Nucleotide Global Alignment
Description
- Query:
- TRCN0000469828
- Subject:
- NR_134936.2
- Aligned Length:
- 4206
- Identities:
- 1353
- Gaps:
- 2841
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACACAAGACGCCGGAGCTTCACAAGGGAGCGAACGAGGTAAGCAGCAGGCGCGGACAGGTAATCCCCAGCGGGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGCAGGGCCACCACCCTCTGTCCGACCCAGCCGGAGCCCGACCTGCGAGGCTGGCCGGGCATGTCCCCTCGGCG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCCTGTGCTACCAGGGCCAATCTCCGCCCGGAGACCGGTCCCTGACGCCGGGTGTTTATAAGAATGGAAGTGTT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GTTTCCTTGCCCGATTCCTTCATGCTATATCTCATGAACCTCTGTAATCTTGGGGGAGAGACTATATTTAATGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGACAAACCTGTCACCAGTGTAGCAACAACAGTGTGAGGACAAAAGCAAATAAAAATTAAGAAGCGTTCAAATT 370
Query 1 ---------------------------------------------------------ATGAACCGATACACAAC 17
|||||||||||||||||
Sbjct 371 TATATTCAACAAGGAAGTCATTTCAATCAACAACTTCTGCTGCATTATTTTTCCAAGATGAACCGATACACAAC 444
Query 18 CATGAGACAGTTGGGGGACGGCACGTATGGGAGTGTGCTTATGGGCAAGAGTAATGAATCCGGGGAGCTGGTGG 91
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CATGAGACAGTTGGGGGACGGCACGTATGGGAGTGTGCTTATGGGCAAGAGTAATGAATCCGGGGAGCTGGTGG 518
Query 92 CCATCAAAAGGATGAAGAGAAAGTTCTATTCTTGGGATGAATGCATGAACTTGAGAGAAGTTAAGTCTCTGAAG 165
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CCATCAAAAGGATGAAGAGAAAGTTCTATTCTTGGGATGAATGCATGAACTTGAGAGAAGTTAAGTCTCTGAAG 592
Query 166 AAACTTAATCATGCCAATGTTATTAAATTGAAAGAAGTTATCAGAGAAAATGACCATCTTTATTTTATATTTGA 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 AAACTTAATCATGCCAATGTTATTAAATTGAAAGAAGTTATCAGAGAAAATGACCATCTTTATTTTATATTTGA 666
Query 240 ATATATGAAAGAAAACCTCTATCAATTAATGAAAGACAGAAACAAGTTGTTCCCTGAATCAGTCATCAGAAATA 313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 ATATATGAAAGAAAACCTCTATCAATTAATGAAAGACAGAAACAAGTTGTTCCCTGAATCAGTCATCAGAAATA 740
Query 314 TTATGTATCAAATATTGCAAGGGCTGGCTTTTATCCATAAACATGGCTTTTTTCATAGGGACATGAAACCAGAA 387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TTATGTATCAAATATTGCAAGGGCTGGCTTTTATCCATAAACATGGCTTTTTTCATAGGGACATGAAACCAGAA 814
Query 388 AACTTGCTTTGTATGGGTCCAGAGCTTGTGAAAATTGCTGATTTTGGACTTGCAAGAGAATTAAGGTCACAGCC 461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 AACTTGCTTTGTATGGGTCCAGAGCTTGTGAAAATTGCTGATTTTGGACTTGCAAGAGAATTAAGGTCACAGCC 888
Query 462 ACCATACACTGATTATGTATCTACCAGATGGTATCGTGCCCCTGAAGTTTTACTGAGATCTTCAGTTTATAGTT 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 ACCATACACTGATTATGTATCTACCAGATGGTATCGTGCCCCTGAAGTTTTACTGAGATCTTCAGTTTATAGTT 962
Query 536 CTCCCATTGATGTGTGGGCTGTTGGAAGTATCATGGCTGAACTCTATATGTTAAGGCCACTTTTCCCAGGGACA 609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CTCCCATTGATGTGTGGGCTGTTGGAAGTATCATGGCTGAACTCTATATGTTAAGGCCACTTTTCCCAGGGACA 1036
Query 610 AGTGAGGTCGATGAAATCTTTAAAATTTGCCAAGTTTTAGGGACTCCCAAAAAAAGTGACTGGCCAGAAGGATA 683
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 AGTGAGGTCGATGAAATCTTTAAAATTTGCCAAGTTTTAGGGACTCCCAAAAAAAGTGACTGGCCAGAAGGATA 1110
Query 684 CCAGCTGGCATCCTCTATGAACTTCCGTTTTCCCCAGTGTGTTCCTATAAACTTAAAAACTCTTATTCCCAATG 757
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 CCAGCTGGCATCCTCTATGAACTTCCGTTTTCCCCAGTGTGTTCCTATAAACTTAAAAACTCTTATTCCCAATG 1184
Query 758 CCAGTAATGAAGCTATTCAGCTCATGACCGAAATGTTGAATTGGGATCCAAAGAAACGACCGACAGCAAGCCAG 831
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 CCAGTAATGAAGCTATTCAGCTCATGACCGAAATGTTGAATTGGGATCCAAAGAAACGACCGACAGCAAGCCAG 1258
Query 832 GCATTGAAACACCCATATTTTCAAGTTGGTCAGGTATTAGGCCCTTCGTCAAATCATCTGGAATCAAAACAGTC 905
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 GCATTGAAACACCCATATTTTCAAGTTGGTCAGGTATTAGGCCCTTCGTCAAATCATCTGGAATCAAAACAGTC 1332
Query 906 TTTAAATAAGCAGCTGCAACCATTAGAATCAAAGCCATCTTTAGTTGAGGTAGAGCCTAAGCCTCTGCCGGATA 979
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 TTTAAATAAGCAGCTGCAACCATTAGAATCAAAGCCATCTTTAGTTGAGGTAGAGCCTAAGCCTCTGCCGGATA 1406
Query 980 TAATCGATCAGGTTGTTGGACAACCCCAGCCAAAAACTAGCCAGCAGCCACTGCAGCCCATTCAGCCGCCACAG 1053
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 TAATCGATCAGGTTGTTGGACAACCCCAGCCAAAAACTAGCCAGCAGCCACTGCAGCCCATTCAGCCGCCACAG 1480
Query 1054 AACCTGAGCGTCCAGCAACCTCCAAAGCAACAGAGTCAGGAGAAACCGCCACAAACGCTATTCCCGAGCATCGT 1127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 AACCTGAGCGTCCAGCAACCTCCAAAGCAACAGAGTCAGGAGAAACCGCCACAAACGCTATTCCCGAGCATCGT 1554
Query 1128 CAAAAACATGCCAACTAAGCCAAATGGCACACTGAGTCATAAAAGTGGTAGGAGGCGTTGGGGTCAGACTATCT 1201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 CAAAAACATGCCAACTAAGCCAAATGGCACACTGAGTCATAAAAGTGGTAGGAGGCGTTGGGGTCAGACTATCT 1628
Query 1202 TCAAGTCTGGAGATAGCTGGGAAGAGTTGGAGGACTATGATTTCGGAGCCTCCCATTCCAAGAAGCCAAGCATG 1275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 TCAAGTCTGGAGATAGCTGGGAAGAGTTGGAGGACTATGATTTCGGAGCCTCCCATTCCAAGAAGCCAAGCATG 1702
Query 1276 GGTGTTTTTAAAGAAAAAAGGAAAAAAGATTCTCCATTTCG--------------------------------- 1316
|||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 GGTGTTTTTAAAGAAAAAAGGAAAAAAGATTCTCCATTTCGGCTTCCAGAGCCAGTACCCTCAGGCTCCAACCA 1776
Query 1317 -TCAACAGGTGAAGA------------TGGCTGTTATTTCCCTCTCAGCACACCAGTTTCCCA--CGTTA---- 1371
||.|||||.|||.| | |||||||.|||||| .|.|.|.|.||||.| .||.|
Sbjct 1777 CTCGACAGGGGAAAACAAGAGCTTACCT-GCTGTTACTTCCCT-----AAAATCTGATTCCGAATTGTCAACTG 1844
Query 1372 -------------------------------------------------------------------------- 1371
Sbjct 1845 CTCCAACCTCTAAACAGTACTACTTGAAACAATCAAGATATCTTCCAGGGCAGCATGACATTATACTACAAGGA 1918
Query 1372 -------------------------------------------------------------------------- 1371
Sbjct 1919 CTGGCGGATCTGTGACACTGGCCTTCAGGGAAAGAGACGCAAGAGTCATAGTTACTGACCTGCTACTACTAACC 1992
Query 1372 -------------------------------------------------------------------------- 1371
Sbjct 1993 GGCTGTGTACTTGGAGCAAGATTCTGTTTTCTGTAACTTACGATGGGACTGCACCATCTGTCAGCTCACTCTGT 2066
Query 1372 -------------------------------------------------------------------------- 1371
Sbjct 2067 GTGAATCCCAAGAAGGTGTCCTTGATAGCCAGTGGAAAGGAAATAAACCCCCACACTTGGAGCAACCAGTTATT 2140
Query 1372 -------------------------------------------------------------------------- 1371
Sbjct 2141 CCCCAAGTCACTGGGACCCGTTGGGGCAGAACTTGCTTTCAAAAGGAGCAATGCAGGAAATCTTGGAAGTTATG 2214
Query 1372 -------------------------------------------------------------------------- 1371
Sbjct 2215 CTACTTACAATCAGTCAGGATATATTCCTTCCTTTCTCAAAAAAGAAGTGCAGTCAGCTGGCCAGAGGATCCAC 2288
Query 1372 -------------------------------------------------------------------------- 1371
Sbjct 2289 TTAGCACCTCTCAATGCAACGGCTTCAGAATATACCTGGAACACAAAAACTGGTCGGGGGCAGTTTTCAGGACG 2362
Query 1372 -------------------------------------------------------------------------- 1371
Sbjct 2363 TACTTATAATCCTACAGCAAAAAACCTAAATATTGTGAACCGTGCACAGCCCATTCCCTCAGTGCATGGGAGGA 2436
Query 1372 -------------------------------------------------------------------------- 1371
Sbjct 2437 CAGACTGGGTGGCCAAGTATGGAGGCCACCGGTAGGAGTCTATGGTGTGAAACCCTACAGCATTGCTCCGTAGA 2510
Query 1372 -------------------------------------------------------------------------- 1371
Sbjct 2511 GTACGTGCAAGTTCCTTGACCCTGGGAAATGTCTACAAATGTCTATTTCTACTGAGTTCTGGAAGAAATATGCA 2584
Query 1372 -------------------------------------------------------------------------- 1371
Sbjct 2585 AAAGTGGGTACTTGGAAGGGCAAAAATCATCCCCTATTTTACTTATTTCCAAGAAATGCATTTTCTTAGCATCA 2658
Query 1372 -------------------------------------------------------------------------- 1371
Sbjct 2659 TTGCCCACAGTGTTGATATATGGGTAGGATGTTACAAAGTATTGAATAAACTATTTGCCAAAGTATGAAGTATT 2732
Query 1372 -------------------------------------------------------------------------- 1371
Sbjct 2733 TGATCTACAATTTAATAAATAGTAAATCCAATAAGAACCCTTAAAAAAAAACAACTTCCAGAAAATGTTTAGAG 2806
Query 1372 -------------------------------------------------------------------------- 1371
Sbjct 2807 TGTTTTAGTTTTCATTTGTTGTATGTGCCCAAATGGTTTAGTAGTTCTTCACTTTGCTGTGGTTGGCTTAAGAG 2880
Query 1372 -------------------------------------------------------------------------- 1371
Sbjct 2881 GTTTGTCTTTTGTTTTTGTACAGCAGTTGGGCCAACCTTTGCTGGCTGTCAGCTGTGGTTCTTATTTGACTAAG 2954
Query 1372 -------------------------------------------------------------------------- 1371
Sbjct 2955 GCTCTGCGCTGCCATTTTGTCAATGACAGAAAGATTGCAATTATTTGTTTTTCTACTTTGAAGCTATGGGAGCG 3028
Query 1372 -------------------------------------------------------------------------- 1371
Sbjct 3029 ATGGTAATTTCAATCTTGAGCAGGATATCTTTTTTTTTTTTTTTGAGGCGATGTTTCACTCTTGTGTCCAGGCT 3102
Query 1372 -------------------------------------------------------------------------- 1371
Sbjct 3103 GGAGTGCAGTGGCACTATCTTGGCTTACTGCAACCTCCACCTCCTGGGTTCAAGTGATTCTCCTGCCTCAGCCT 3176
Query 1372 -------------------------------------------------------------------------- 1371
Sbjct 3177 CCCGAGTAGCTGGGATTAGAGGCGTGTGCCACCATGCCTGGCTAATTTTTGTAGTATTAGTAGAGACAGGGTTT 3250
Query 1372 -------------------------------------------------------------------------- 1371
Sbjct 3251 CACCATGTTGGTCAGGCTCAGGCTGGTCTCAAACTCCTGACCTCAGGTGATCCACCTGCCTCGGCCTCCCAAAG 3324
Query 1372 -------------------------------------------------------------------------- 1371
Sbjct 3325 TGCAGGGCTTACAGGTGTGAGCCACAGTGCCCAGCTTTTTTTTTTTTTTTTTAGAAATAAATTTATCTTTAACA 3398
Query 1372 -------------------------------------------------------------------------- 1371
Sbjct 3399 TAGAGAATATCAAAGTTATGCCACTTGATTTTAGTGGACGGCTTGTGTTTTGATCTTGACCAGTACAGTTCCCA 3472
Query 1372 -------------------------------------------------------------------------- 1371
Sbjct 3473 TGAATTCAAGGTGACAATCAAGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGG 3546
Query 1372 -------------------------------------------------------------------------- 1371
Sbjct 3547 ACATCATTAAGAAAGTTCTGGAAACTGTGTTTGTTTGATGCTGGTTCATTGGACTTTTCAAATTGTTTTGTTTC 3620
Query 1372 -------------------------------------------------------------------------- 1371
Sbjct 3621 TGTGTCCCTACCAGACACAAAGATGAAGTGTGCCAGCTGGTTCCCCCAAGCCAGCTCATGCTGCTGACCACTGA 3694
Query 1372 -------------------------------------------------------------------------- 1371
Sbjct 3695 CTCAGCTCTGACCTTCACATTTGCTCTGAAGCAAGTGCGTTCAGCTGCTGGGGCAGTGATATCACATAGTACAT 3768
Query 1372 -------------------------------------------------------------------------- 1371
Sbjct 3769 ATATTATTTCCTTAGTTTATTTCCAAACTGGTATTTTAAATAGACACTTCGAACTTTGGGCTACTCTGTTTAAA 3842
Query 1372 -------------------------------------------------------------------------- 1371
Sbjct 3843 TCTGCCACTTTCTGGACTGGACCTTAGTACTGTAAATTCTTTTTAAAGAATAATAATGTTACCAACTGCTGAGA 3916
Query 1372 -------------------------------------------------------------------------- 1371
Sbjct 3917 TTTTTATGTATTTTGTGACTTTGTAACAACTGCTATTGTAATAAGTGTCATCTTGTGGGCATTATACAAAGGCA 3990
Query 1372 -------------------------------------------------------------------------- 1371
Sbjct 3991 TATTATAAAATAATAATGATATTTTTGTATAGAAGAGTCAACTGTTCAGATGTAAGATGTTGAAAAATGTTAAA 4064
Query 1372 -------------------------------------------------------------------------- 1371
Sbjct 4065 ATCTAAAGAGTAATTTATCCTAGTGGTAATGGTTATATGTATTTGTACAGTTTAAATTAATGTCTCAAAGCTGT 4138
Query 1372 -------------------------------------------------------------- 1371
Sbjct 4139 GCAGTCTTTTGTTACTGGGACACTTTTAAACTCTGAATAGGCATTAAAAAAAATATGGCTAA 4200
