Nucleotide Global Alignment

Description

Query:
TRCN0000469808
Subject:
NR_122118.1
Aligned Length:
4376
Identities:
1430
Gaps:
2819

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AGTCCGCGCAGTAACAAGGAGTGCGCGCTGCGACACCTCCCAGTTCCCCCGGCCCCGCCGCCATTTCGTCGCCG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGCCTAACGGTTCGGCCAATCCCGACCCATATTGAAAAGAGCCAGTGCTCCACCAATCGGAGGCCGCTGCCTCC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GACCTCACCTCGGGCCGGCCCAATCCAGGCCGCGGCCCCTCCGCCCCGAGCCCGCCCCCGCGGCGTCCTTTCTC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CTCCCTCTTTGTGCGTCTGGCGCCGCCGCCGCCCGCCGCGTGAGAGGACGGGCTCCCCGCGCTCTTCAGCCGCG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TAGTCGGGTCCCCTCCCCCCCACCTCCAGCTCCCGGAAGGTTCGTGAAGGAGAAGTCGCCGCGGAGGACGAGGA  370

Query    1  ----------------------------ATGGCGACCGGAGCGAACGCCACGCCGTTGGACTTCCCAAGTAAGA  46
                                        |||||||||||||||||||||||||||.||||||||||||||||||
Sbjct  371  ACCGCTGCTGCCGGTCCCCTGGGGCGCCATGGCGACCGGAGCGAACGCCACGCCGCTGGACTTCCCAAGTAAGA  444

Query   47  AGCGGAAGAGGAGCCGCTGGAACCAAGACACAATGGAACAGAAGACAGTGATTCCAGGAATGCCTACAGTTATT  120
            ||.|||||||||||||.||||||||||||||||||||.||||||||||||||||||||.||||||||||||||.
Sbjct  445  AGAGGAAGAGGAGCCGATGGAACCAAGACACAATGGAGCAGAAGACAGTGATTCCAGGCATGCCTACAGTTATA  518

Query  121  CCCCCTGGACTTACTCGAGAACAAGAAAGAGCTTATATAGTGCAACTGCAGATAGAAGACCTGACTCGTAAACT  194
            |||||||||||.|||||.|||||.|||||||||||.||                                    
Sbjct  519  CCCCCTGGACTGACTCGGGAACAGGAAAGAGCTTACAT------------------------------------  556

Query  195  GCGCACAGGAGACCTGGGCATCCCCCCTAACCCTGAGGACAGGTCCCCTTCCCCTGAGCCCATCTACAATAGCG  268
                                                    |||||||||||||||||.||.||||||||.||||
Sbjct  557  ----------------------------------------AGGTCCCCTTCCCCTGAACCAATCTACAACAGCG  590

Query  269  AGGGGAAGCGGCTTAACACCCGAGAGTTCCGCACCCGCAAAAAGCTGGAAGAGGAGCGGCACAACCTCATCACA  342
            |||||||||||||||||||.|||||||||||.||||||||||||||.||||||||||||||||.|||.||.|||
Sbjct  591  AGGGGAAGCGGCTTAACACTCGAGAGTTCCGTACCCGCAAAAAGCTTGAAGAGGAGCGGCACACCCTTATTACA  664

Query  343  GAGATGGTTGCACTCAATCCGGATTTCAAGCCACCTGCAGATTACAAACCTCCAGCAACACGTGTGAGTGATAA  416
            |||||||||||.|||||.||.||.||.||.|||||||||||||||||.||||||||||||||||||||.|||||
Sbjct  665  GAGATGGTTGCTCTCAACCCAGACTTTAAACCACCTGCAGATTACAAGCCTCCAGCAACACGTGTGAGCGATAA  738

Query  417  AGTCATGATTCCACAAGATGAGTACCCAGAAATCAACTTTGTGGGGCTGCTCATCGGGCCCAGAGGGAACACCC  490
            |||.|||||.||.|||||.||.||.|||||||||||.|||||||||||.||.||.||.||||||||||||||||
Sbjct  739  AGTAATGATCCCCCAAGACGAATATCCAGAAATCAATTTTGTGGGGCTCCTAATTGGACCCAGAGGGAACACCC  812

Query  491  TGAAGAACATAGAGAAGGAGTGCAATGCCAAGATTATGATCCGGGGGAAAGGGTCTGTGAAAGAAGGGAAGGTT  564
            ||||||||||.||||||||.|||||.||||||||.|||||.|||||||||||.||.||||||||||||||.|||
Sbjct  813  TGAAGAACATTGAGAAGGAATGCAACGCCAAGATCATGATTCGGGGGAAAGGATCAGTGAAAGAAGGGAAAGTT  886

Query  565  GGGCGCAAAGATGGCCAGATGTTGCCAGGAGAAGATGAGCCACTTCATGCCCTGGTTACTGCCAATACAATGGA  638
            |||||.||||||||.||||||||||||||.|||||||||||.||||||||.||.||.|||||||||||.|||||
Sbjct  887  GGGCGTAAAGATGGTCAGATGTTGCCAGGCGAAGATGAGCCTCTTCATGCTCTAGTCACTGCCAATACGATGGA  960

Query  639  GAACGTCAAAAAGGCAGTGGAACAGATAAGAAACATCCTGAAGCAGGGTATCGAGACTCCAGAGGACCAGAATG  712
            |||.||||||||||||||.||||||||.|||||||||||||||||||||||.|||||.||||||||||||||.|
Sbjct  961  GAATGTCAAAAAGGCAGTAGAACAGATCAGAAACATCCTGAAGCAGGGTATTGAGACCCCAGAGGACCAGAACG  1034

Query  713  ATCTACGGAAGATGCAGCTTCGGGAGTTGGCTCGCTTAAATGGGACCCTTCGGGAAGACGATAACAGGATCTTA  786
            ||||||||||.|||||||||||.||||||||||||||.|||||.||.||.||||||||.|||||.|||||||||
Sbjct 1035  ATCTACGGAAAATGCAGCTTCGAGAGTTGGCTCGCTTGAATGGCACTCTACGGGAAGATGATAATAGGATCTTA  1108

Query  787  AGACCCTGGCAGAGCTCAGAGACCCGCAGCATTACCAACACCACAGTGTGTACCAAGTGTGGAGGGGCTGGCCA  860
            ||.||||||||||||||||||||.||||||||||||||.||.||.||||||||||||||||||||||||||.||
Sbjct 1109  AGGCCCTGGCAGAGCTCAGAGACGCGCAGCATTACCAATACTACTGTGTGTACCAAGTGTGGAGGGGCTGGTCA  1182

Query  861  CATTGCTTCAGACTGTAAATTCCAAAGGCCTGGTGATCCTCAGTCAGCTCAGGATAAAGCACGGATGGATAAAG  934
            |||||||||.||.||.|||||.||.||||||||.||.|||||||||||||||||||||||||||||||||||||
Sbjct 1183  CATTGCTTCTGATTGCAAATTTCAGAGGCCTGGCGACCCTCAGTCAGCTCAGGATAAAGCACGGATGGATAAAG  1256

Query  935  AATATTTGTCCCTCATGGCTGAACTGGGTGAAGCACCTGTCCCAGCATCTGTGGGCTCCACCTCTGGGCCTGCC  1008
            |||||||||||||.||||||||.||.||.|||||.||||||||.||||||||||||||.|||||||||||||||
Sbjct 1257  AATATTTGTCCCTTATGGCTGAGCTAGGGGAAGCTCCTGTCCCTGCATCTGTGGGCTCTACCTCTGGGCCTGCC  1330

Query 1009  ACCACACCCCTGGCCAGCGCACCTCGTCCTGCTGCTCCCGCCAACAACCCACCTCCACCGTCTCTCATGTCTAC  1082
            |||||.||||||||.||.|||||..|.|||||||||||.||||.|||||||||.||||||||||||||||||||
Sbjct 1331  ACCACGCCCCTGGCTAGTGCACCAAGACCTGCTGCTCCTGCCAGCAACCCACCACCACCGTCTCTCATGTCTAC  1404

Query 1083  CACCCAGAGCCGCCCACCCTGGATGAATTCTGGCCCTTCAGAGAGTCGGCCCTACCACGGCATGCATGGAGGTG  1156
            .||.|||||||||||||||||||||||||||||.||||||||||.||||||||||||.||||||||||||||||
Sbjct 1405  AACTCAGAGCCGCCCACCCTGGATGAATTCTGGTCCTTCAGAGAATCGGCCCTACCATGGCATGCATGGAGGTG  1478

Query 1157  GTCCTGGTGGGCCCGGAGGTGGCCCCCACAGCTTCCCACACCCATTACCCAGCCTGACAGGTGGGCATGGTGGA  1230
            ||||||||||.||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.
Sbjct 1479  GTCCTGGTGGTCCTGGAGGTGGCCCCCACAGCTTCCCACACCCATTACCCAGCCTGACAGGTGGGCATGGTGGG  1552

Query 1231  CATCCCATGCAGCACAACCCCAATGGACCCCCACCCCCTTGGATGCAGCCACCACCACCACCGATGAACCAGGG  1304
            ||||||||||||||||||||.||||||||.|||||.||||||||||||||||||||||||||||||||||||||
Sbjct 1553  CATCCCATGCAGCACAACCCAAATGGACCACCACCACCTTGGATGCAGCCACCACCACCACCGATGAACCAGGG  1626

Query 1305  CCCCCACCCTCCTGGGCACCATGGCCCTCCTCCAATGG----ATCAGTACCTGGGAAGTACGCCTGTGGGCTCT  1374
            |||||||||.||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||
Sbjct 1627  CCCCCACCCACCTGGGCACCATGGCCCTCCTCCAATGGGTAAATCAGTACCTGGGAAGTACGCCTGTGGGCTCT  1700

Query 1375  GGGGTCTATCGCCTGCATCAAGGAAAAGGTATGATGCCGCCACCACCTATGGGCATGATGCCGCCGCCGCCGCC  1448
            |||||||||||||||||||||||||||||||||||||||||.||.|||||||||||||||||||||||.|||||
Sbjct 1701  GGGGTCTATCGCCTGCATCAAGGAAAAGGTATGATGCCGCCGCCGCCTATGGGCATGATGCCGCCGCCTCCGCC  1774

Query 1449  GCCTCCCAGTGGGCAGCCCCCACCCCCTCCCTCTGGTCCTCTTCCCCCATGGCAACAACAGCAGCAGCAGCCTC  1522
            .||||||||||||||||||||.||.||||||||||||||||||||.||||||||.||.||||||||||||||||
Sbjct 1775  ACCTCCCAGTGGGCAGCCCCCGCCTCCTCCCTCTGGTCCTCTTCCTCCATGGCAGCAGCAGCAGCAGCAGCCTC  1848

Query 1523  CGCCACCCCCTCCGCCCAGCAGCAGTATGGCTTCCAGTACCCCCTTGCCATGGCAGCAAA----GA----TCCC  1588
            |||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||    ||    |.||
Sbjct 1849  CGCCACCCCCTCCGCCCAGCAGCAGTATGGCTTCCAGCACCCCCTTGCCATGGCAGCAAAATACGACGACTACC  1922

Query 1589  TCCCCGCGGCGGCGATGG------------CCCGAGCCATG-----AG----AGTGAGGACTTTCCGC-GC---  1637
            .||.||    .|||.|||            |||  ||||||     ||    || |.||  .|.|||| ||   
Sbjct 1923  ACCACG----AGCGCTGGCACAGGGTCCATCCC--GCCATGGCAACAGCAGCAG-GCGG--CTGCCGCAGCTTC  1987

Query 1638  -CCATTGG------------------------------------------------------------------  1644
             |||  ||                                                                  
Sbjct 1988  TCCA--GGAACCCCTCAGATGCAAGGCAACCCCACTATGGTGCCCCTGCCCCCCGGGGTCCAGCCGCCTCTGCC  2059

Query 1645  --------------------------------------------------------------------------  1644
                                                                                      
Sbjct 2060  GCCCGGGGCCCCTCCCCCTCCGCCGCCTCCGCCACCTGGTTCCGCCGGCATGATGTATGCCCCACCCCCTCCTC  2133

Query 1645  --------------------------------------------------------------------------  1644
                                                                                      
Sbjct 2134  CTCCGCCTCCCATGGACCCTTCTAACTTTGTCACCATGATGGGCATGGGGGTGGCGGGCATGCCGCCCTTCGGG  2207

Query 1645  --------------------------------------------------------------------------  1644
                                                                                      
Sbjct 2208  ATGCCTCCAGCTCCCCCACCGCCTCCACCACAGAACTAGACTTGTTTTTTTTTTTTTAAGAAAATATATATTAT  2281

Query 1645  --------------------------------------------------------------------------  1644
                                                                                      
Sbjct 2282  ATACATAGAGAGTTGGTCTCTTATAAACACACGCCGAACCTCACCATATGGAGCCAGACATTGGGATGCACGCA  2355

Query 1645  --------------------------------------------------------------------------  1644
                                                                                      
Sbjct 2356  TGTGATTGTGTGTGCACGCATGTGTGTGTGTGCACGCACTGGGCTGGGCCAAGTGACTGGACTCGCTTGGGAAA  2429

Query 1645  --------------------------------------------------------------------------  1644
                                                                                      
Sbjct 2430  CGGGCAGTGGTAGTGGGGCGCCAGCTTGAGCTTTCCTGGCACCTGTAGCATCGAGTGTCTTCTTTGTCTTCTCT  2503

Query 1645  --------------------------------------------------------------------------  1644
                                                                                      
Sbjct 2504  CCTCACCCAACTCCCTCTGCCTCTCCCCAAACCGGGCCGCCAGGATCCCTCCCCGCGGCAGCGATGGCCCGAGC  2577

Query 1645  --------------------------------------------------------------------------  1644
                                                                                      
Sbjct 2578  CATGAGAGTGAGGACTTTCCGCGCCCATTGGTGACCCTTCCAGGCAGACAGCCTCAGCAGCGCCCCTGGTGGAC  2651

Query 1645  --------------------------------------------------------------------------  1644
                                                                                      
Sbjct 2652  AGGATGGTTCGGCAAAGCAGCCTGAGTTATTTTTGTGGACGGAATCGGAACACACTGGCTCCATATTGTGAAAT  2725

Query 1645  --------------------------------------------------------------------------  1644
                                                                                      
Sbjct 2726  TTTTATTAATTTTTATCTTTTTCCTTTGTTATTTCCTTATCTTTTCCTTTCTTCAGACTCCGTCCAAGGAGATG  2799

Query 1645  --------------------------------------------------------------------------  1644
                                                                                      
Sbjct 2800  CTCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCCTTGTCTCCATTCCTCTCCTCCCAAAGGGAGAGGGGCA  2873

Query 1645  --------------------------------------------------------------------------  1644
                                                                                      
Sbjct 2874  AATGGTTTAGGTACAGGCTTTGGCTATTAATGTCAGGCTTGGTGGTGGGAGTGGGGGGTCCTATGGTTCTAATT  2947

Query 1645  --------------------------------------------------------------------------  1644
                                                                                      
Sbjct 2948  GTTGAAGGGCTTCAGCCACATTCAAAATAAGTAGGTGGTTTATCTTTGACATCTTTTAAAGAGTCTGGATAAAT  3021

Query 1645  --------------------------------------------------------------------------  1644
                                                                                      
Sbjct 3022  CTGACTCGTTGCTCAATAGGGTTTATTTGGCAGTGGGATTCACATCTTCCTGCACTCCTGCCAGCAGTACAGGG  3095

Query 1645  --------------------------------------------------------------------------  1644
                                                                                      
Sbjct 3096  CACAGCCCAAGCCACCATAGGCCAGCCTGGAGTCTTTTTCATGCTCTGGTCACCCAAGCTGCCTCAGAACCCAT  3169

Query 1645  --------------------------------------------------------------------------  1644
                                                                                      
Sbjct 3170  TTGCTTCTCTCCTTCCTGGAAAGCTTCCCTTTATGTTTTATTTTGACCCCAGATGTCCAGATGTTTTGCAGTGT  3243

Query 1645  --------------------------------------------------------------------------  1644
                                                                                      
Sbjct 3244  CTGGGGCTTGTGTCCCTTGTTCTTCGTTCTGCTGCTTTGCCCCTTCCTTCCCTCTTCATGGAGTGATTATGTTG  3317

Query 1645  --------------------------------------------------------------------------  1644
                                                                                      
Sbjct 3318  ATAATAATGTGTAATGCGCGTTCTTTTCACTGGTTTATCTACAGAAATTTCTCTGGGCCTTTTTTTCTGTGTTT  3391

Query 1645  --------------------------------------------------------------------------  1644
                                                                                      
Sbjct 3392  GATTCAACACTGCACTAAGGGGGAAATGTTCCATTGAATAAAAGAGCAGTGTGGTTTTCCGGGTCCGTTTCTTT  3465

Query 1645  --------------------------------------------------------------------------  1644
                                                                                      
Sbjct 3466  TCTTTTAAAACCTTTTTCCTGACCATCAGCACCAAGTTTTACCTACCTACCCTGGCCCCAGCTCCTGCATGTGA  3539

Query 1645  --------------------------------------------------------------------------  1644
                                                                                      
Sbjct 3540  ATGGCTTCAGCCCCTCACTTTTTCTAGTTTCTAGTTGATAGAACTGAAAAGCAGGCTCACTCCACATTTCAGGA  3613

Query 1645  --------------------------------------------------------------------------  1644
                                                                                      
Sbjct 3614  GTCTTTGTCATTGTGACAGCCTTTTCCTGGGGCTCCGACCCCCACCCACATTGATGAGCTCTAGATAGGATTTG  3687

Query 1645  --------------------------------------------------------------------------  1644
                                                                                      
Sbjct 3688  TGTCTCCTAGCTGCTGCCCGACTTAAGGACCTGGACCTGGGGAGGCATCAGCACTAAAGGTCACGCTAACTAAT  3761

Query 1645  --------------------------------------------------------------------------  1644
                                                                                      
Sbjct 3762  CCTGCTTGTCGGGCACAGAGCTGCTAAAATTAAAACTGCCAAGTGGCTTTTTTTCTTTCTCTGCTGGTGGCTCT  3835

Query 1645  --------------------------------------------------------------------------  1644
                                                                                      
Sbjct 3836  CAGCCTGCCAGGACTGCAGGTCTAGGGGAGTAGTAGGGACAAAACGTGGTGCCCTGTGCTGAGTGGCCACGTCT  3909

Query 1645  --------------------------------------------------------------------------  1644
                                                                                      
Sbjct 3910  ACAGAGTCTTCTGCAGTTCTCCTGTTTAGGGTACTAGGAAAATCACCCCTTGTGTCTTTGTGAGAGCCACGTCT  3983

Query 1645  --------------------------------------------------------------------------  1644
                                                                                      
Sbjct 3984  TTGGCAGCTCATACAGCTGCTGCTGCTTTGTCTAGAGGCTTGAGGGCAGTTGCTGTCTACCCTTAGGCTTCCTA  4057

Query 1645  --------------------------------------------------------------------------  1644
                                                                                      
Sbjct 4058  ACCAAGCCCTCAACTAGAGGTTTTCCCTATTGTCTTTAACCTTACAGTGTGGGGGCAGGGCCTGGCCACCCTCT  4131

Query 1645  --------------------------------------------------------------------------  1644
                                                                                      
Sbjct 4132  TCGACCTTGGCTTTACCTCATTGCTTCCCTCACAATCTTGGTTTCCCTGGTGGGCTCATTGGGCGGTTAATTAG  4205

Query 1645  --------------------------------------------------------------------------  1644
                                                                                      
Sbjct 4206  CTCTTTGAAGCTCTGGAAGCGGCAAAGTGGCGCTGTGTGGGTTTTAGAAGTAAAATCAATAAATGACTTAACCA  4279

Query 1645  ----------  1644
                      
Sbjct 4280  TGGCTCAGCC  4289

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