAGTGGACCTGGTCCGGCAGCA 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 TTTCTATGAAGTATCCCTGGAATATGTCTTCAAGGTGCAGGAAGTCCAAGAGAGAAAGATGTTTGAGTTTGTGG 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 AGCCTCTGCTGGCCTTCCTGCAAGGACTCTTCACTTTCTATCACCATGGTTACGAACTGGCCAAGGATTTCGGG 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 GACTTCAAGACACAGTTAACCATTAGCATACAGAACACAAGAAATCGCTTTGAAGGCACTAGATCAGAAGTGGA 740
Sbjct 1 -------------------------------------------------------------------------- 0
Query 741 ATCACTGATGAAAAAGATGAAGGAGAATCCCCTTGAGCACAAGACCATCAGTCCCTACACCATGGAGGGATACC 814
Sbjct 1 -------------------------------------------------------------------------- 0
Query 815 TCTACGTGCAGGAGAAACGTCACTTTGGAACTTCTTGGGTGAAGCACTACTGTACATATCAACGGGATTCCAAA 888
Sbjct 1 -------------------------------------------------------------------------- 0
Query 889 CAAATCACCATGGTACCATTTGACCAAAAGTCAGGAGGAAAAGGGGGAGAAGATGAATCAGTTATCCTCAAATC 962
Sbjct 1 -------------------------------------------------------------------------- 0
Query 963 CTGCACACGGCGGAAAACAGACTCCATTGAGAAGAGGTTTTGCTTTGATGTGGAAGCAGTAGACAGGCCAGGGG 1036
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1037 TTATCACCATGCAAGCTTTGTCGGAAGAGGACCGGAGGCTCTGGATGGAAGCCATGGATGGCCGGGAACCTGTC 1110
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1111 TACAACTCGAACAAAGACAGCCAGAGTGAAGGGACTGCGCAGTTGGACAGCATTGGCTTCAGCATAATCAGGAA 1184
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ------------------------AGTGAAGGGACTGCGCAGTTGGACAGCATTGGCTTCAGCATAATCAGGAA 50
Query 1185 ATGCATCCATGCTGTGGAAACCAGAGGGATCAACGAGCAAGGGCTGTATCGAATTGTGGGGGTCAACTCCAGAG 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||
Sbjct 51 ATGCATCCATGCTGTGGAAACCAGAGGGATCAACGAGCAAGGGCTGTATCGAATTGTGGGTGTCAACTCCAGAG 124
Query 1259 TGCAGAAGTTGCTGAGTGTCCTGATGGACCCCAAGACTGCTTCTGAGACAGAAACAGATATCTGTGCTGAATGG 1332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 125 TGCAGAAGTTGCTGAGTGTCCTGATGGACCCCAAGACTGCTTCTGAGACAGAAACAGATATCTGTGCTGAATGG 198
Query 1333 GAGATAAAGACCATCACTAGTGCTCTGAAGACCTACCTAAGAATGCTTCCAGGACCACTCATGATGTACCAGTT 1406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 199 GAGATAAAGACCATCACTAGTGCTCTGAAGACCTACCTAAGAATGCTTCCAGGACCACTCATGATGTACCAGTT 272
Query 1407 TCAAAGAAGTTTCATCAAAGCAGCAAAACTGGAGAACCAGGAGTCTCGGGTCTCTGAAATCCACAGCCTTGTTC 1480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 273 TCAAAGAAGTTTCATCAAAGCAGCAAAACTGGAGAACCAGGAGTCTCGGGTCTCTGAAATCCACAGCCTTGTTC 346
Query 1481 ATCGGCTCCCAGAGAAAAATCGGCAGATGTTACAGCTGCTCATGAACCACTTGGCAAATGTTGCTAACAACCAC 1554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 347 ATCGGCTCCCAGAGAAAAATCGGCAGATGTTACAGCTGCTCATGAACCACTTGGCAAATGTTGCTAACAACCAC 420
Query 1555 AAGCAGAATTTGATGACGGTGGCAAACCTTGGTGTGGTGTTTGGACCCACTCTGCTGAGGCCTCAGGAAGAAAC 1628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 421 AAGCAGAATTTGATGACGGTGGCAAACCTTGGTGTGGTGTTTGGACCCACTCTGCTGAGGCCTCAGGAAGAAAC 494
Query 1629 AGTAGCAGCCATCATGGACATCAAATTTCAGAACATTGTCATTGAGATCCTAATAGAAAACCACGAAAAGATAT 1702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 495 AGTAGCAGCCATCATGGACATCAAATTTCAGAACATTGTCATTGAGATCCTAATAGAAAACCACGAAAAGATAT 568
Query 1703 TTAACACCGTGCCCGATATGCCTCTCACCAATGCCCAGCTGCACCTGTCTCGGAAGAAGAGCAGTGACTCCAAG 1776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 569 TTAACACCGTGCCCGATATGCCTCTCACCAATGCCCAGCTGCACCTGTCTCGGAAGAAGAGCAGTGACTCCAAG 642
Query 1777 CCCCCGTCCTGCAGCGAGAGGCCCCTGACGCTCTTCCACACCGTTCAGTCAACAGAGAAACAGGAACAAAGGAA 1850
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 643 CCCCCGTCCTGCAGCGAGAGGCCCCTGACGCTCTTCCACACCGTTCAGTCAACAGAGAAACAGGAACAAAGGAA 716
Query 1851 CAGCATCATCAACTCCAGTTTGGAATCTGTCTCATCAAATCCAAACAGCATCCTTAATTCCAGCAGCAGCTTAC 1924
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 717 CAGCATCATCAACTCCAGTTTGGAATCTGTCTCATCAAATCCAAACAGCATCCTTAATTCCAGCAGCAGCTTAC 790
Query 1925 AGCCCAACATGAACTCCAGTGACCCAGACCTGGCTGTGGTCAAACCCACCCGGCCCAACTCAC----------- 1987
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 791 AGCCCAACATGAACTCCAGTGACCCAGACCTGGCTGTGGTCAAACCCACCCGGCCCAACTCACTGGTTCATGCG 864
Query 1988 ---------------------------------------------------------------TCCCCCCGAAT 1998
|||||||||||
Sbjct 865 AGTTCAGCAAGCAGTTACCATGTCTACGGCATGCCAGGATACTGTTGGGAAGGTAGTATTCCGTCCCCCCGAAT 938
Query 1999 CCAAGCCCAACTTCACCCCTCTCGCCATCTTGGCCCATGTTCTCGGCGCCATCCAGCCCTATGCCCACCTCATC 2072
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 939 CCAAGCCCAACTTCACCCCTCTCGCCATCTTGGCCCATGTTCTCGGCGCCATCCAGCCCTATGCCCACCTCATC 1012
Query 2073 CACGTCCAGCGACTCATCCCCCGT-------------------------------------------------- 2096
||||||||||||||||||||||||
Sbjct 1013 CACGTCCAGCGACTCATCCCCCGTCAGGTCTGTTGCAGGGTTTGTTTGGTTTTCTGTTGCTGCCGTTGTTCTCT 1086
Query 2097 -------------------------------------------------------------------------- 2096
Sbjct 1087 CATTGGCTCGGTCCTCTCTTCATGCAGTGTTCAGCCTCCTCGTCAACTTTGTTCCCTGCCATCCAAACCTGCAC 1160
Query 2097 -----------------------------------------CAGCACACCGTTCCGGAAGGCAAAAGCCTTGTA 2129
|||||||||||||||||||||||||||||||||
Sbjct 1161 TTGCTTTTTGACAGGCCAGAAGAAGCGGTACATGAAGACTCCAGCACACCGTTCCGGAAGGCAAAAGCCTTGTA 1234
Query 2130 TGCCTGCAAAGCTGAACATGACTCAGAACTTTCGTTCACAGCAGGCACGGTCTTCGATA--------------- 2188
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1235 TGCCTGCAAAGCTGAACATGACTCAGAACTTTCGTTCACAGCAGGCACGGTCTTCGATAACGCAGAGTGTCCTT 1308
Query 2189 --------------ATGTTCAC--CCA-------------------------TCTCAGGAGCCTGG-------- 2213
||.||||| ||| ||||| |||||
Sbjct 1309 CAGCTTCCACAGCCATCTTCACTGCCACACCGAAGCTCCGGGCACCTCCACCTCTCA----CCTGGGCACTTCC 1378
Query 2214 -CTGG-----------------------------TTG-------------------------------GAGGGG 2226
|||| ||| |||.|.
Sbjct 1379 ACTGGCCGCCTGACACATCTTCTCACATCTGCTCTTGCTGCCATAACCCCCTCTTTACAGAGCAGCGAGAGTGA 1452
Query 2227 ACTCTG---AACGGAAA----------------GACTGGCCT--CAT--CCCTGAGAATTACGT----GG---- 2269
.||.|| |||||||| .|.|||||| ||| |.|||||||||||.| ||
Sbjct 1453 TCTTTGAAAAACGGAAATGGCATTAAAGCCCTTCAGTGGCCTCCCATTGCTCTGAGAATTACTTACAAGGCCCT 1526
Query 2270 ---------AGTTCCTC--------------------------------------------------------- 2277
|||||||.
Sbjct 1527 CCAGGGCCCAGTTCCTGCCCCTCTGACCTCACGCCCTCACTTGACATACTACAGCCTCATGCCTTCTTCATGTT 1600
Query 2278 -------------------------------------------------------------------------- 2277
Sbjct 1601 CTCAAGCAAGGTCGGCAAACTATGACCTGCCCGTCAAATCCAACCTGCCACCTGTCACCTAACAATTCTGTAAC 1674
Query 2278 -------------------------------------------------------------------------- 2277
Sbjct 1675 TGCTCCCACATACAACATGGTCGTCATCATAAATCCTATAGGTATTGTTGAGAGCAGGAGGAAAGTTTGGTTGA 1748
Query 2278 -------------------------------------------------------------------------- 2277
Sbjct 1749 GTGAGTGAGAGACCTTACCCAAGCCTTCCTGTGGTCTCTAGGAGTCATGGCAGAGTTCGCTGACACTGGTCTGC 1822
Query 2278 -------------------------------------------------------------------------- 2277
Sbjct 1823 TTTTAACCAGCCTTGCCAGTGACCTTTCAAATTCCCTGAGGAGCAAAAGGCCAAATTGAACCTGAAAGAAAACA 1896
Query 2278 -------------------------------------------------------------------------- 2277
Sbjct 1897 CCTCTCAGTGTTGACTGAGTTGCAGTAGAAAATGGACCTGACAAAACTTCACCCATCTCAGGAGCCTGGCTGGT 1970
Query 2278 ------------------------------------------------------------ 2277
Sbjct 1971 TGGAGGGGACTCTGAACGGAAAGACTGGCCTCATCCCTGAGAATTACGTGGAGTTCCTCT 2030
