Nucleotide Global Alignment
Description
- Query:
- TRCN0000469808
- Subject:
- NR_122118.1
- Aligned Length:
- 4376
- Identities:
- 1430
- Gaps:
- 2819
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGTCCGCGCAGTAACAAGGAGTGCGCGCTGCGACACCTCCCAGTTCCCCCGGCCCCGCCGCCATTTCGTCGCCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGCCTAACGGTTCGGCCAATCCCGACCCATATTGAAAAGAGCCAGTGCTCCACCAATCGGAGGCCGCTGCCTCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GACCTCACCTCGGGCCGGCCCAATCCAGGCCGCGGCCCCTCCGCCCCGAGCCCGCCCCCGCGGCGTCCTTTCTC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CTCCCTCTTTGTGCGTCTGGCGCCGCCGCCGCCCGCCGCGTGAGAGGACGGGCTCCCCGCGCTCTTCAGCCGCG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TAGTCGGGTCCCCTCCCCCCCACCTCCAGCTCCCGGAAGGTTCGTGAAGGAGAAGTCGCCGCGGAGGACGAGGA 370
Query 1 ----------------------------ATGGCGACCGGAGCGAACGCCACGCCGTTGGACTTCCCAAGTAAGA 46
|||||||||||||||||||||||||||.||||||||||||||||||
Sbjct 371 ACCGCTGCTGCCGGTCCCCTGGGGCGCCATGGCGACCGGAGCGAACGCCACGCCGCTGGACTTCCCAAGTAAGA 444
Query 47 AGCGGAAGAGGAGCCGCTGGAACCAAGACACAATGGAACAGAAGACAGTGATTCCAGGAATGCCTACAGTTATT 120
||.|||||||||||||.||||||||||||||||||||.||||||||||||||||||||.||||||||||||||.
Sbjct 445 AGAGGAAGAGGAGCCGATGGAACCAAGACACAATGGAGCAGAAGACAGTGATTCCAGGCATGCCTACAGTTATA 518
Query 121 CCCCCTGGACTTACTCGAGAACAAGAAAGAGCTTATATAGTGCAACTGCAGATAGAAGACCTGACTCGTAAACT 194
|||||||||||.|||||.|||||.|||||||||||.||
Sbjct 519 CCCCCTGGACTGACTCGGGAACAGGAAAGAGCTTACAT------------------------------------ 556
Query 195 GCGCACAGGAGACCTGGGCATCCCCCCTAACCCTGAGGACAGGTCCCCTTCCCCTGAGCCCATCTACAATAGCG 268
|||||||||||||||||.||.||||||||.||||
Sbjct 557 ----------------------------------------AGGTCCCCTTCCCCTGAACCAATCTACAACAGCG 590
Query 269 AGGGGAAGCGGCTTAACACCCGAGAGTTCCGCACCCGCAAAAAGCTGGAAGAGGAGCGGCACAACCTCATCACA 342
|||||||||||||||||||.|||||||||||.||||||||||||||.||||||||||||||||.|||.||.|||
Sbjct 591 AGGGGAAGCGGCTTAACACTCGAGAGTTCCGTACCCGCAAAAAGCTTGAAGAGGAGCGGCACACCCTTATTACA 664
Query 343 GAGATGGTTGCACTCAATCCGGATTTCAAGCCACCTGCAGATTACAAACCTCCAGCAACACGTGTGAGTGATAA 416
|||||||||||.|||||.||.||.||.||.|||||||||||||||||.||||||||||||||||||||.|||||
Sbjct 665 GAGATGGTTGCTCTCAACCCAGACTTTAAACCACCTGCAGATTACAAGCCTCCAGCAACACGTGTGAGCGATAA 738
Query 417 AGTCATGATTCCACAAGATGAGTACCCAGAAATCAACTTTGTGGGGCTGCTCATCGGGCCCAGAGGGAACACCC 490
|||.|||||.||.|||||.||.||.|||||||||||.|||||||||||.||.||.||.||||||||||||||||
Sbjct 739 AGTAATGATCCCCCAAGACGAATATCCAGAAATCAATTTTGTGGGGCTCCTAATTGGACCCAGAGGGAACACCC 812
Query 491 TGAAGAACATAGAGAAGGAGTGCAATGCCAAGATTATGATCCGGGGGAAAGGGTCTGTGAAAGAAGGGAAGGTT 564
||||||||||.||||||||.|||||.||||||||.|||||.|||||||||||.||.||||||||||||||.|||
Sbjct 813 TGAAGAACATTGAGAAGGAATGCAACGCCAAGATCATGATTCGGGGGAAAGGATCAGTGAAAGAAGGGAAAGTT 886
Query 565 GGGCGCAAAGATGGCCAGATGTTGCCAGGAGAAGATGAGCCACTTCATGCCCTGGTTACTGCCAATACAATGGA 638
|||||.||||||||.||||||||||||||.|||||||||||.||||||||.||.||.|||||||||||.|||||
Sbjct 887 GGGCGTAAAGATGGTCAGATGTTGCCAGGCGAAGATGAGCCTCTTCATGCTCTAGTCACTGCCAATACGATGGA 960
Query 639 GAACGTCAAAAAGGCAGTGGAACAGATAAGAAACATCCTGAAGCAGGGTATCGAGACTCCAGAGGACCAGAATG 712
|||.||||||||||||||.||||||||.|||||||||||||||||||||||.|||||.||||||||||||||.|
Sbjct 961 GAATGTCAAAAAGGCAGTAGAACAGATCAGAAACATCCTGAAGCAGGGTATTGAGACCCCAGAGGACCAGAACG 1034
Query 713 ATCTACGGAAGATGCAGCTTCGGGAGTTGGCTCGCTTAAATGGGACCCTTCGGGAAGACGATAACAGGATCTTA 786
||||||||||.|||||||||||.||||||||||||||.|||||.||.||.||||||||.|||||.|||||||||
Sbjct 1035 ATCTACGGAAAATGCAGCTTCGAGAGTTGGCTCGCTTGAATGGCACTCTACGGGAAGATGATAATAGGATCTTA 1108
Query 787 AGACCCTGGCAGAGCTCAGAGACCCGCAGCATTACCAACACCACAGTGTGTACCAAGTGTGGAGGGGCTGGCCA 860
||.||||||||||||||||||||.||||||||||||||.||.||.||||||||||||||||||||||||||.||
Sbjct 1109 AGGCCCTGGCAGAGCTCAGAGACGCGCAGCATTACCAATACTACTGTGTGTACCAAGTGTGGAGGGGCTGGTCA 1182
Query 861 CATTGCTTCAGACTGTAAATTCCAAAGGCCTGGTGATCCTCAGTCAGCTCAGGATAAAGCACGGATGGATAAAG 934
|||||||||.||.||.|||||.||.||||||||.||.|||||||||||||||||||||||||||||||||||||
Sbjct 1183 CATTGCTTCTGATTGCAAATTTCAGAGGCCTGGCGACCCTCAGTCAGCTCAGGATAAAGCACGGATGGATAAAG 1256
Query 935 AATATTTGTCCCTCATGGCTGAACTGGGTGAAGCACCTGTCCCAGCATCTGTGGGCTCCACCTCTGGGCCTGCC 1008
|||||||||||||.||||||||.||.||.|||||.||||||||.||||||||||||||.|||||||||||||||
Sbjct 1257 AATATTTGTCCCTTATGGCTGAGCTAGGGGAAGCTCCTGTCCCTGCATCTGTGGGCTCTACCTCTGGGCCTGCC 1330
Query 1009 ACCACACCCCTGGCCAGCGCACCTCGTCCTGCTGCTCCCGCCAACAACCCACCTCCACCGTCTCTCATGTCTAC 1082
|||||.||||||||.||.|||||..|.|||||||||||.||||.|||||||||.||||||||||||||||||||
Sbjct 1331 ACCACGCCCCTGGCTAGTGCACCAAGACCTGCTGCTCCTGCCAGCAACCCACCACCACCGTCTCTCATGTCTAC 1404
Query 1083 CACCCAGAGCCGCCCACCCTGGATGAATTCTGGCCCTTCAGAGAGTCGGCCCTACCACGGCATGCATGGAGGTG 1156
.||.|||||||||||||||||||||||||||||.||||||||||.||||||||||||.||||||||||||||||
Sbjct 1405 AACTCAGAGCCGCCCACCCTGGATGAATTCTGGTCCTTCAGAGAATCGGCCCTACCATGGCATGCATGGAGGTG 1478
Query 1157 GTCCTGGTGGGCCCGGAGGTGGCCCCCACAGCTTCCCACACCCATTACCCAGCCTGACAGGTGGGCATGGTGGA 1230
||||||||||.||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.
Sbjct 1479 GTCCTGGTGGTCCTGGAGGTGGCCCCCACAGCTTCCCACACCCATTACCCAGCCTGACAGGTGGGCATGGTGGG 1552
Query 1231 CATCCCATGCAGCACAACCCCAATGGACCCCCACCCCCTTGGATGCAGCCACCACCACCACCGATGAACCAGGG 1304
||||||||||||||||||||.||||||||.|||||.||||||||||||||||||||||||||||||||||||||
Sbjct 1553 CATCCCATGCAGCACAACCCAAATGGACCACCACCACCTTGGATGCAGCCACCACCACCACCGATGAACCAGGG 1626
Query 1305 CCCCCACCCTCCTGGGCACCATGGCCCTCCTCCAATGG----ATCAGTACCTGGGAAGTACGCCTGTGGGCTCT 1374
|||||||||.|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1627 CCCCCACCCACCTGGGCACCATGGCCCTCCTCCAATGGGTAAATCAGTACCTGGGAAGTACGCCTGTGGGCTCT 1700
Query 1375 GGGGTCTATCGCCTGCATCAAGGAAAAGGTATGATGCCGCCACCACCTATGGGCATGATGCCGCCGCCGCCGCC 1448
|||||||||||||||||||||||||||||||||||||||||.||.|||||||||||||||||||||||.|||||
Sbjct 1701 GGGGTCTATCGCCTGCATCAAGGAAAAGGTATGATGCCGCCGCCGCCTATGGGCATGATGCCGCCGCCTCCGCC 1774
Query 1449 GCCTCCCAGTGGGCAGCCCCCACCCCCTCCCTCTGGTCCTCTTCCCCCATGGCAACAACAGCAGCAGCAGCCTC 1522
.||||||||||||||||||||.||.||||||||||||||||||||.||||||||.||.||||||||||||||||
Sbjct 1775 ACCTCCCAGTGGGCAGCCCCCGCCTCCTCCCTCTGGTCCTCTTCCTCCATGGCAGCAGCAGCAGCAGCAGCCTC 1848
Query 1523 CGCCACCCCCTCCGCCCAGCAGCAGTATGGCTTCCAGTACCCCCTTGCCATGGCAGCAAA----GA----TCCC 1588
|||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||| || |.||
Sbjct 1849 CGCCACCCCCTCCGCCCAGCAGCAGTATGGCTTCCAGCACCCCCTTGCCATGGCAGCAAAATACGACGACTACC 1922
Query 1589 TCCCCGCGGCGGCGATGG------------CCCGAGCCATG-----AG----AGTGAGGACTTTCCGC-GC--- 1637
.||.|| .|||.||| ||| |||||| || || |.|| .|.|||| ||
Sbjct 1923 ACCACG----AGCGCTGGCACAGGGTCCATCCC--GCCATGGCAACAGCAGCAG-GCGG--CTGCCGCAGCTTC 1987
Query 1638 -CCATTGG------------------------------------------------------------------ 1644
||| ||
Sbjct 1988 TCCA--GGAACCCCTCAGATGCAAGGCAACCCCACTATGGTGCCCCTGCCCCCCGGGGTCCAGCCGCCTCTGCC 2059
Query 1645 -------------------------------------------------------------------------- 1644
Sbjct 2060 GCCCGGGGCCCCTCCCCCTCCGCCGCCTCCGCCACCTGGTTCCGCCGGCATGATGTATGCCCCACCCCCTCCTC 2133
Query 1645 -------------------------------------------------------------------------- 1644
Sbjct 2134 CTCCGCCTCCCATGGACCCTTCTAACTTTGTCACCATGATGGGCATGGGGGTGGCGGGCATGCCGCCCTTCGGG 2207
Query 1645 -------------------------------------------------------------------------- 1644
Sbjct 2208 ATGCCTCCAGCTCCCCCACCGCCTCCACCACAGAACTAGACTTGTTTTTTTTTTTTTAAGAAAATATATATTAT 2281
Query 1645 -------------------------------------------------------------------------- 1644
Sbjct 2282 ATACATAGAGAGTTGGTCTCTTATAAACACACGCCGAACCTCACCATATGGAGCCAGACATTGGGATGCACGCA 2355
Query 1645 -------------------------------------------------------------------------- 1644
Sbjct 2356 TGTGATTGTGTGTGCACGCATGTGTGTGTGTGCACGCACTGGGCTGGGCCAAGTGACTGGACTCGCTTGGGAAA 2429
Query 1645 -------------------------------------------------------------------------- 1644
Sbjct 2430 CGGGCAGTGGTAGTGGGGCGCCAGCTTGAGCTTTCCTGGCACCTGTAGCATCGAGTGTCTTCTTTGTCTTCTCT 2503
Query 1645 -------------------------------------------------------------------------- 1644
Sbjct 2504 CCTCACCCAACTCCCTCTGCCTCTCCCCAAACCGGGCCGCCAGGATCCCTCCCCGCGGCAGCGATGGCCCGAGC 2577
Query 1645 -------------------------------------------------------------------------- 1644
Sbjct 2578 CATGAGAGTGAGGACTTTCCGCGCCCATTGGTGACCCTTCCAGGCAGACAGCCTCAGCAGCGCCCCTGGTGGAC 2651
Query 1645 -------------------------------------------------------------------------- 1644
Sbjct 2652 AGGATGGTTCGGCAAAGCAGCCTGAGTTATTTTTGTGGACGGAATCGGAACACACTGGCTCCATATTGTGAAAT 2725
Query 1645 -------------------------------------------------------------------------- 1644
Sbjct 2726 TTTTATTAATTTTTATCTTTTTCCTTTGTTATTTCCTTATCTTTTCCTTTCTTCAGACTCCGTCCAAGGAGATG 2799
Query 1645 -------------------------------------------------------------------------- 1644
Sbjct 2800 CTCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCCTTGTCTCCATTCCTCTCCTCCCAAAGGGAGAGGGGCA 2873
Query 1645 -------------------------------------------------------------------------- 1644
Sbjct 2874 AATGGTTTAGGTACAGGCTTTGGCTATTAATGTCAGGCTTGGTGGTGGGAGTGGGGGGTCCTATGGTTCTAATT 2947
Query 1645 -------------------------------------------------------------------------- 1644
Sbjct 2948 GTTGAAGGGCTTCAGCCACATTCAAAATAAGTAGGTGGTTTATCTTTGACATCTTTTAAAGAGTCTGGATAAAT 3021
Query 1645 -------------------------------------------------------------------------- 1644
Sbjct 3022 CTGACTCGTTGCTCAATAGGGTTTATTTGGCAGTGGGATTCACATCTTCCTGCACTCCTGCCAGCAGTACAGGG 3095
Query 1645 -------------------------------------------------------------------------- 1644
Sbjct 3096 CACAGCCCAAGCCACCATAGGCCAGCCTGGAGTCTTTTTCATGCTCTGGTCACCCAAGCTGCCTCAGAACCCAT 3169
Query 1645 -------------------------------------------------------------------------- 1644
Sbjct 3170 TTGCTTCTCTCCTTCCTGGAAAGCTTCCCTTTATGTTTTATTTTGACCCCAGATGTCCAGATGTTTTGCAGTGT 3243
Query 1645 -------------------------------------------------------------------------- 1644
Sbjct 3244 CTGGGGCTTGTGTCCCTTGTTCTTCGTTCTGCTGCTTTGCCCCTTCCTTCCCTCTTCATGGAGTGATTATGTTG 3317
Query 1645 -------------------------------------------------------------------------- 1644
Sbjct 3318 ATAATAATGTGTAATGCGCGTTCTTTTCACTGGTTTATCTACAGAAATTTCTCTGGGCCTTTTTTTCTGTGTTT 3391
Query 1645 -------------------------------------------------------------------------- 1644
Sbjct 3392 GATTCAACACTGCACTAAGGGGGAAATGTTCCATTGAATAAAAGAGCAGTGTGGTTTTCCGGGTCCGTTTCTTT 3465
Query 1645 -------------------------------------------------------------------------- 1644
Sbjct 3466 TCTTTTAAAACCTTTTTCCTGACCATCAGCACCAAGTTTTACCTACCTACCCTGGCCCCAGCTCCTGCATGTGA 3539
Query 1645 -------------------------------------------------------------------------- 1644
Sbjct 3540 ATGGCTTCAGCCCCTCACTTTTTCTAGTTTCTAGTTGATAGAACTGAAAAGCAGGCTCACTCCACATTTCAGGA 3613
Query 1645 -------------------------------------------------------------------------- 1644
Sbjct 3614 GTCTTTGTCATTGTGACAGCCTTTTCCTGGGGCTCCGACCCCCACCCACATTGATGAGCTCTAGATAGGATTTG 3687
Query 1645 -------------------------------------------------------------------------- 1644
Sbjct 3688 TGTCTCCTAGCTGCTGCCCGACTTAAGGACCTGGACCTGGGGAGGCATCAGCACTAAAGGTCACGCTAACTAAT 3761
Query 1645 -------------------------------------------------------------------------- 1644
Sbjct 3762 CCTGCTTGTCGGGCACAGAGCTGCTAAAATTAAAACTGCCAAGTGGCTTTTTTTCTTTCTCTGCTGGTGGCTCT 3835
Query 1645 -------------------------------------------------------------------------- 1644
Sbjct 3836 CAGCCTGCCAGGACTGCAGGTCTAGGGGAGTAGTAGGGACAAAACGTGGTGCCCTGTGCTGAGTGGCCACGTCT 3909
Query 1645 -------------------------------------------------------------------------- 1644
Sbjct 3910 ACAGAGTCTTCTGCAGTTCTCCTGTTTAGGGTACTAGGAAAATCACCCCTTGTGTCTTTGTGAGAGCCACGTCT 3983
Query 1645 -------------------------------------------------------------------------- 1644
Sbjct 3984 TTGGCAGCTCATACAGCTGCTGCTGCTTTGTCTAGAGGCTTGAGGGCAGTTGCTGTCTACCCTTAGGCTTCCTA 4057
Query 1645 -------------------------------------------------------------------------- 1644
Sbjct 4058 ACCAAGCCCTCAACTAGAGGTTTTCCCTATTGTCTTTAACCTTACAGTGTGGGGGCAGGGCCTGGCCACCCTCT 4131
Query 1645 -------------------------------------------------------------------------- 1644
Sbjct 4132 TCGACCTTGGCTTTACCTCATTGCTTCCCTCACAATCTTGGTTTCCCTGGTGGGCTCATTGGGCGGTTAATTAG 4205
Query 1645 -------------------------------------------------------------------------- 1644
Sbjct 4206 CTCTTTGAAGCTCTGGAAGCGGCAAAGTGGCGCTGTGTGGGTTTTAGAAGTAAAATCAATAAATGACTTAACCA 4279
Query 1645 ---------- 1644
Sbjct 4280 TGGCTCAGCC 4289
