Nucleotide Global Alignment
Description
- Query:
- TRCN0000469794
- Subject:
- XR_001752401.2
- Aligned Length:
- 6000
- Identities:
- 798
- Gaps:
- 5202
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CACTCTGAAAGCAGTCTTCACAGAAACTTTTCACAGAAGTCAAATAGTTAAAGCAAATTCTAGATACATGGTAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGACCAGGAGAAAATATGAATAACTTTCTTCTAAACAAGGAGCTCAGTGGATAAACCATACCTCTAGATTCCTT 148
Query 1 -----------------------ATGAGGAAGAGAAAGATCAGTGTGTGTCAACAAACTTGGGCCTTATTATGC 51
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GCTTCCATTTTCCCAGAAACAAGATGAGGAAGAGAAAGATCAGTGTGTGTCAACAAACTTGGGCCTTATTATGC 222
Query 52 AAGAACTTTCTTAAAAAATGGAGAATGAAAAGAGAGTCCTTAATGGAATGGCTGAATTCATTGCTCCTACTACT 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 AAGAACTTTCTTAAAAAATGGAGAATGAAAAGAGAGTCCTTAATGGAATGGCTGAATTCATTGCTCCTACTACT 296
Query 126 TTGTTTGTATATATATCCTCATAGTCATCAAGTAAATGATTTTTCTTCACTGCTTACCATGGACCTGGGACGGG 199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TTGTTTGTATATATATCCTCATAGTCATCAAGTAAATGATTTTTCTTCACTGCTTACCATGGACCTGGGACGGG 370
Query 200 TAGATACATTTAATGAATCCAGATTTTCTGTTGTATACACACCTGTCACCAACACGACCCAACAGATAATGAAT 273
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TAGATACATTTAATGAATCCAGATTTTCTGTTGTATACACACCTGTCACCAACACGACCCAACAGATAATGAAT 444
Query 274 AAAGTAGCCTCTACTCCCTTCCTGGCAGGTAAAGAGGTCTTGGGACTGCCAGATGAGGAAAGTATTAAAGAATT 347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 AAAGTAGCCTCTACTCCCTTCCTGGCAGGTAAAGAGGTCTTGGGACTGCCAGATGAGGAAAGTATTAAAGAATT 518
Query 348 CACAGCAAATTATCCTGAAGAAATAGTAAGAGTCACCTTTACTAATACATACTCATATCATTTGAAGTTCTTGC 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CACAGCAAATTATCCTGAAGAAATAGTAAGAGTCACCTTTACTAATACATACTCATATCATTTGAAGTTCTTGC 592
Query 422 TAGGACATGGAATGCCAGCAAAGAAGGAGCACAAGGACCATACAGCTCATTGTTATGAAACAAATGAAGATGTT 495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TAGGACATGGAATGCCAGCAAAGAAGGAGCACAAGGACCATACAGCTCATTGTTATGAAACAAATGAAGATGTT 666
Query 496 TACTGTGAAGTTTCAGTATTTTGGAAGGAAGGTTTTGTGGCTCTTCAAGCTGCCATTAATGCTGCTATTATAGA 569
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TACTGTGAAGTTTCAGTATTTTGGAAGGAAGGTTTTGTGGCTCTTCAAGCTGCCATTAATGCTGCTATTATAGA 740
Query 570 AATCACAACAAATCACTCAGTGATGGAGGAGCTGATGTCAGTTACTGGAAAAAATATGAAGATGCATTCCTTCA 643
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 AATCACAACAAATCACTCAGTGATGGAGGAGCTGATGTCAGTTACTGGAAAAAATATGAAGATGCATTCCTTCA 814
Query 644 TTGGTCAATCAGGAGTTATAACTGATTTGTACCTTTTTTCCTGCATTATTTCATTTTCCTCATTCATTTACTAT 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TTGGTCAATCAGGAGTTATAACTGATTTGTACCTTTTTTCCTGCATTATTTCATTTTCCTCATTCATTTACTAT 888
Query 718 GCATCTGTTAATGTCACAAGAGAGAGGAAAAGGATGAAGGCCTTGATGACAATGATGGGTCTTCGGGATTCAGC 791
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GCATCTGTTAATGTCACAAGAGAGAGGAAAAGGATGAAGGCCTTGATGACAATGATGGGTCTTCGGGATTCAGC 962
Query 792 GTTCTGG------------------------------------------------------------------- 798
|||||||
Sbjct 963 GTTCTGGCTCTCCTGGGGTTTGCTCTATGCTGGTTTCATCTTCATTATGGCCCTTTTCTTGGCACTTGTTATAA 1036
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1037 GATCTACCCAGTTTATCATTTTGTCTGGCTTCATGGTAGTCTTCAGCCTCTTTCTCCTGTATGGATTATCTTTG 1110
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1111 GTAGCTTTGGCTTTCTTAATGAGCATCTTGGTAAAGAAATCTTTCCTCACCGGCCTGGTCGTGTTCCTCCTCAC 1184
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1185 TGTCTTTTGGGGGTGTCTGGGGTTCACATCACTGTACAGACACCTTCCTGCATCCTTGGAGTGGATTTTAAGCT 1258
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1259 TGCTTAGTCCCTTTGCCTTCATGCTTGGAATGGCCCAGCTTTTACACTTGGACTATGATTTGAATTCTAATGCA 1332
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1333 TTTCCTCATCCATCGGACGGCTCAAATCTCATTGTAGCAACAAATTTCATGTTGGCATTTGACACTTGCCTCTA 1406
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1407 TCTGGCATTGGCGATTTACTTTGAAAAAATTTTGCCAAATGAATATGGACATCGACGTCCACCTTTGTTTTTCC 1480
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1481 TGAAGTCCTCATTTTGGTCTCAAACACAAAAGACTGATCACGTGGCCCTTGAAGATGAAATGGATGCCGATCCT 1554
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1555 TCATTTCATGACTCTTTTGAACAAGCGCCTCCAGAATTCCAAGGGAAAGAAGCCATCAGAATCAGAAATGTTAC 1628
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1629 AAAAGAATATAAAGGAAAGCCTGATAAAATAGAAGCCTTGAAAGATCTGGTATTTGACATTTACGAAGGCCAAA 1702
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1703 TCACTGCAATACTTGGTCACAGTGGAGCTGGAAAGTCAACACTGCTAAACATTCTTAGTGGGTTGTCTGTTCCC 1776
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1777 ACCAAAGGTTCAGTCACCATCTATAACAATAAGCTTTCAGAAATGGCTGACCTAGAAAATCTCAGCAAGCTGAC 1850
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1851 CGGAGTTTGTCCACAATCCAATGTGCAATTTGACTTCCTCACTGTAAGAGAAAACCTCAGACTCTTTGCTAAAA 1924
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1925 TAAAAGGGATTCTGCCACAAGAAGTGGATAAAGAGATACAAAGGGTTCTGCTGGAATTGGAAATGAAAAATATT 1998
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1999 CAGGATGTTCTTGCTCAAAACTTAAGTGGTGGACAGAAAAGAAAGCTAACCTTTGGGATTGCCATTTTAGGAGA 2072
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2073 TCCTCAGATTTTCCTGTTGGATGAACCAACTGCTGGATTGGATCCCTTTTCAAGACACCAAGTATGGAACCTTC 2146
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2147 TGAAAGAACGCAAAACAGACCGCGTGATCCTCTTCAGTACCCAGTTCATGGATGAGGCCGACATCCTGGCGGAC 2220
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2221 AGGAAAGTATTTCTCTCCCAAGGGAAGCTAAAGTGCGCGGGCTCTTCTTTGTTTCTAAAGAAGAAATGGGGGAT 2294
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2295 TGGATATCACTTAAGCTTGCAGTTAAATGAAATATGTGTTGAGGAAAACATAACATCACTTGTTAAACAGCACA 2368
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2369 TCCCTGATGCCAAATTATCAGCCAAAAGCGAAGGAAAACTTATTTATACATTACCCTTAGAAAGAACAAATAAA 2442
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2443 TTTCCAGAACTTTACAAGGATCTTGATAGCTATCCTGACCTAGGAATTGAGAATTATGGTGTTTCCATGACAAC 2516
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2517 TTTGAATGAAGTATTCCTGAAGCTAGAAGGAAAATCTACAATTAATGAATCGGACATTGCTATTTTGGGAGAAG 2590
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2591 TACAAGCGGAAAAAGCTGACGACACTGAAAGGCTTGTTGAGATGGAACAAGTCCTCTCTTCACTTAACAAGATG 2664
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2665 AGAAAGACAATAGGTGGTGTGGCTCTCTGGCGACAGCAAATCTGCGCAATTGCAAGGGTTCGCTTGTTAAAGTT 2738
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2739 AAAGCATGAAAGAAAAGCTCTTTTAGCACTGCTATTAATTCTAATGGCTGGATTTTGCCCTCTTCTTGTGGAGT 2812
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2813 ATACCATGGTGAAAATATATCAAAACAGTTACACCTGGGAACTTTCTCCTCATTTGTATTTCCTTGCTCCTGGA 2886
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2887 CAACAACCACATGACCCTCTCACTCAACTACTGATCATCAATAAAACAGGGGCAAGCATTGATGACTTTATACA 2960
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2961 GTCTGTGGAGCACCAGAACATAGCTTTAGAAGTGGATGCATTTGGAACTAGAAATGGCACAGATGACCCATCTT 3034
Query 799 -------------------------------------------------------------------------- 798
Sbjct 3035 ATAATGGAGCCATCACAGTGTGTTGTAATGAAAAGAATTACAGCTTTTCGTTAGCATGCAATGCCAAAAGATTG 3108
Query 799 -------------------------------------------------------------------------- 798
Sbjct 3109 AATTGCTTCCCAGTTCTTATGGACATTGTTAGTAATGGGCTACTTGGAATGGTTAAACCATCAGTACATATCCG 3182
Query 799 -------------------------------------------------------------------------- 798
Sbjct 3183 AACTGAAAGAAGTACATTTTTGGAGAATGGACAGGACAATCCAATCGGATTCCTGGCATATATCATGTTCTGGC 3256
Query 799 -------------------------------------------------------------------------- 798
Sbjct 3257 TGGTTTTAACATCGAGTTGCCCACCTTACATTGCCATGAGCAGCATCGATGATTATAAGAACAGAGCTCGGTCC 3330
Query 799 -------------------------------------------------------------------------- 798
Sbjct 3331 CAGCTACGGATTTCCGGACTCTCCCCTTCTGCTTACTGGTTTGGGCAGGCGCTGGTGGATGTTTCCCTGTACTT 3404
Query 799 -------------------------------------------------------------------------- 798
Sbjct 3405 CTTGGTCTTCGTTTTTATATATTTAATGAGCTACATTTCAAACTTCGAAGACATGCTACTTACAATAATTCATA 3478
Query 799 -------------------------------------------------------------------------- 798
Sbjct 3479 TTATTCAAATCCCATGTGCTGTTGGTTATTCCTTTTCCCTCATCTTCATGACATACGTGATTTCCTTCATCTTT 3552
Query 799 -------------------------------------------------------------------------- 798
Sbjct 3553 CGCAAGGGGAGAAAAAATAGTGGCATTTGGTCATTTTGTTTCTATGTTGTCACTGTATTCTCTGTGGCTGGATT 3626
Query 799 -------------------------------------------------------------------------- 798
Sbjct 3627 TGCGTTCAGTATCTTCGAAAGTGATATTCCATTTATCTTCACTTTTTTAATACCACCTGCCACAATGATTGGCT 3700
Query 799 -------------------------------------------------------------------------- 798
Sbjct 3701 GTTTGTTCTTATCTTCTCATAGTTCTAAAGAAGCACCCAAGATAAGCAAAGTCCTTTTTTCTGGCTGACTGATA 3774
Query 799 -------------------------------------------------------------------------- 798
Sbjct 3775 CCTATACCTATGCAAAAGGAAGGAAGTTACTGTACATGAGTGAAGAGGTATCTATGGGAAGGGGAAAGGAAGAG 3848
Query 799 -------------------------------------------------------------------------- 798
Sbjct 3849 AAGGGGCCCCACAAAGAGAAACGATGGGCACAGGAAGCTTCTCTTTTCTTCTCTCTTTTCTGAAGAACGAATGG 3922
Query 799 -------------------------------------------------------------------------- 798
Sbjct 3923 ATGTACAGCCATTTCTGGTATTCCTAATTCCTTTCCTTCATTTTATCATTTTTCTTTTTACTCTTCGATGTCTG 3996
Query 799 -------------------------------------------------------------------------- 798
Sbjct 3997 GAATGGAAGTTTGGAAAGAAATCAATGAGAAAGGATCCTTTCTTTAGAATTTCTCCAAGAAGTAGTGATGTGTG 4070
Query 799 -------------------------------------------------------------------------- 798
Sbjct 4071 TCAAAATCCAGAAGAACCAGAAGGAGAGGATGAAGATGTTCAGATGGAAAGAGTGAGAACAGCAAATGCCTTGA 4144
Query 799 -------------------------------------------------------------------------- 798
Sbjct 4145 ATTCTACTAATTTTGATGAGAAGCCAGTCATCATTGCCAGCTGTCTACGCAAGGAGTATGCAGGGAAGAGGAAA 4218
Query 799 -------------------------------------------------------------------------- 798
Sbjct 4219 GGCTGTTTTTCCAAGAGGAAGAATAAGATAGCCACGAGAAATGTCTCCTTCTGTGTTAGAAAAGGTGAAGTTTT 4292
Query 799 -------------------------------------------------------------------------- 798
Sbjct 4293 AGGATTATTAGGACACAATGGAGCTGGTAAAAGCACATCCATTAAGGTGATAACTGGAGACACAAAACCAACTG 4366
Query 799 -------------------------------------------------------------------------- 798
Sbjct 4367 CTGGACAAGTGCTACTGAAAGGGAGCGGTGGAGGGGATGCCCTGGAGTTCCTGGGGTACTGCCCTCAGGAGAAC 4440
Query 799 -------------------------------------------------------------------------- 798
Sbjct 4441 GCGCTGTGGCCCAACCTGACAGTGAGGCAGCACCTGGAGGTGTACGCCGCCGTGAAAGGGCTGAGGAAAGGGGA 4514
Query 799 -------------------------------------------------------------------------- 798
Sbjct 4515 TGCTGAGGTTGCCATCACACGGTTAGTGGATGCGCTCAAGCTGCAGGACCAGCTGAAGTCTCCCGTGAAGACCT 4588
Query 799 -------------------------------------------------------------------------- 798
Sbjct 4589 TGTCAGAGGGAATAAAGAGAAAGCTGTGCTTTGTCCTGAGCATACTGGGGAACCCGTCAGTGGTGCTTCTGGAT 4662
Query 799 -------------------------------------------------------------------------- 798
Sbjct 4663 GAGCCGTCGACCGGGATGGACCCCGAGGGGCAGCAGCAAATGTGGCAGGCCATCCGGGCCACCTTTAGAAACAC 4736
Query 799 -------------------------------------------------------------------------- 798
Sbjct 4737 GGAAAGGGGTGCCCTCCTAACCACCCACTACATGGCAGAGGCTGAGGCCGTGTGTGACCGAGTGGCCATCATGG 4810
Query 799 -------------------------------------------------------------------------- 798
Sbjct 4811 TATCTGGGAGGTTGAGATGTATCGGTTCCATCCAACACCTGAAAAGCAAATTTGGCAAAGATTACCTGCTGGAG 4884
Query 799 -------------------------------------------------------------------------- 798
Sbjct 4885 ATGAAGGTGAAGAACCTGGCACAAGTGGAGCCCCTCCATGCAGAGATCCTGAGGCTTTTCCCCCAGGCTGCTCG 4958
Query 799 -------------------------------------------------------------------------- 798
Sbjct 4959 GCAGGAAAGGTACTCCTCTCTGATGGTTTATAAGTTGCCAGTGGAAGATGTGCAACCTTTAGCCCAAGCTTTCT 5032
Query 799 -------------------------------------------------------------------------- 798
Sbjct 5033 TCAAATTAGAGAAGGTTAAACAGAGCTTTGACCTAGAGGAGTACAGCCTCTCACAGTCTACCCTGGAGCAGGTT 5106
Query 799 -------------------------------------------------------------------------- 798
Sbjct 5107 TTCCTGGAGCTCTCCAAGGAGCAGGAGCTGGGTGATTTTGAGGAGGATTTTGATCCCTCAGTGAAGTGGAAGCT 5180
Query 799 -------------------------------------------------------------------------- 798
Sbjct 5181 CCTCCCCCAGGAAGAGCCTTAAAACCCCAAATTCTGTGTTCCTGTTTAAACCCGTGGTTTTTTTTAAATACATT 5254
Query 799 -------------------------------------------------------------------------- 798
Sbjct 5255 TATTTTTATAGCAGCAATGTTCTATTTTTAGAAACTATATTATAAGTACAGAAATGGTTCTCCGTGTGGTGGGA 5328
Query 799 -------------------------------------------------------------------------- 798
Sbjct 5329 GGAGGAGGTTCGGGTGCTGGGTAAGTGCCATGTCAGTGTGGACAGAGGCATTTGACTAAGCCAACCTCCTCTCA 5402
Query 799 -------------------------------------------------------------------------- 798
Sbjct 5403 CAGCCTCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTGTATAATACTGAATAAATAAATTTACTTTTAC 5476
Query 799 -------------------------------------------------------------------------- 798
Sbjct 5477 ATGATCGTATAAGTTTCTAGATAAGATAAACAAATTTTGTTTAAATTTTTTTAATAAAAATCTTAAAACACTTT 5550
Query 799 -------------------------------------------------------------------------- 798
Sbjct 5551 TTTTCTAACCTAGACTGAGAAATTCATGTTTACTTTTCTAGGTGTATGATACTTTGTAAAGTTGATACTTTCCT 5624
Query 799 -------------------------------------------------------------------------- 798
Sbjct 5625 AAGAATTTAACATGTCATATTTTTGAAATAGATTTAAGTGTGCTTCTTATTGCTAAAAATACTAAATGTCATGG 5698
Query 799 -------------------------------------------------------------------------- 798
Sbjct 5699 GTCATAGTATCTGATATCAATATCGTTGATAACATATCCACAGGTAACACCATGATGTAGGCATAAATGGAAAA 5772
Query 799 -------------------------------------------------------------------------- 798
Sbjct 5773 CAAAAACCCTACTATTTCAAATATATTGTACTTTTTTATTTCTGTAAGCCAACTGTGTGCCATTTTCACTGGAC 5846
Query 799 -------------------------------------------------------------------------- 798
Sbjct 5847 TTTTAAATCTAGACTTTAGTGATGTCTACATTGTAAATGATCTTTTGTGGATATTTGTCACTTGGTTTCAGAAA 5920
Query 799 -------------------------------------------------------------------------- 798
Sbjct 5921 GTTCACAAATGTAGCAACAGCTCACATGACTGAGTAGGTAGAAAATGTGAAATAAATCTCATATATATAGTTTT 5994
Query 799 ------ 798
Sbjct 5995 GAAATA 6000
