Nucleotide Global Alignment
Description
- Query:
- TRCN0000469829
- Subject:
- XR_001749696.2
- Aligned Length:
- 4341
- Identities:
- 1331
- Gaps:
- 3009
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TTCCGTCCCGCCCCGCCGCCGGTGCAGTGTTGGAAGCTCCGGTTCTCCCGGAAGTGGCCCAGGTCTCTCTGTCG 74
Query 1 -----------------------------------------------ATGGCGGAGGCGGCGCTGTTGCTGCTG 27
|||||||||||||||||||||||||||
Sbjct 75 GGGTCCCCTCCATCTCGCTGCTGCTGAAGGCCGCGAGGGCGGCGGCGATGGCGGAGGCGGCGCTGTTGCTGCTG 148
Query 28 CCTGAGGCGGCGGCGGAGCGGGACGCTAGGGAAAAGCTGGCTCTCTGGGATCGGAGACCGGACACGACGGCGCC 101
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CCTGAGGCGGCGGCGGAGCGGGACGCTAGGGAAAAGCTGGCTCTCTGGGATCGGAGACCGGACACGACGGCGCC 222
Query 102 GCTGACCGACAGGCAGACGGACTCGGTATTGGAGCTGAAGGCGGCGGCAGAGAACTTGCCGGTGCCAGCTGAGC 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GCTGACCGACAGGCAGACGGACTCGGTATTGGAGCTGAAGGCGGCGGCAGAGAACTTGCCGGTGCCAGCTGAGC 296
Query 176 TTCCAATTGAAGACTTGTGCAGTTTAACATCCCAGTCACTGCCCATTGAACTGACTTCAGTAGTGCCTGAATCT 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TTCCAATTGAAGACTTGTGCAGTTTAACATCCCAGTCACTGCCCATTGAACTGACTTCAGTAGTGCCTGAATCT 370
Query 250 ACAGAAGACATTCTCTTGAAGGGCTTCACTTCCTTAGGAATGGAAGAAGAAAGAATTGAAACCGCACAGCAGTT 323
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 ACAGAAGACATTCTCTTGAAGGGCTTCACTTCCTTAGGAATGGAAGAAGAAAGAATTGAAACCGCACAGCAGTT 444
Query 324 TTTCTCATGGTTTGCAAAGCTGCAAACTCAGATGGATCAAGATGAAGGAACTAAATATAGACAGATGAGGGATT 397
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TTTCTCATGGTTTGCAAAGCTGCAAACTCAGATGGATCAAGATGAAGGAACTAAATATAGACAGATGAGGGATT 518
Query 398 ACTTGTCTGGGTTTCAGGAGCAGTGTGATGCTATATTGAATGATGTAAACAGTGCTCTTCAGCATCTGGAGTCT 471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 ACTTGTCTGGGTTTCAGGAGCAGTGTGATGCTATATTGAATGATGTAAACAGTGCTCTTCAGCATCTGGAGTCT 592
Query 472 TTGCAGAAACAGTATCTTTTTGTGTCCAATAAGACAGGAACCCTACATGAAGCCTGTGAACAGCTCCTAAAAGA 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TTGCAGAAACAGTATCTTTTTGTGTCCAATAAGACAGGAACCCTACATGAAGCCTGTGAACAGCTCCTAAAAGA 666
Query 546 ACAGTCGGAACTTGTTGATCTGGCTGAAAACATTCAACAAAAGCTTTCCTATTTTAACGAATTGGAAACTATTA 619
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 ACAGTCGGAACTTGTTGATCTGGCTGAAAACATTCAACAAAAGCTTTCCTATTTTAACGAATTGGAAACTATTA 740
Query 620 ACACAAAATTGAATTCCCCTACATTGTCGGTGAATAGTGACGGATTTATACCTATGCTGGCCAAGTTAGATGAT 693
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 ACACAAAATTGAATTCCCCTACATTGTCGGTGAATAGTGACGGATTTATACCTATGCTGGCCAAGTTAGATGAT 814
Query 694 TGTATAACATATATCTCATCTCATCCTAATTTTAAAGATTATCCCATATATTTGCTGAAGTTTAAACAGTGTCT 767
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TGTATAACATATATCTCATCTCATCCTAATTTTAAAGATTATCCCATATATTTGCTGAAGTTTAAACAGTGTCT 888
Query 768 TTCTAAAGCTTTGCACCTCATGAAGACATATACTGTGAACACACTACAGACCCTCACAAGTCAGTTACTGAAAA 841
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 TTCTAAAGCTTTGCACCTCATGAAGACATATACTGTGAACACACTACAGACCCTCACAAGTCAGTTACTGAAAA 962
Query 842 GGGATCCTTCATCTGTACCTAATGCAGACAATGCCTTCACATTATTTTATGTGAAATTTCGAGCTGCTGCCCCC 915
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GGGATCCTTCATCTGTACCTAATGCAGACAATGCCTTCACATTATTTTATGTGAAATTTCGAGCTGCTGCCCCC 1036
Query 916 AAAGTCAGAACTCTTATTGAACAAATAGAACTGCGGTCTGAAAAAATACCTGAATACCAACAACTGCTAAATGA 989
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 AAAGTCAGAACTCTTATTGAACAAATAGAACTGCGGTCTGAAAAAATACCTGAATACCAACAACTGCTAAATGA 1110
Query 990 TATCCACCAGTGTTACCTTGATCAGCGGGAGCTCCTTTTGGGCCCTAGTATTGCTTGCACTGTTGCAGAGTTAA 1063
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 TATCCACCAGTGTTACCTTGATCAGCGGGAGCTCCTTTTGGGCCCTAGTATTGCTTGCACTGTTGCAGAGTTAA 1184
Query 1064 CCAGCCAAAATAATAGAGATCACTGTGCCTTGGTTCGTAGTGGCTGTGCCTTCATGGTTCATGTCTGCCAGGAT 1137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 CCAGCCAAAATAATAGAGATCACTGTGCCTTGGTTCGTAGTGGCTGTGCCTTCATGGTTCATGTCTGCCAGGAT 1258
Query 1138 GAACACCAACTTTACAATGAATTTTTCACAAAACCAACATCAAAATTAGATGAGCTTTTGGAGAAACTGTGTGT 1211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 GAACACCAACTTTACAATGAATTTTTCACAAAACCAACATCAAAATTAGATGAGCTTTTGGAGAAACTGTGTGT 1332
Query 1212 GTCATTGTATGATGTCTTCAGGCCATTGATCATTCATGTTATTCACTTAGAGACTCTGTCGGAACTTTGTGGGA 1285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 GTCATTGTATGATGTCTTCAGGCCATTGATCATTCATGTTATTCACTTAGAGACTCTGTCGGAACTTTGTGGGA 1406
Query 1286 TTCTTAAAAATGAAGTGCTTGAAGATCATGTGCAGAACAATG-------------GT---AAA----------- 1332
|||||||||||||.|||||||||||||||||||||||||||| || |||
Sbjct 1407 TTCTTAAAAATGAGGTGCTTGAAGATCATGTGCAGAACAATGCAGATTGCACAGAGTTTGAAAGATGAACAGAA 1480
Query 1333 -------------------------------------------------------------------------- 1332
Sbjct 1481 GAAGGTACCTTCAGAAGCTTCATTTTCAGATGTTCACTTAGAAGAAGGAGAGTCTAACAGTCTGACAAAATCTG 1554
Query 1333 -------------------------------------------------------------------------- 1332
Sbjct 1555 GTTCAACAGAATCCCTCAATCCTAGACCACAGACCACAATTTCTCCAGCAGATCTTCATGGAATGTGGTATCCT 1628
Query 1333 -------------------------------------------------------------------------- 1332
Sbjct 1629 ACGGTTCGAAGAACTCTTGTCTGTCTCTCCAAATTATACAGATGCATAGATAGGGCAGTGTTCCAAGGATTATC 1702
Query 1333 -------------------------------------------------------------------------- 1332
Sbjct 1703 ACAGGAAGCATTGTCTGCCTGCATTCAGTCCTTACTTGGAGCGTCAGAGTCTATCAGCAAAAACAAGACTCAGA 1776
Query 1333 -------------------------------------------------------------------------- 1332
Sbjct 1777 TTGATGGACAACTTTTCTTAATTAAGCACCTTTTGATACTTCGTGAACAAATTGCTCCATTTCACACTGAATTC 1850
Query 1333 -------------------------------------------------------------------------- 1332
Sbjct 1851 ACCATTAAGGAAATTTCCCTGGACCTCAAGAAAACTAGAGATGCAGCATTTAAAATCCTGAACCCTATGACTGT 1924
Query 1333 -------------------------------------------------------------------------- 1332
Sbjct 1925 CCCAAGATTTTTTAGGCTGAATAGCAACAATGCCTTGATAGAGTTCTTGTTGGAGGGTACTCCTGAGATAAGAG 1998
Query 1333 -------------------------------------------------------------------------- 1332
Sbjct 1999 AACATTATCTTGACTCTAAAAAAGACGTAGACCGTCATCTGAAATCGGCCTGTGAGCAGTTTATTCAGCAGCAG 2072
Query 1333 -------------------------------------------------------------------------- 1332
Sbjct 2073 ACCAAGCTGTTTGTAGAACAGCTGGAGGAGTTCATGACAAAGGTTTCAGCGTTAAAAACAATGGCCAGTCAGGG 2146
Query 1333 -------------------------------------------------------------------------- 1332
Sbjct 2147 AGGCCCCAAGTATACTCTCTCACAGCAGCCTTGGGCACAACCAGCAAAGGTCAATGACCTTGCGGCAACTGCAT 2220
Query 1333 -------------------------------------------------------------------------- 1332
Sbjct 2221 ATAAGACAATAAAAACAAAGCTGCCTGTGACATTGAGAAGTATGTCCTTGTACCTATCCAATAAAGATACCGAG 2294
Query 1333 -------------------------------------------------------------------------- 1332
Sbjct 2295 TTCATCTTGTTTAAACCTGTGAGGAATAATATTCAGCAAGTCTTCCAGAAGTTCCACGCTCTGTTAAAGGAAGA 2368
Query 1333 -------------------------------------------------------------------------- 1332
Sbjct 2369 GTTCAGCCCTGAAGACATCCAGATCATTGCCTGTCCATCTATGGAACAGCTGAGCCTTCTGCTGTTGGTTTCTA 2442
Query 1333 -------------------------------------------------------------------------- 1332
Sbjct 2443 AATAAGCAGGCCAGCCGGGCTGTGCACCTAAATGTCTGTCTGGGAGGAGCAGGCTGAGAAGTCTTGCAGTCTGC 2516
Query 1333 -------------------------------------------------------------------------- 1332
Sbjct 2517 AGGACACCGAGGAATCGTATGTGGGAACGTCCCCGAGAACCACACGAGCGTGCTGCTCAGTGCTGACTGCAGAA 2590
Query 1333 -------------------------------------------------------------------------- 1332
Sbjct 2591 TGAAATAGAAGCAAAGTGTTACAGGATCAGTGTTTTCTTTTCTAAAACATCAAAATGCCAAAGATTAATCTGTG 2664
Query 1333 -------------------------------------------------------------------------- 1332
Sbjct 2665 ATTGGTGATAACTGCCTCGTTTAAATGGTCACAAGAAATGTGAAGAGAGAGCTAGGGCAGACATGCAGTGAAAT 2738
Query 1333 -------------------------------------------------------------------------- 1332
Sbjct 2739 GGTTCTTTGTTAAAAATGTGCAATAAAAATAGATTACAATAAGTAGTGCAAAGAACTTTACAGAAATCAAGCGA 2812
Query 1333 -------------------------------------------------------------------------- 1332
Sbjct 2813 ATTAGAAGGCCTGTAAGAGTAAGGTTTGCTAAAACGTGAAACACTGTAACACTTTTAACCACTGAGCATTCCAC 2886
Query 1333 -------------------------------------------------------------------------- 1332
Sbjct 2887 AGTGAAATGTTATTTCTATGCTCTTATTTAATGTAATGTTTCTCCTGTCATTTTTGAAGTTGAGTTTGGAGTAG 2960
Query 1333 -------------------------------------------------------------------------- 1332
Sbjct 2961 ATTGGTTGCTTCTGAGAACACATTCTGCCTTCCTGGGAAGTCGGGGTGTCATCCTTTCCTCTGTTTGATGTGAG 3034
Query 1333 -------------------------------------------------------------------------- 1332
Sbjct 3035 GTAGTTTAAAGATACAAGGACTTTGTGTGAAGCTCCAGCATCTGTGCCCCTTGAATTGCTTAGGTGCAGACAGT 3108
Query 1333 -------------------------------------------------------------------------- 1332
Sbjct 3109 TCTAAAGCAAGGAGCTGCAGCATTCTCATCATAGATACGTGCAGTATCTTTAATGAGTATCTTCATGGTATGAT 3182
Query 1333 -------------------------------------------------------------------------- 1332
Sbjct 3183 AGTGTGTGTTTGTGAGTGCGAAGTACCAATTAAGGTGTCTTAAATTTGGCGCATAGAGGAGAGAAGGAAACCTG 3256
Query 1333 -------------------------------------------------------------------------- 1332
Sbjct 3257 AGGAGTAGTGTTCCTCCTGAATGAAGGTTCAGGTCACCAGCCTTCTGTACACTGCCTTTGGTTTTAGCAGTTCT 3330
Query 1333 -------------------------------------------------------------------------- 1332
Sbjct 3331 TTGAAAAGCAAACACTTTCATGTCCTGTCTATTCATTCAGCTGGCTGTGCTGTGCTGTGGACCAGCTGTGTGGA 3404
Query 1333 -------------------------------------------------------------------------- 1332
Sbjct 3405 TCTCTAGCCCAGCTACAGCAGAATACATTTTACCAGCAAACCTAAGGATGACAAACACTATCCACATCTGAAAA 3478
Query 1333 -------------------------------------------------------------------------- 1332
Sbjct 3479 CTACCACACCATATCAGGGATCATAAATTATGCATATCTATGAATTTTCCAACAAATTCCTACTTCCTGATTGG 3552
Query 1333 -------------------------------------------------------------------------- 1332
Sbjct 3553 ATTGGTTTTGCCGCTGATGTTAAGGCAGCCAGCTTCTTAGTTCAAAAAGAATTCTGAGTTTTTCAAACACTAGT 3626
Query 1333 -------------------------------------------------------------------------- 1332
Sbjct 3627 CTAGAGGTGGACATTGTCAGGGGTTCTGGAATGGGACCAGGGGACCTTTTGGTGCAGTGGGTGCCTGTAACTCA 3700
Query 1333 -------------------------------------------------------------------------- 1332
Sbjct 3701 TTAGACGTACTGAGGCAGCACTTCTGCAGGGTGCATACCCTGATTGTTGTCATTTGTAACAGGTCACTTCCTTT 3774
Query 1333 -------------------------------------------------------------------------- 1332
Sbjct 3775 TCACTCAGTTTAAATTGGTGATGGACGTTGCTTGATTGAGCTTATTACTCTCTATTTTGAGAAGGTAGAAGGTA 3848
Query 1333 -------------------------------------------------------------------------- 1332
Sbjct 3849 AGAGGGCCCATATTCATTCTTTGCCATGAAATGAATGAATTAGGAAGATTGTATTTACTTAACTGTTTTTTAAA 3922
Query 1333 -------------------------------------------------------------------------- 1332
Sbjct 3923 TACATGTTTAATGAAATAAACTGTAAAATATCCAGTTTTGTGTATTATATGTACATTTGATTTTTAATAGCCTT 3996
Query 1333 -------------------------------------------------------------------------- 1332
Sbjct 3997 TCCAAAGAAATGAGGGCATGATTATTGTACAGTAAGTACGTGACTGATTTAATTTGATTTACAGAGCGGAGTGT 4070
Query 1333 -------------------------------------------------------------------------- 1332
Sbjct 4071 GTTCTTATAAAAATATTTAATGACATTGGTTCTTGTCTTTTGATCTTTTATTTCTGAAACACTCAAACACCTTA 4144
Query 1333 -------------------------------------------------------------------------- 1332
Sbjct 4145 CAAAGTGCTGAGTAGGTAATAGTGACCCAACTTGTTTGCTAAATGATTATTTGTTTAAATCTGTACAGTTTTAA 4218
Query 1333 -------------------------------------------------------------------------- 1332
Sbjct 4219 GTGTTCACTTATACAAAGAGTGTATATACTTTCAAATAATTTAAAATGCTTTATATTATTTGGCTAGAAATTGC 4292
Query 1333 ------------------------------------------------- 1332
Sbjct 4293 TGTTTTTAATAAATGTGAATTTTTTAAAAATAAAGATTTTTGCTTCCTA 4341
